Extensive recombination among human immunodeficiency virus type 1 quasispecies makes an important contribution to viral diversity in individual patients (Q22242225)

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English	Extensive recombination among human immunodeficiency virus type 1 quasispecies makes an important contribution to viral diversity in individual patients	scientific article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Extensive recombination among human immunodeficiency virus type 1 quasispecies makes an important contribution to viral diversity in individual patients (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

0 references

0 references

viral quasispecies

1 reference

based on heuristic

inferred from title

0 references

1 reference

based on heuristic

inferred from title

Charlotte Charpentier

1

object named as

Charlotte Charpentier

author given names

Charlotte

author last names

Charpentier

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Olivier Tenaillon

3

object named as

Olivier Tenaillon

author given names

Olivier

author last names

Tenaillon

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

François Clavel

4

object named as

François Clavel

author given names

François

author last names

Clavel

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

5

object named as

Allan J Hance

author given names

Allan J

author last names

Hance

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

author name string

Tamara Nora

2

author given names

Tamara

author last names

Nora

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

language of work or name

0 references

publication date

1 March 2006

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

number of pages

11

1 reference

based on heuristic

inferred from page(s)

Journal of Virology

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

80

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

2472-2482

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Sex increases the efficacy of natural selection in experimental yeast populations

1 reference

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19 March 2017

Evidence for Positive Epistasis in HIV-1

1 reference

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19 March 2017

The causes and consequences of HIV evolution

1 reference

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19 March 2017

EVOLUTION OF SEXRESOLVING THE PARADOX OF SEX AND RECOMBINATION

1 reference

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19 March 2017

DnaSP, DNA polymorphism analyses by the coalescent and other methods

1 reference

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19 March 2017

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

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19 March 2017

High levels of HIV-1 in plasma during all stages of infection determined by competitive PCR

1 reference

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19 March 2017

On the number of segregating sites in genetical models without recombination

1 reference

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19 March 2017

Effect of a protease inhibitor-induced genetic bottleneck on human immunodeficiency virus type 1 env gene populations

1 reference

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12 September 2017

HIV dynamics with multiple infections of target cells

1 reference

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12 September 2017

Update of the Drug Resistance Mutations in HIV-1: 2005.

1 reference

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12 September 2017

Mechanisms of nonrandom human immunodeficiency virus type 1 infection and double infection: preference in virus entry is important but is not the sole factor

1 reference

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12 September 2017

Genetic recombination of human immunodeficiency virus type 1 in one round of viral replication: effects of genetic distance, target cells, accessory genes, and lack of high negative interference in crossover events

1 reference

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12 September 2017

Pervasive genomic recombination of HIV-1 in vivo

1 reference

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12 September 2017

Antiretroviral drug resistance mutations in human immunodeficiency virus type 1 reverse transcriptase increase template-switching frequency

1 reference

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12 September 2017

Dimerization of retroviral RNA genomes: an inseparable pair.

1 reference

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12 September 2017

Role of minority populations of human immunodeficiency virus type 1 in the evolution of viral resistance to protease inhibitors.

1 reference

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12 September 2017

Dynamics of HIV-1 recombination in its natural target cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1395372

12 September 2017

Nonrandom HIV-1 infection and double infection via direct and cell-mediated pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1395372

12 September 2017

High rates of human immunodeficiency virus type 1 recombination: near-random segregation of markers one kilobase apart in one round of viral replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1395372

12 September 2017

Human immunodeficiency virus type 1 genetic recombination is more frequent than that of Moloney murine leukemia virus despite similar template switching rates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1395372

12 September 2017

Recombination in evolutionary genomics

1 reference

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12 September 2017

Human immunodeficiency virus type 1 recombination: rate, fidelity, and putative hot spots

1 reference

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12 September 2017

A coalescent-based method for detecting and estimating recombination from gene sequences

1 reference

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12 September 2017

Two-locus sampling distributions and their application

1 reference

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12 September 2017

Mechanisms of retroviral recombination

1 reference

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12 September 2017

High rate of recombination throughout the human immunodeficiency virus type 1 genome

1 reference

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12 September 2017

Stochastic processes strongly influence HIV-1 evolution during suboptimal protease-inhibitor therapy

1 reference

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12 September 2017

Recombination leads to the rapid emergence of HIV-1 dually resistant mutants under selective drug pressure.

1 reference

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12 September 2017

Quantitation of human immunodeficiency virus type 1 infection kinetics

1 reference

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12 September 2017

Persistence of four related human immunodeficiency virus subtypes during the course of zidovudine therapy: relationship between virion RNA and proviral DNA.

1 reference

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12 September 2017

Identification of human immunodeficiency virus type 1 envelope genes recombinant between subtypes B and F in two epidemiologically linked individuals from Brazil.

1 reference

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Viral DNA synthesized in vitro by avian retrovirus particles permeabilized with melittin. II. Evidence for a strand displacement mechanism in plus-strand synthesis

1 reference

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12 September 2017

Genetic consequences of packaging two RNA genomes in one retroviral particle: pseudodiploidy and high rate of genetic recombination

1 reference

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12 September 2017

Retroviral Recombination and Reverse Transcription

1 reference

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12 September 2017

Dimerization of human immunodeficiency virus (type 1) RNA: stimulation by cations and possible mechanism

1 reference

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12 September 2017

Structure, Replication, and Recombination of Retrovirus Genomes: Some Unifying Hypotheses

1 reference

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12 September 2017

Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences

1 reference

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27 September 2017

Retracing the evolutionary pathways of human immunodeficiency virus type 1 resistance to protease inhibitors: virus fitness in the absence and in the presence of drug

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27 September 2017

Stimulation and suppression of PCR-mediated recombination

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27 September 2017

Rapid, Transient Changes at the env Locus of Plasma Human Immunodeficiency Virus Type 1 Populations during the Emergence of Protease Inhibitor Resistance

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27 September 2017

DNA recombination during PCR.

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27 September 2017

Bounds on the minimum number of recombination events in a sample history.

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30 May 2018

Analysis of env sequence evolution in human immunodeficiency virus-infected patients receiving therapy with nonnucleoside reverse-transcriptase inhibitors

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30 May 2018

Human immunodeficiency virus type 1 population bottleneck during indinavir therapy causes a genetic drift in the env quasispecies

1 reference

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30 May 2018

Independent evolution of the env and pol genes of HIV-1 during zidovudine therapy.

1 reference

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30 May 2018

Factors underlying spontaneous inactivation and susceptibility to neutralization of human immunodeficiency virus

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30 May 2018

In vivo characteristics of human immunodeficiency virus type 1 intersubtype recombination: determination of hot spots and correlation with sequence similarity

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29 November 2018

Evolution of human immunodeficiency virus type 1 envelope sequences in infected individuals with differing disease progression profiles.

1 reference

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29 November 2018

Evolution of zidovudine resistance-associated genotypes in human immunodeficiency virus type 1-infected patients

1 reference

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29 November 2018

Biological and molecular characterization of subtype D, G, and A/D recombinant HIV-1 transmissions in Sweden

1 reference

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29 November 2018

Non-random usage of 'degenerate' codons is related to protein three-dimensional structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474154

12 December 2020

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Testing Significance of Incongruence

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https://api.crossref.org/works/10.1128%2FJVI.80.5.2472-2482.2006

7 January 2021

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10.1128/JVI.80.5.2472-2482.2006

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

ResearchGate publication ID

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