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Python 4 3 Updated Dec 4, 2025

Tutorials for the ENMTools R package

HTML 8 3 Updated Aug 25, 2020

biodiversity genomics course by Nicol Rueda, Karin Näsvall, Fernando Seixas and Joana Meier from the Wellcome Sanger Institute

R 67 4 Updated Feb 21, 2026

AmphiBIO, a global database for amphibian ecological traits

PHP 2 Updated Oct 16, 2023
Shell 1 Updated Nov 28, 2018

Materials for the INF 515: Comparative Genomics course at NAU taught by Prof. Marc Tollis

Python 13 Updated Apr 3, 2025

Package to create your own labels, certificates, and much more! :)

R 57 3 Updated Dec 19, 2025

Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees

Python 12 2 Updated Sep 6, 2023
Python 11 Updated Dec 12, 2024

A Julia package for estimating phylogenetic networks from genomic data

Julia 20 Updated Jun 3, 2024

Workshop introducing the supersmartR packages and pipeline

R 3 2 Updated Nov 4, 2019

R Markdown Format for reveal.js Presentations

JavaScript 330 85 Updated Mar 28, 2025
Jupyter Notebook 13 3 Updated Mar 13, 2024

BEAST 2 package for species delimitation

Java 8 Updated Nov 26, 2023

Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates a consensus tree. It plots the maximum likelihood tree with…

R 43 1 Updated Mar 7, 2024

Info and materials for the RevBayes workshop held at NIMBioS

4 2 Updated Aug 11, 2017

Reduced Representation sequencing Organellar read Genotyper

Shell 7 1 Updated Oct 13, 2025

Estimating Effective Migration Surfaces

HTML 110 28 Updated Oct 28, 2023
C 12 7 Updated Mar 11, 2025
Jupyter Notebook 8 1 Updated Oct 28, 2020

method for modeling continuous and discrete population genetic structure

C++ 38 15 Updated Jan 8, 2024

SnappNet is a new Bayesian method dedicated to phylogenetic network inference. This project handles Beauti from BEAST and you do not have to handle xml files.

Java 4 Updated Mar 30, 2024
8 3 Updated Sep 18, 2021

Tutorials on phylogenomic analyses for the ForBio Phylogenomics course

Ruby 38 17 Updated Mar 4, 2024

Machuruku

R 32 1 Updated Jan 20, 2025

An R Package to build and simulate coalescent models

HTML 20 2 Updated Feb 19, 2026
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