A wrapper for Apache UIMA (http://incubator.apache.org/uima/) that connects to the Open Biomedical Annotator (OBA) rest service from the National Center for Biomedical Ontology (http://www.bioontology.org/wiki/index.php/Annotator_User_Guide).

Features

  • Submits text to the OBA rest service and creates UIMA annotations
  • OBA rest service parameters are configurable
  • UIMA installation is not necessary as the maven build installs UIMA dependencies
  • Sample UIMA pipeline configuration is provided

Project Activity

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Categories

Bio-Informatics

License

Public Domain

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Additional Project Details

Intended Audience

Science/Research

Programming Language

Java

Related Categories

Java Bio-Informatics Software

Registered

2010-03-12
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