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github files - linked to CONTRIBUTING from readme

Merge pull request #13 from epi-sam/dev/r_cmd_check

Big merge - dev into main, all tests and R CMD check passing on windows

Merge pull request #12 from epi-sam/feature/abstract_functions

typos

fix - vignettes to build with package install; updated report name in…

… technical vignette

create folder update - always write a log, even if folder already exists

Merge pull request #9 from epi-sam/feature/schema_ordering

logs and reports sort according to log_schema

bugfix - deletions now write to central log