Open Source Linux Information Analysis Software

Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.

Grafana OSS is a leading open-source visualization and observability platform that lets you query, visualize, alert on, and explore your data—regardless of where it’s stored. With support for 100+ data source plugins (such as Prometheus, Loki, Elasticsearch, InfluxDB, SQL/NoSQL databases, OTel, and more), you can unify metrics, logs, traces, and other observability signals in one place. Grafana OSS empowers you to build dynamic, reusable dashboards with rich visualizations, template variables, interactive filtering, and cross-panel linking. Its Explore mode enables ad-hoc queries and side-by-side comparisons of time ranges, queries, and data sources. Grafana also includes built-in alerting, allowing you to define threshold-based rules and send notifications to external systems (e.g. Slack, PagerDuty, OpsGenie). Backed by a strong community (https://grafana.com/community/) and open governance, Grafana OSS is free to use, modify, and deploy under the AGPL-3.0 license.

Elasticsearch is a distributed, RESTful search and analytics engine that lets you store, search and analyze with ease at scale. It lets you perform and combine many types of searches; it scales seamlessly, and offers answers incredibly fast with search results you can rank based on a variety of factors. Elasticsearch can be used for a wide variety of use cases, from maps and metrics to site search and workplace search, and with all data types.

JDIFF is a program that outputs the differences between two binary files, either in binary format or in human readable format (detailed or summarized) and then allows to reconstruct the second file from the first one and the diff-file.

This project offers open source implementations for UNESCO/IFIP's Algol 68 (the Revised Report language). The project offers two implementations: Implementation 1 is Algol68G: a recent checkout hybrid compiler/interpreter by Marcel van der Veer, supporting arbitrary arithmetic, partial parametrisation, complex numbers, POSIX threads, GNU plotutils, GNU scientific library, curses, sound, TCP sockets, RegEx and PostgreSQL. Inplementation 2 is algol68toc, a port by Sian Mountbatten of the vintage Algol68RS (UK Defense Research Agency) compiler. The implementation emits C code.

Xplico is a Network Forensic Analysis Tool (NFAT). The goal of Xplico is extract from an internet traffic capture the applications data contained. For example, from a pcap file Xplico extracts each email (POP, IMAP, and SMTP protocols), all HTTP contents, each VoIP call (SIP, MGCP, MEGACO, RTP), IRC, WhatsApp... Xplico is able to classify more than 140 (application) protocols. Xplico cam be used as sniffer-decoder if used in "live mode" or in conjunction with netsniff-ng. Xplico is used also in CapAnalysis: http://www.capanalysis.net

wview is a unix application for weather stations. It archives weather data from the station. Generates full html web sites with graphics. ftp/ssh export capability. MySQL/PostgreSQL archiving. International. Weather alarms. Data feed. RSS feed.

Welcome to OSAF! The OSAF-Toolkit was developed, as a senior design project, by a group of IT students from the University of Cincinnati, wanting to pioneer and pave the way for standardization of Android malware analysis. The OSAF-Toolkit is built from Ubuntu 11.10 and pre-compiled with all of the tools needed to rip apart applications for code review and malware analysis. Our primary goal with the toolkit is to be able to make application analysis as easy as possible. We also wanted to create a community where security professionals, analysts, developers and newcommers can learn, discuss and share methodologies with one another. Follow us on Twitter @OSAF_Community Follow us on Facebook http://www.facebook.com/OpenSourceAndroidForensics

Simple Event Correlator (SEC) is a lightweight event correlator for network management, log file monitoring, security management, fraud detection, and other tasks which involve event correlation.

FTimes is a forensic system baselining, searching, and evidence collection tool. Its primary purpose is to gather and/or develop topographical information and attributes about specified directories and files in a manner conducive to intrusion and forensic analysis.

Unicornscan is an asynchronous TCP and UDP port scanner developed by the late Jack C. Louis.

Dowser is a research tool for the web. It clusters results from search engines, associates words that appear in previous searches, and keeps a local cache of all the results you click on in a searchable database. It helps you keep track of what you find.

Pretty Damn Quick (PDQ) analytically solves queueing network models of computer and manufacturing systems, data networks, etc., written in conventional programming languages. Generic or customized reports of predicted performance measures are output.

MACOW is a formal and scalable mandatory access implementation suitable on open worlds such as the provided on Semantic Web, Autonomic Computing and Coaltions and Federations scenarios. It is able to access control on distributed systems.

The NS-Mapper ad-hoc scenario editor is improved and extended by adding more realistic strategies, such as random based node placement, movement and traffic to the ad-hoc simulation of the Network Simulator 2 (NS-2).

RSMeter is a package for interfacing to the RadioShack/Metex 22-168A series of serial-connected multimeters. Currently, it includes an ncurses interface and a script to graph readings. Support for other meters is planned in the future, with an API.

easy fusion is a java-based framework that intends to automatically deploy and control information fusion systems (IFS) on distributed and dynamic resources.

A.I. security app. Development ceased.

Using this plugin-based framework, you can instantly start working on the *brain* of your bot (irc bot, chatterbot, robot, ...). With support for db, irc, logging and programming-language independent plugins, users can easily enhance the functionality.

One persons quest to keep outdated hardware out of our landfills by putting them back in use with a modern lightweight Operating System. Linux LucidPup 5.2.8 and SlackoPup 5.3.3 have been used as the base OS for this project for two reasons, compact and portable. Both versions come in two flavors: "MeatyBones" basic barebones get the job done with Wine and Boinc pre-installed "BaconBits" which is the Flagship of this project and will come with "BoincTasks", "SetiMapView" and "SETIsprint" pre-installed atop of Wine and Boinc. The two ISO's have been remastered from the basic downloadable versions available anywhere on the internet. Both ISO's have been scanned twice with Avast and Nortons antivirus and both have been tested in good to awesome condition. But don't just take my word for it that it works, go download it and test it out on your own hardware or Virtual machine. You will be pleasantly surprised. Thank you for your interest in this project. Mr. Gordon

Ardamon is an arduino and PHP based solution to replace your thermostat so you gain a open-source solution that is manageable online. It also offers statistics and can help regulate many sensors around your house

Semi-Automated Debugger for TinyOS Network Applications

A high-performance implementation of bloom filters, a lightweight duplicate detection algorithm.

A bash script that allows Seti @ Home users to queue up and process multiple work units. This means you don't have to connect to the seti servers after every work unit, and only when you want to.