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Pull requests: torognes/vsearch

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Pull requests list

add Action to the dev branch
#581 by frederic-mahe was merged Nov 18, 2024 Loading… updated Nov 18, 2024
automatically generate markdown files and deploy Pages
#579 by frederic-mahe was merged Nov 18, 2024 Loading… updated Nov 18, 2024
1
Enable building on any 64-bit little-endian architecture
#566 by mr-c was merged Sep 25, 2024 Loading… updated Oct 16, 2024
6
vsearch.1: typo choosen -> chosen.
#561 by emollier was merged May 8, 2024 Loading… updated May 8, 2024
Fix: small typo in the man pages
#420 by NielsonJ was merged Sep 10, 2020 Loading… updated Dec 9, 2023
1
src/derepsmallmem.cc: fix minor typo.
#540 by emollier was merged Nov 15, 2023 Loading… updated Nov 15, 2023
1
fix two GCC 10.2 format warnings enhancement
#471 by frederic-mahe was closed Jan 10, 2022 Loading… updated Jun 15, 2023
2
cite Edgar and Flyvbjerg (2015)
#468 by frederic-mahe was merged Jan 10, 2022 Loading… updated Jun 15, 2023
Include new labels in uc output for dereplication if --relabel option provided
#515 by chlige was closed Mar 13, 2023 Loading… updated Mar 13, 2023
3
Add Edgar RC (2016) UNOISE2 to references
#505 by peterjc was merged Jan 26, 2023 Loading… updated Jan 26, 2023
1
Check for SSSE3 should be build time, not run time.
#497 by heshpdx was closed Sep 26, 2022 Loading… updated Sep 26, 2022
3
compute runtime value only once
#450 by frederic-mahe was merged Jun 30, 2021 Loading… updated Jul 6, 2021
1
set pointer to null
#449 by frederic-mahe was merged Jun 30, 2021 Loading… updated Jun 30, 2021
1
fix reverse complement sequence hash when header used: if header hash…
#418 by wulj2 was merged Aug 4, 2020 Loading… updated Aug 4, 2020
1
FIX: silence fastq_stats() if --quiet
#378 by angrybee was merged Jul 1, 2019 Loading… updated Jul 1, 2019
1
General formatting
#310 by mys721tx was closed May 22, 2018 Loading… updated May 25, 2019
2
Collecting CFLAGS to a central location
#330 by mys721tx was closed Oct 29, 2018 Loading… updated May 25, 2019
3
Pumping MACOSX_DEPLOYMENT_TARGET
#353 by mys721tx was closed Mar 18, 2019 Loading… updated Mar 18, 2019
3
UNOISE
#283 by davidealbanese was merged Feb 7, 2018 Loading… updated Mar 5, 2019
20
Force weak_id to be a reasonable value when cluster_unoise (0.9)
#362 by davidealbanese was merged Feb 28, 2019 Loading… updated Feb 28, 2019
1
Cleaning up whitespaces
#300 by mys721tx was closed Apr 12, 2018 Loading… updated Feb 5, 2019
1
Add link to the BioConda package
#351 by peterjc was merged Dec 20, 2018 Loading… updated Dec 20, 2018
1
Fix sintax.cc: domain should be before kingdom
#349 by davidealbanese was merged Dec 10, 2018 Loading… updated Dec 10, 2018
1
Updating CFLAGS
#327 by mys721tx was merged Aug 14, 2018 Loading… updated Oct 23, 2018
2
Add fastq_maxdiffpct option (% difference for merging pairs)
#231 by joe-wan was closed Apr 24, 2018 Loading… updated Apr 24, 2018
4
ProTip! Adding no:label will show everything without a label.