Releases: stephenslab/susieR
Releases · stephenslab/susieR
susieR version 0.14.2 released on CRAN
v0.14.2 susieR version 0.14.2 released on CRAN.
susieR version 0.12.35 released on CRAN
Removes the L0Learn dependency since it was no longer available on CRAN.
susieR version 0.12.27 released on CRAN
v0.12.27 susieR version 0.12.27 released on CRAN.
susieR 0.12.16 released on CRAN (June 27, 2022)
v0.12.16 susieR version 0.12.16.
susieR 0.11.92 released on CRAN (November 12, 2021)
v0.11.92 susieR version 0.11.92
susieR 0.11.84 released on CRAN (November 10, 2021)
v0.11.84 susieR version 0.11.84
susieR release published on CRAN (June 2, 2021)
v0.11.33 susieR version 0.11.33
Version 0.9.0
This version has some interface changes and minor improvements:
susie_bhatandsusie_ssare now merged tosusie_suff_stat- Additional input check and preprocessing options are implemented to
susie_rss - Add a method
simpletoestimate_prior_methodthat simply compares specified prior variance with zero and set it to zero if the latter has higher loglikelihood.
Version 0.8.0
This version improves the sufficient statistics interface susie_ss and susie_bhat, and introduces a new model susie_rss for summary statistics version of SuSiE using RSS model. Specifically:
var_yis now replaced byytyinsusie_sssusie_zis now replaced bysusie_rssusing the new RSS model- Various checks for input covariance / correlation matrix of
X, and for input summary statistics, to ensure they are in the space spanned by non-zero eigenvectors of covariance / correlation matrix ofX - Add interface to access posterior quantities #84
- Unify
Xdata object for dense and sparse matrices
(Credits goes to @zouyuxin for 1-4 and @KaiqianZhang for 5)
Version 0.7.1
This release is a patch to 0.7.0 that performs filtering by default with susie_get_CS function for effects with estimated V=0.