Browse free open source Protocols and projects for Linux below. Use the toggles on the left to filter open source Protocols by OS, license, language, programming language, and project status.

  • Build Agents and Models on One Platform Icon
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  • 1
    Plausible Analytics

    Plausible Analytics

    Simple, open-source, lightweight and privacy-friendly web analytics

    Plausible is lightweight and open-source web analytics. No cookies and fully compliant with GDPR, CCPA and PECR. Made and hosted in the EU, powered by European-owned cloud infrastructure. Frustrated with Google Analytics? So are we and that's why we built Plausible Analytics, a simple, lightweight (< 1 KB), open source, and privacy-friendly alternative that doesn't come from the adtech world. Web analytics went from a simple, fun and useful practice for site owners to a data-grabbing machine for surveillance capitalism. Google Analytics is frustrating to use, difficult to understand, slow to load and privacy-invasive too. Plausible Analytics is built for privacy-conscious site owners. You get valuable and actionable stats to help you improve your efforts while your visitors keep having a nice and enjoyable experience. Plausible is simple analytics. It is easy to understand and it cuts through the noise.
    Downloads: 3 This Week
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  • 2

    Yamwi

    Yamwi = Yet Another Maxima Web Interface.

    Run Maxima programs via the web in batch mode. Maxima is a Computer Algebra System written in Lisp.
    Downloads: 13 This Week
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  • 3
    GeoWebCache

    GeoWebCache

    GWC is a tile server and caching proxy written in Java

    GeoWebCache is a WMS tile cache that lets you serve cached map data to WMS clients, Goole Earth, Google Maps and MS Virtual Earth. The system is pluggable on both ends and does automatic matching to the best available tile. It is very fast and scalable.
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    Downloads: 19 This Week
    Last Update:
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  • 4
    Orthanc

    Orthanc

    Lightweight, RESTful DICOM server for healthcare and medical research

    [2015-06-12] Orthanc has left SourceForge. All the downloads are now available directly from our official Website: http://www.orthanc-server.com/browse.php
    Downloads: 7 This Week
    Last Update:
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  • Build Securely on AWS with Proven Frameworks Icon
    Build Securely on AWS with Proven Frameworks

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  • 5
    CBMPy

    CBMPy

    PySCeS Constraint Based Modelling

    PySCeS CBMPy is a new platform for constraint based modelling and analysis. It has been designed using principles developed in the PySCeS simulation software project: usability, flexibility and accessibility. CBMPy supports the latest standards for encoding CBM models encoding, SBML L3 FBC, COBRA as well as MIRIAM compliant RDF and custom annotations. Its architecture is both extensible and flexible using data structures that are intuitive to the biologist while transparently translating these into the underlying mathematical structures. . CBMPy implements popular analyses such as FBA, FVA, element/charge balancing, network analysis and model editing as well as advanced methods developed for the ecosystem modelling. CBMPy supports user interaction via: - interactive console or as a library for advanced use - GUI, visual representation of the model, analysis methods - a SOAP based webAPI exposes high level functionality via web services
    Downloads: 2 This Week
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  • 6
    Based on HL7 v.2.3.1 Orders & Results Reference Information Model (RIM)s, The project is NOT a CPOE per-se. Instead, the project provides "applications" that allow EHR's to perform Outpatient Orders and Results via HIE, and collect these into their EHRs to feed the EHR "CPOE module / section" (ex. with prescribed drugs, ordered labs and results, ....) The first module in the project was the "ePrescribing application"; certified by RxHub and SureScripts back in 2007. New implementation needs to "re-certify" with SureScripts (which should not be much of a problem) Work on eLabs (using ELINCS, LOINC etc.) is being considered as participants join the project become available. The HL7 RIM allows for eImaging applications, eConsults applications, eReferrals applications, etc. Applications work independently, but through HIE, results come back to the provider to see it in its "CPOE Section or Module" Requires licensing of the MediSpan Drug Database for ePrescrib
    Downloads: 1 This Week
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  • 7
    Integrate the power of the fully AJAX enabled technology of ICEfaces into the framework of the ESRI WebADF. No need to code in Javascript or to handle XML communication to build AJAX functionalities. OnlineDemo: http://www2.pch.etat.lu/pchViewer
    Downloads: 1 This Week
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  • 8
    Smart servers that can provide customized snippets of digital orthophotos using just-in-time geoprocessing and interoperable web-based components. These servers are based on the MITOthoServers who was under the GNU Public License (GPL).
    Downloads: 1 This Week
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  • 9
    Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.
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    Downloads: 1 This Week
    Last Update:
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  • 10
    A traslator from BPEL4WS processes to YAWL workflows that works with translation patterns. It takes a BPEL document in input and creates a YAWL workflow that rapresents it.
    Downloads: 0 This Week
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  • 11
    BioNotate is an open-source web-based tool for the collaborative and distributed annotation of biomedical text with entities and facts of interest.
    Downloads: 0 This Week
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  • 12
    The BioSchemas project develops XML schemas for the exchange of biological data e.g. through SOAP-based web services. It is a collaborative and open project intended to increase the interoperability between bioinformatics applications.
    Downloads: 0 This Week
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  • 13
    Decision support tool that assesses breast cancer risk and identifies risk-reducing interventions. Includes web service implementations of established models -- BRCAPRO, Gail, Claus, BCSC Density -- for calculating breast cancer risk.
    Downloads: 0 This Week
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  • 14
    CUAHSI WaterObjectFlow provide JSON web service for hydrology observation data,sponsored by National Science Foundation of United States,developed by Joe hu, MapWindow software lab,Idaho State University
    Downloads: 0 This Week
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  • 15
    A PHP webapp to upload taxonomic checklists as Excel or CSV files to be served as TDWG TCS XML/RDF. It can handle multiple checklists, has a Tapir light webservice and a taxonomic tree of species names created from taxonomy in a checklist can be browsed.
    Downloads: 0 This Week
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  • 16
    The Citizen Privacy Service is an asynchronous component using artificial intelligence capabilities including DL decidability and first order logic provenance that provide policy decision and policy enforcement points based on the US Privacy Act of 1974.
    Downloads: 0 This Week
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  • 17
    ClinicWeb is a complete Health Information System (EHR - Electronic Health Medical Record); it access MySQL Database over Internet or local network; developed in Java - © 2008 - UNIFESP / Paulo Salomao, Amilton Martha, Carlos J R Campos, Daniel Sigulem
    Downloads: 0 This Week
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  • 18
    A software to store, (PUT) meteorological data from complex free form text format to databases and and GET stored (and already loaded) data from databases using OPeNDAP protocol. Written using Java6, XSD, and C++. It support OPeNDAP clients thanks to
    Downloads: 0 This Week
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  • 19
    DrOntoAPI
    A consumer API that can process the response of an ontology evaluation web service provider.
    Downloads: 0 This Week
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  • 20
    EdgeExpressDB (eeDB) is a federated data abstraction system designed for integrating, interpreting, and visualizing very large biology datasets. It is designed for scaling beyond Petabytes and 10^13 objects. http://fantom.gsc.riken.jp/4/edgeexpress
    Downloads: 0 This Week
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  • 21
    Eirik is a tool for exploring large data sets, by using statistical analyses and multiple linked visualizations for data reduction. It relies on R, QT4 and OpenGL. Developed as part of AstroGrid/VOTech, Eirik uses Ice and xmlrpc for distributed computing.
    Downloads: 0 This Week
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  • 22
    EDAS2 is a web-based environmental quality data management and decision support framework
    Downloads: 0 This Week
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  • 23
    GeoJazzy WMSTileCache is a JEE WMS Tile Cache Web service. It optimizes and decreases the WMS request response between a WMS Server like mapserver and some Web clients like Openlayers or UDIG.
    Downloads: 0 This Week
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  • 24

    Grid Computing MDR

    Grid-enabled version of the MDR software

    The objective of this project is to make available an open-source of a gridified version of the Multifactor Dimensionality Reduction (MDR) software (http://www.epistasis.org/software.html).
    Downloads: 0 This Week
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  • 25

    HadStat

    HadStat is service on cloud,for data analysis using Hadoop MapReduce.

    HadStat is service on the cloud, allow you to analysis the data on the cloud and return the result in nice graph,this service is free, you can redistribute it and/or modify it under the terms of the GNU General Public License. this service using many technologies , like Hadoop mapreduce, HTML, PHP, Web Service applications, linux server, java, eclipse IDE, with many indicators:Simple moving average (SMA),Exponential moving average (EMA),Smoothed simple moving average (SMMA),Linear weighted moving average (LWMA )on DATA from NYSE daily prices.....
    Downloads: 0 This Week
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