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Pull requests: torognes/vsearch

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Pull requests list

Add Edgar RC (2016) UNOISE2 to references
#505 by peterjc was merged Jan 26, 2023 Loading…
1 👍 2
Update cluster_unoise in man
#290 by davidealbanese was merged Feb 14, 2018 Loading…
Fix example in man page
#125 by wwood was merged Oct 2, 2015 Loading…
1
add --relabel option to --shuffle #121
#131 by colinbrislawn was closed Oct 9, 2015 Loading…
1
Add test for --search_exact
#133 by colinbrislawn was merged Oct 22, 2015 Loading…
2
disable default CXXFLAGS
#137 by xflouris was merged Nov 2, 2015 Loading…
1
quote fasta record names in --uc output
#141 by ryneches was closed Jan 12, 2016 Loading…
Add idoffset argument for clustering of non-overlapped paired-end reads
#167 by astanabe was closed Apr 14, 2016 Loading…
2
Windows Modifications For Compilation with Visual Studio 2015
#172 by mothur-westcott was closed Feb 8, 2017 Loading…
4
Add fastq_maxdiffpct option (% difference for merging pairs)
#231 by joe-wan was closed Apr 24, 2018 Loading…
4
fix link to manpage in README.md to close #246
#247 by colinbrislawn was merged May 29, 2017 Loading…
1
UNOISE
#283 by davidealbanese was merged Feb 7, 2018 Loading…
20
UCHIME2 and 3
#287 by davidealbanese was merged Feb 13, 2018 Loading…
1
2
MAINT: renaming string.h to xstring.h
#92 by wasade was merged Jun 3, 2015 Loading…
Cleaning up whitespaces
#300 by mys721tx was closed Apr 12, 2018 Loading…
1
General formatting
#310 by mys721tx was closed May 22, 2018 Loading…
2
Updating CFLAGS
#327 by mys721tx was merged Aug 14, 2018 Loading…
2
Collecting CFLAGS to a central location
#330 by mys721tx was closed Oct 29, 2018 Loading…
3
Fix sintax.cc: domain should be before kingdom
#349 by davidealbanese was merged Dec 10, 2018 Loading…
1
Add link to the BioConda package
#351 by peterjc was merged Dec 20, 2018 Loading…
1
add Action to the dev branch
#581 by frederic-mahe was merged Nov 18, 2024 Loading…
Force weak_id to be a reasonable value when cluster_unoise (0.9)
#362 by davidealbanese was merged Feb 28, 2019 Loading…
1
FIX: silence fastq_stats() if --quiet
#378 by angrybee was merged Jul 1, 2019 Loading…
1
fix reverse complement sequence hash when header used: if header hash…
#418 by wulj2 was merged Aug 4, 2020 Loading…
1
MAINT: Add const modifier.
#289 by jvkersch was closed Feb 13, 2018 Loading…
2
ProTip! Updated in the last three days: updated:>2024-12-08.