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1. samtools samtools Public

   Tools (written in C using htslib) for manipulating next-generation sequencing data

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2. htslib htslib Public

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3. bcftools bcftools Public

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4. hts-specs hts-specs Public

   Specifications of SAM/BAM and related high-throughput sequencing file formats

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5. htsjdk htsjdk Public

   A Java API for high-throughput sequencing data (HTS) formats.

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6. tabix tabix Public archive

   Note: tabix and bgzip binaries are now part of the HTSlib project.

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