LiDSiM

LiDSiM is a tool to estimate the possible influence of error-tolerant database searches and proteogenomic approaches on the amount of unidentified spectra and the ratios of taxonomic relationship of identified spectra in MS/MS studies of microbial proteomes.

For more details about LiDSiM and its functioning, please see

"Estimating the Computational Limits of Detection of Microbial Non-Model Organisms"
Mathias Kuhring and Bernhard Y. Renard
(http://onlinelibrary.wiley.com/doi/10.1002/pmic.201400598/abstract)

PLEASE NOTE, it is recommended to read the paper and the readme.txt file before using LiDSiM.

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License

BSD License

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Additional Project Details

Operating Systems

Linux, Windows

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Java, S/R

Related Categories

Java Bio-Informatics Software, S/R Bio-Informatics Software

Registered

2014-12-15

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