BioTuring Browser
Explore hundreds of curated single-cell transcriptome datasets, along with your own data, through interactive visualizations and analytics. The software also supports multimodal omics, CITE-seq, TCR-seq, and spatial transcriptomic. Interactively explore the world's largest single-cell expression database. Access and query insights from a single-cell database of millions of cells, fully annotated with cell type labels and experimental metadata. Not just creating a gateway to published works, BioTuring Browser is an end-to-end solution for your own single-cell data. Import your fastq files, count matrices, Seurat, or Scanpy objects, and reveal the biological stories inside them. Get a rich package of visualizations and analyses in an intuitive interface, making insight mining from any curated or in-house single-cell dataset become such a breeze. Import single-cell CRISPR screening or Perturb-seq data, and query guide RNA sequences.
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GenomeStudio
Visualize and analyze data generated on Illumina array platforms with GenomeStudio Software. This powerful solution supports the genotyping analysis of microarray data. Performance-optimized tools and a user-friendly graphical interface enable you to convert data into meaningful results quickly and easily. Analyze SNP and CNV data across 5 million markers and probes. Detect sample outliers. Analyze differentially expressed genes across different genomes. Profile miRNA expression. Combine mRNA and microRNA data in a single project. Detect cytosine methylation at single-base resolution. Identify methylation signatures across the entire genome. At Illumina, our goal is to apply innovative technologies to the analysis of genetic variation and function, making studies possible that were not even imaginable just a few years ago. It is mission critical for us to deliver innovative, flexible, and scalable solutions to meet the needs of our customers.
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VarSeq
Simple, fast, and repeatable variant analysis software for gene panels, exomes, and whole genomes. VarSeq is an intuitive, integrated software solution for tertiary analysis. With VarSeq you can automate your workflows and analyze variants for gene panels, exomes, and whole genomes. Understanding genomic data has never been easier thanks to our software. VarSeq software provides a powerful filtering and annotation engine to sift through large variant data sets. Using a chain of filters, you can quickly narrow your list of variants down to those that are most likely to be of interest. After determining the parameters that work well for your analysis, you can save the state of your filters so that you can easily apply the same analysis to another dataset. The same automated workflow can be used for each batch of samples, making VarSeq an ideal solution for high-throughput environments. Real-time filtering gives you the power to quickly prototype and tune analysis workflows.
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OmnibusX
In the world of biological data science, navigating vast and complex datasets can be a daunting task. Our software toolkit is designed to empower you by accelerating analysis, promoting accessibility, and providing comprehensive visualization tools to help you make sense of these intricate biological datasets.
Our platform is built with data accessibility at its core. With just a few clicks, you can gain seamless access to extensive, high-dimensional biological datasets, including bulk RNA-seq, single-cell RNA-seq, scATAC-seq, spatial RNA-seq, and metagenome-seq. This allows you to focus less on data wrangling and more on analysis and discovery.
Our integrated standard processing pipeline includes the latest tools for standard data processing. From normalization and batch correction to PCA, t-SNE, UMAP, clustering, cell type prediction, TCR/BCR, genome browser, and beyond, our pipeline is designed to streamline your workflow and provide you with reliable, reproducible results.
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