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An automated document analyzer for Paperless-ngx using OpenAI API, Ollama, Deepseek-r1, Azure and all OpenAI API compatible Services to automatically analyze and tag your documents.

JavaScript 4,893 228 Updated Jan 1, 2026

Explanation to key concepts in ML

8,252 673 Updated Jun 30, 2025

Meditron is a suite of open-source medical Large Language Models (LLMs).

Python 2,128 205 Updated Apr 10, 2024

RNA-seq prediction with deep convolutional neural networks.

Python 218 30 Updated Aug 28, 2025

Use LLMs and LLM Vision (OCR) to handle paperless-ngx - Document Digitalization powered by AI

Go 1,707 91 Updated Jan 5, 2026

A collection of modern/faster/saner alternatives to common unix commands.

32,688 819 Updated Sep 10, 2024

Chai-1, SOTA model for biomolecular structure prediction

Python 1,849 256 Updated Dec 3, 2025
Python 4,481 476 Updated Jul 25, 2024

Causal Inference for the Brave and True. A light-hearted yet rigorous approach to learning about impact estimation and causality.

Jupyter Notebook 3,193 588 Updated Sep 18, 2025

Statistical Rethinking course winter 2022

R 4,102 438 Updated Mar 15, 2022

This repository contains data on Coronavirus Disease 2019 (COVID-19) in New York City (NYC), from the NYC Department of Health and Mental Hygiene.

954 641 Updated Oct 17, 2025

PRML algorithms implemented in Python

Jupyter Notebook 11,707 3,243 Updated Apr 5, 2025

Oh my tmux! My self-contained, pretty & versatile tmux configuration made with πŸ’›πŸ©·πŸ’™πŸ–€β€οΈπŸ€

Shell 23,989 3,532 Updated Jan 5, 2026

Python development config

Vim Script 747 86 Updated Jul 9, 2020

Highlight points and lines in ggplot2

R 529 24 Updated Jun 14, 2025

simple tools for data cleaning in R

R 1,441 132 Updated Dec 23, 2024

collection of notebooks with different cytoscape workflows

HTML 50 38 Updated Mar 22, 2023

Template for writing a PhD thesis in Markdown

HTML 1,255 556 Updated May 23, 2023

Directory of tutorials and open-source code repositories for working with Keras, the Python deep learning library

3,261 880 Updated Feb 12, 2024

A list of deep learning implementations in biology

2,112 491 Updated Jan 2, 2026

A technical report on convolution arithmetic in the context of deep learning

TeX 14,585 2,319 Updated Jun 8, 2023

Lightweight and Fast; RNA-seq quantification at the event-level

Julia 116 22 Updated May 9, 2025

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

R 816 162 Updated Aug 4, 2024

120+ interactive Python coding interview challenges (algorithms and data structures). Includes Anki flashcards.

Python 31,057 4,618 Updated May 8, 2024

TensorFlow Tutorial and Examples for Beginners (support TF v1 & v2)

Jupyter Notebook 43,770 14,821 Updated Jul 26, 2024

Bioconductor package "polyester", devel version. RNA-seq read simulator.

R 96 53 Updated Sep 14, 2021

Advanced R: a book

TeX 2,439 1,710 Updated Mar 13, 2025

Algorithms implemented in Python

Python 281 120 Updated Feb 2, 2023

a cythonized, extended version of the interval search tree in bx

Python 30 8 Updated Jun 4, 2019

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Jupyter Notebook 28,391 7,955 Updated Jun 25, 2024
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