Fork to propose a patch for gurobi license management

Copy of the phyloregnum repo

Mkdocs Markdown includer plugin

a python package to measure the 3/4 PCFs of discrete periodic data.

From FASTQ file to antibiotic resistance prediction using RandomForest - the GenTB pipeline wrapped in snakemake

Personal nvim configuration

Jupyterhub MOdular Slurm Spawner

Conda recipes for the bioconda channel.

Weighted version of ASTRAL

An extensively featured Python parser for GFF format reading and writing

Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission

A QIIME2 plugin for running SCNIC

Contains a set of Galaxy Tools mostly written by the Galaxy Team.

software for UCE (and general) phylogenomics

Github mirror of MediaWiki extension Auth_remoteuser - our actual code is hosted with Gerrit (please see https://www.mediawiki.org/wiki/Developer_access for contributing)

CN-Learn

University of Florida High Performance Computing Implementation of Sarek's Pipeline to detect germline or somatic variants from normal or tumour/normal whole-genome, whole exome, or targeted sequen…

Collection of galaxy tools developed by the artbio-platform at the IBPS (Institut de Biologie Paris-Seine)

Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/

Data intensive biology for everyone.

Error correction for Illumina RNA-seq reads

Singularity: Application containers for Linux

Complete suite to analyse DNA contaminants of virus/vector preparation from NGS data

Collection of python 2.7 Utilities and Wrapper for DNA / NGS data manipulation

Pure Python RabbitMQ/AMQP 0-9-1 client library

Port of CTSIT nipype workflow for bedpostx to SLURM

Slurm HPC workload manager web JS dashboard and JSON REST API