Open Source Java Data Management Systems

Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. Files can be transferred directly from several databases, including RCSB, EDS, NCI, PubChem, and MaterialsProject. Multiple files can be loaded and compared. A rich scripting language and a well-developed web API allow easy customization of the user interface. Features include interactive animation and linear morphing. Jmol interfaces well with JSpecView for spectroscopy, JSME for 2D->3D conversion, POV-Ray for images, and CAD programs for 3D printing (VRML export).

Pentaho couples data integration with business analytics in a modern platform to easily access, visualize and explore data that impacts business results. Use it as a full suite or as individual components that are accessible on-premise, in the cloud, or on-the-go (mobile). Pentaho enables IT and developers to access and integrate data from any source and deliver it to your applications all from within an intuitive and easy to use graphical tool. The Pentaho Enterprise Edition Free Trial can be obtained from https://pentaho.com/download/

ReportServer is a modern and versatile open source business intelligence (BI) platform with powerful reporting features. With ReportServer you are not limited to one provider's solutions. ReportServer integrates Jasper, Birt, Mondrian and Excel-based reporting: choose what best suits your needs! The source code is also available in GitHub: https://github.com/infofabrik/reportserver ReportServer scripting samples: https://github.com/infofabrik/reportserver-samples

Analyze and visualize tours in many variations, which are recorded with a GPS device, bike-, exercise- or ergometer-computer. Some highlights: Tools are available to adjust recorded data, GPS tours can be visualized in customizable maps, ...

GpsPrune is a java application to view and manage coordinate data, eg from GPS units. With it you can load a variety of text and Xml formats, view the data (in 2d and 3d), edit and convert the data, correlate photos and audio, create charts and more.

MailArchiva is a powerful, full featured email archiving (email archiver) and compliance solution for mail systems such as Microsoft Exchange. It stores all incoming, outgoing and internal emails for long term storage. A web based user interface is avail

Active Intelligence Server 2 (AIS) is a data visualization tool and fully featured reporting server which enable users from open source community to host any reports created using BIRT, Jasper and Pentaho community edition allowing organization to leverage open source technologies and enable them to use AIS as a reporting server to deploy their existing and new reports seamlessly onto AIS for secure sharing the information in different file formats and schedule to make system automation and much more. AIS comes with self-service BI capabilities enabling end users to make the data-driven decision at the right time, all with minimal IT dependency. Tightly integrated user and role management ensure correct information distribution that prevents unauthorized access to information, collaboration is ever so easy with AIS that people with no BI knowledge can start real-time collaboration in minutes. AIS 2 is also available from the website http://activeintelligence.co.uk/download

BIRD stands for Business Intelligence Research and Development and it is part of the CoIntell Corporation (www.cointell.com). The goal of the BIRD community is to develop smart BI solutions Fast!

Remotely Inventory and Poll UNIX servers in seconds. (without installing extra software on your servers, just by SSH communication plain old UNIX commands).https://sites.google.com/site/ronuitzaandam/ Your entire datacenter can be automatically inventoried by supplying hostname, username & password for each server, either “one by one” or via an automated CSV host-list import file. This software goes great with other UNIX software like WinSCP and Putty etc !!!

This projects concentrates software for setting up a chemical dictionary website.

A VUB (www.vub.ac.be) -student project to simulate an ip/tcp and digital network. The project has ended for this year, files will be released in febr 2004. In october, a new group of students will continue to work on this project.

The JChemPaint Applet and Swing Application are Java programs for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development Kit (cdk.sf.net). Downloads, tracker, and source code repository can be found on https://jchempaint.github.io

MERRYts is the Most Efficient Reader for Representing Your Terminology System. One GUI for all (medical) Terminology Systems

Niamtool v2 is a graphical drawingtool for creating NIAM-diagrams (Niam is Nijssen Information Analyses Method) As far as we know is the only niam-drawingtool in existance (excluding Niamtool v1). It\'s written in java 1.4.

Tockit tries to build a framework for Conceptual Knowledge Processing (CKP) and Formal Concept Analysis (FCA) in Java, using a component-based approach, XML formats and a three-tier architecture.

multi-agent approach to traffic control: -3D visualization -XML-input for traffic networks -simulation progress control -basic performance statistics -delegate MAS -BDI based vehicles -pluggable behavior modules -pluggable coordination modules