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    245 repositories

    • ood-announcements

      Public
      Repo to add announcements on the OOD dashboard
      0•0•0•0•Updated Jan 1, 2026Jan 1, 2026

    • coldfront

      Public
      HPC Resource Allocation System
      Python
      •
      GNU General Public License v3.0
      •103•13•0•8•Updated Dec 23, 2025Dec 23, 2025

    • slurm-puppet

      Public
      puppet module to configure slurm
      Python
      •0•0•0•0•Updated Dec 22, 2025Dec 22, 2025

    • slurm-spec

      Public
      slurm.spec for building slurm rpms at FASRC
      MIT License
      •0•0•0•0•Updated Dec 19, 2025Dec 19, 2025

    • seff-array

      Public
      Python
      •5•0•0•0•Updated Dec 16, 2025Dec 16, 2025

    • ood-jupyter

      Public
      Open OnDemand Jupyter app
      HTML
      •
      MIT License
      •0•0•0•0•Updated Dec 16, 2025Dec 16, 2025

    • seff-account

      Public
      Python
      •5•2•0•0•Updated Dec 15, 2025Dec 15, 2025

    • modules

      Public
      Repository to host tool-specific module files for the Nextflow DSL2 community!
      Nextflow
      •
      MIT License
      •951•0•0•0•Updated Dec 13, 2025Dec 13, 2025

    • spatialvi

      Public
      Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
      Nextflow
      •
      MIT License
      •28•0•0•0•Updated Dec 12, 2025Dec 12, 2025

    • puppet-module-xdmod

      Public
      Ruby
      •
      Other
      •7•0•0•0•Updated Dec 11, 2025Dec 11, 2025

    • puppet-slurm_stats

      Public
      Prints some user Slurm stats on login.
      Python
      •
      MIT License
      •1•1•0•0•Updated Dec 9, 2025Dec 9, 2025

    • jupyter_environment_kernels

      Public
      An Jupyter plugin to enable the automatic detection of conda and virtualenv environments as kernels.
      Python
      •
      BSD 2-Clause "Simplified" License
      •17•0•0•0•Updated Dec 9, 2025Dec 9, 2025

    • User_Codes

      Public
      Jupyter Notebook
      •19•88•7•4•Updated Dec 5, 2025Dec 5, 2025

    • prometheus-slurm-exporter

      Public
      Prometheus Exporter for Slurm
      Python
      •
      MIT License
      •3•3•0•0•Updated Dec 4, 2025Dec 4, 2025

    • slurm-scripts

      Public
      Various useful slurm scripts
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 3, 2025Dec 3, 2025

    • scrnaseq

      Public
      Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection
      Nextflow
      •
      MIT License
      •206•0•0•0•Updated Dec 3, 2025Dec 3, 2025

    • reframe-fasrc

      Public
      FASRC specific configuration for Reframe
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Dec 1, 2025Dec 1, 2025

    • puppet-module-nhc

      Public
      Ruby
      •
      Other
      •5•0•0•0•Updated Dec 1, 2025Dec 1, 2025

    • bioconda-recipes

      Public
      Conda recipes for the bioconda channel.
      Shell
      •
      MIT License
      •3.7k•0•0•0•Updated Nov 25, 2025Nov 25, 2025

    • stress-test

      Public
      Codes to stress test nodes - use caution!!
      Shell
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Nov 21, 2025Nov 21, 2025

    • helmod

      Public
      Harvard Extensions for Lmod deployment
      lmod
      Ruby
      •
      Other
      •6•28•4•0•Updated Nov 18, 2025Nov 18, 2025

    • ood-containerized-rstudio-server

      Public
      RStudio Server app for Open OnDemand
      HTML
      •
      MIT License
      •0•0•0•0•Updated Nov 14, 2025Nov 14, 2025

    • ood-cryosparc

      Public
      Open OnDemand CryoSPARC app (containerized, single-node, accessed via OOD Remote Desktop or local web browser + SSH port forwarding)
      HTML
      •
      MIT License
      •2•0•0•0•Updated Nov 7, 2025Nov 7, 2025

    • job_defense_shield

      Public
      Identify and reduce instances of underutilization by the users of high-performance computing systems
      Python
      •
      GNU General Public License v2.0
      •4•0•0•0•Updated Nov 5, 2025Nov 5, 2025

    • podman

      Public
      Puppet module for podman
      Ruby
      •
      Apache License 2.0
      •41•0•0•0•Updated Oct 28, 2025Oct 28, 2025

    • ood-containerized-remote-desktop

      Public
      OnDemand app to deploy Containerized Remote Desktop GUI as interactive instance on compute nodes on the FASRC clusters
      HTML
      •
      MIT License
      •0•0•0•0•Updated Oct 7, 2025Oct 7, 2025

    • ood-remote-desktop

      Public
      OnDemand app to deploy Remote Desktop GUI as interactive instance on compute nodes on the FASRC clusters
      HTML
      •
      MIT License
      •0•0•0•0•Updated Oct 7, 2025Oct 7, 2025

    • ood-knime

      Public
      OnDemand App to deploy Knime GUI as interactive instance on compute nodes on the FASRC clusters
      HTML
      •
      MIT License
      •0•0•0•0•Updated Oct 7, 2025Oct 7, 2025

    • ood-matlab

      Public
      OnDemand App to deploy Matlab GUI as interactive instance on compute nodes on the FASRC clusters
      Shell
      •
      MIT License
      •0•0•0•0•Updated Oct 7, 2025Oct 7, 2025

    • ood-containerized-heavyai

      Public
      HeavyAI app for Open OnDemand
      HTML
      •0•0•0•0•Updated Oct 6, 2025Oct 6, 2025