General Characters and Classification of Fungi
General Characters and Classification of Fungi
Classification of Fungi
CONTENT
Introduction of fungi
General characteristics of fungi
Occurance
Thallus organisation
Different forms of mycellium
Cell structure
Nutrition
Heterothallism and Homothallism
Reproduction
Classification of fungi
Classification based on taxonomy hierarchy
Classification based on spore Production
Classification of medically important fungi
Classification based on route of acquisition
Classification based on virulence
Key points of the lecture
Terminology
Assessment Questions
Bibliography
WHAT IS FUNGI ????
Fungi is the plural of word fungus which is derived from the
latin word fungour.
OCCURRENCE:
Fungi are cosmopolitan and occur in air, water soil and on
plants and animals.
THALLUS ORGANIZATION:
Except some unicellular forms (e.g. yeasts, Synchytrium),
the fungal body is a thallus called mycelium.
Filamentous thallus: In most true fungi, the thallus is filamentous composed of Hyphae.
Loosely aggregated hyphae are collectively forms a network known as mycelium. Each hypha may
vary in shapes and sizes. Branching of hyphae is dichotomous. On the basis of presence or absence
of septa the hyphae of mycelical fungi are of two types:
Septate Hyphae: Hyphae are septate and hyphal segments may contain one, two or more nuclei.
E.g., Ascomycotina, Basidiomycotina, and Deuteromycotina. There are two types of septa:
• Primary septa: Primary septa are formed in association with mitotic or meiotic nuclear division,
and they separate the daughter nuclei. These types of septa are found in Ascomycotina,
Basidiomycotina and their asexual states.
• Adventitious septa: Adventitious septa are formed in the absence of mitosis or meiosis and
occur especially in association with change in the local concentration of cytoplasm. These are
found in lower groups of fungi as mastigomycotina and zygomycotina.
DIFFERENT FORMS OF MYCELLIUM
Different forms of mycelium refer to as the various shapes
and the functions of mycelium which modified according
to the circumstances. These includes the following forms:
Lichens are symbiotic associations between fungi and algae. The fungal partner is a member of
ascomycetes or basidiomycetes that provides water and nutrients, while the algal partner is a
green alga or cyanobacteria that prepares food by photosynthesis.
e. Mycorrhizas: or mycorrhizae are the mutualistic symbiotic associations between soil fungi and
the roots of most plant species. According to the carbohydrate theory (Bjorkman, 1949), the
plants that grow in soils deficient in P and N, and high intensity light develop mycorrhizas.
The two most common types of mycorrhizas are the ectomycorrhizas (ECM) and the
endomycorrhizas (also known as arbuscular mycorrhiza). The two groups are differentiated by
the fact that the hyphae of ectomycorrhizal fungi do not penetrate the cell wall of the plant’s
root cells, while the hyphae of arbuscular mycorrhizal fungi penetrate the cell wall.
A B C D
(A) Lichen with (B) internal structure Plant showing (C) with and (D) without mycorrhizae
HETEROTHALLISM AND HOMOTHALLISM
REPRODUCTION
e. Somatogamy: This takes place in fungi where formation of gametes is absent. In such fungi,
anastomoses takes place between hyphae and their somatic cells fuse to produce dikaryotic
cells, e.g, Agaricus, Peniophora etc.
The division of mycota, or fungi and moulds, includes the true slime moulds (Myxomycetes), the
lower fungi (Phycomycetes), and the higher fungi (Eumycetes).
Alexopolous and Mims proposed fungal classification in 1979. They place the fungi including the
slime molds in the kingdom mycetae of the super kingdom Eukaryota which, in addition,
includes four other kingdoms. They divide the kingdom mycetae into three divisions namely:
Gymnomycota
Mastigomycota
Amastigomycota
The division is subdivided into subdivision, classes, sub-classes, and orders.
Division I: Gymnomycota: It includes phagotrophic organism devoid of cell walls. This
division comprises two subdivisions; Acrasiogymnomycotina and Plasmodiogynomycotina.
1. Subdivision : Acrasiogymnomycotina: It includes a single class Acrasiomycetes.
Class 1. Acrasiomycetes : Lacks flagellated cells except for one species. The class comprises:
Sub class 1. Acrasiomycetidae
Sub class 2. Dictyosteliomycetidae
2. Subdivision: Plasmodiogymnomycotina: It is divided into two classes:
Class 1. Protosteliomycetes
Class 2. Mycomycetes: It includes the true slime mold and comprises three sub class namely:
Sub class 1. Ceratiomyxomycomycetidae, 1 Order : Ceratiomyxales
Sub class 2. Mycogasteomycetidae, 4 Orders: Liceales, Echinosteleales, Trichlales, Physarales
Sub class 3. Stemonitomycetidae, 1 Order: Stemonitales
Division II: Mastigomycota: Includes fungi with absorptive nutrition, unicellular or
filamentous, mycelium coenocytic. It comprises two sub divisions:
1. Sub division: Haplomastigomycotina: Includes fungi with uni-or, bi-flagellate zoospores.
Class 1. Chytridiomycetes– Fungi producing zoospores furnished with a single whiplash
flagellum inserted at the posterior end.
Class 2. Hyphochytridiomycetes- Motile cells with a single tinsel flagellum inserted at the
anterior end.
Class 3. Plasmodiophoromycetes- Parasitic fungi producing biflagellate motile cells with
both the flagella of whiplash type inserted at the anterior end.
2. Sub division: Diplomastigomycotima: Sexual reproduction ooagamous,
zoospores biflagellate.
Class 1. Oomycetes, 4 Orders: Lagenidiales, Saprolegnailes, Leptomitales, Peronosporales
Division III: Amastigomycota: Fungi with absorptive nutrition, motile cells lacking,
mycelium aseptate or septate. This includes four sub divisions:
1. Sub division: Zygomycotina
Class 1. Zygomycetes – it includes six orders.,
Class 2. Trichomycetes – it comprises five orders.
2. Sub division: Ascomycotina: Fungi usually with a septate mycelium producing haploid
ascospores in sac like cells called asci.
Class 1. Ascomycetes: Divided into five sub classes:
Sub class 1. Hemiascomycetidae- comprising three orders.
Sub class 2. Plectomycetidae- Five orders
Sub class 3. Hymenoascomycetidae – Ten
orders Sub class 4. Laboulbeniomycetidae – Two
orders Sub class 5. Lowloascomycetidae – five
orders
3. Sub division 3: Basidiomycotina: Septate mycelium, produces basidiospores, exogenously on
various types of basidia.
Class 1. Basidiomycetes: it is split into 3 sub clases:
Sub class 1. Holobasidiomycetidae
Sub class 2. Phragmobasidiomycetidae
Sub class 3. Teliomycetidae
4. Sub division: Deuteromycotina: It includes imperfect fungi in which sexual
stage is unknown. It comprises a single class.
Class 1. Deuteromycetes
Sub class 1. Blastomycetidae
Sub class 2. Coelomycetidae
Sub class 3.Hyphomycetidae
Martin (1965) proposed a classification according to the spore formation in fungi. The outline of
classification is given;
Division mycota: These include non green, nucleated thallophytes which are saprophytes or parasite in nutrition.
Subdivision Myxomycotine: Thallus is achlorophyllus, multinucleated mass of protoplasm called plasmodium, e.g., slime molds.
Subdivision Eumycotina: All the fungi except the slime molds are included in this subdivision.
Lower fungi: They have simple thallus which are unicellular and others filamentous (mycelium), usually septa is not present.
Class Chytridiomycetes: Motile cells have a single flagellum of whiplash type inserted at the posterior end.
Class Hyphochytridiomycetes: Motile cell spossesses a single flagellum of tinsel type inserted at the anterior end.
Class Plasmodiophoromycetes: Motile cells are biflagellated (whiplash type), but one is longer than the other one.
Class Oomyceters: Motile cells are biflagellated, nearly equal length, one of these points forwards and the other trails behind.
Class Zygomycetes: Motile cells are absent. Asexual reproduction take place by sporangiospores.
Class Trichomycetes: Motile cells are lacking. Asexual reproduction take place by conidia.
Higher fungi: The somatic phase consists mostly of a mycelium which is usually septate.
Class Ascomycetes: The characteristic spores called ascospores are produced endogenous within sac like structure called asci.
Class Basidiomycetes: Characteristic spores called basidospores are produced exogenous on club shaped structure called basidia.
Class Deuteromycetes: Sexual stage is unknown. The somatic phase consist a septate mycelium which multiply by conidia.
A more natural system of classification of fungi was proposed by Ainsworth (1973) which has
been accepted by many mycologist today like Webster (1980), Bilgrami (1985 and Dube (1987).
o Classification based on spore production:
On the basis of the organisation of the vegetative thallus, the morphology of reproductive
structures, the way of spores production and particular life cycle involved the kingdom mycota is
classified into following divisions.
Phycomycetes
• It includes the simplest type of fungi. It is also called as Algae-Fungi because most of the
characteristics of them are similar to algae like Vaucheria.
• They have simple thallus which is unicellular or coenocytic or aseptate filaments.
• They reproduce asexually by the formation of zoospores or non-motile spores.
• Sexual reproduction is isogamous or heterogamous which takes place by gametangial contact.
• The diploid phase is represented by zygote.
• Phycomycetes has been classified into subclasses: oomycetes and zygomycetes.
Oomycetes
• The group is named zygomycetes because a diploid resting spore called the zygospore is formed
during the life cycle.
• They are mostly saprophytic, some others are parasites on plants and animals.
• The vegetative body is mycelium which is well developed, profusely branched and coenocytic.
• The absence of motile sexual or asexual cells.
• The asexual reproduction takes place by sporangiospores, aplanospores or by conidia.
• Sexual reproduction occurs by conjugation of gametangia resulting in the formation
of zygospore.
• Examples; Rhizopus, Mucor etc.
Ascomycetes
• The species of ascomycetes are called the sac fungi because they produce sexual pores within the
sac-like vascus.
• Ascomycetes are mostly terrestrial occurring as saprophytes or parasites.
• They have well-developed, branched, septate mycelium except yeast. Yeast is a unicellular fungus.
• Asexually they reproduce by non-motile spores, conidia, oidia or chlamydospores.
• Sexual reproduction takes place by the fusion of gametangia of opposite mating types.
• There is absence of motile cells.
• Examples, Saccharomyces cerevisiae, Penicillium, Aspergillus etc.
Basidiomycetes
• The members of basidiomycetes are saprophytic or parasitic. The group is named basidiomycetes
as they produce the basidiospores at the club-shaped basidium during sexual reproduction.
• Mycelium is highly developed, profusely branched and septate.
• The mycelia are differentiated into two mating types; (+ve) and (-ve).
• There are two kinds of mycelium; primary mycelium and secondary mycelium.
• Asexual reproduction takes place by fragmentation, budding, oidia, conidia or chlamydospore.
• The dikaryotic cell is formed during sexual reproduction.
• The absence of motile cell throughout the life cycle.
• These are the most advanced fungi as their fructifications are often large and prominent.
• Examples; Mushrooms, Puccinia, Ustilago etc.
• Deuteromycetes compromises more than 17000 species of the diverse habits and habitats. It is
considered as an artificial class of fungi.
• The fungi are saprophytes as well as parasites.Parasitic fungi cause serious diseases to plants,
animals including human beings.
• Some of them are unicellular while others are multicellular.
• They reproduce asexually by conidia along with some other types of spores.
• The sexual reproduction is entirely absent.
• The asexual stage or imperfect stage in Deuteromycetes is well defined. But the sexual or perfect
stage is absent in life cycle, therefore, they are called ‘Fungi Imperfecti’.
• Example; Alternaria, Fusarium, Helminthosporium etc.
o Classification based on medically important fungi
Mycoses are classified as superficial, cutaneous, subcutaneous, or systemic (deep) infections
depending on the type and degree of tissue involvement and the host response to the pathogen.
a. Superficial mycoses (or tineas): Occur in the tropics and are restricted to the outer surface of
the hair and skin, e.g., Piedraia hortae.
b. Cutaneous mycoses: There are three genera of fungi (Microsporum, Trichophyton and
Epidermophyton) that commonly cause disease in the non-living tissues of skin, hair, or
nails/claws of people and animals, by growing in a zone just above where the protein keratin is
deposited.
c. Subcutaneous mycoses: They are normally saprotrophic inhabitants of soil, particularly in
tropical and subtropical areas of Africa, India and South America.
d. Systemic mycoses are infections that affect the whole body. We divide these into mycoses due
to primary (usually dimorphic) virulent pathogens, and those due to opportunistic pathogens.
• Deep mycoses are caused by primary pathogenic and opportunistic fungal pathogens.
• The primary pathogenic fungi are able to establish infection in a normal host; whereas,
opportunistic pathogens require a compromised host in order to establish infection (e.g., cancer,
organ transplantation, surgery, and AIDS).
• The primary deep pathogens usually gain access to the host via the respiratory tract.
Opportunistic fungi causing deep mycosis invade via the respiratory tract, alimentary tract, or
intravascular devices.
• The primary systemic fungal pathogens include Coccidioides immitis, Histoplasma capsulatum,
Blastomyces dermatitidis, and Paracoccidioides brasiliensis.
The branch of botany that deals with the fungi is called mycology and the scientist who is
concern with the fungi is called a mycologist.
P. A. Micheli known as father of mycology whereas E. J. Butler refer to as father of Indian
mycology.
Fungi are eukaryotic organisms means they have true nucleus which are enclosed in membranes.
Fungi have cell walls (plants also have cell walls, but animals have no cell walls).
They reproduce by means of spores. There are sexual and asexual spores. Sexual spores are
Oospores, Zygospores, Ascospores, Basidiospores, etc. and Asexual spores are Sporangiospores,
Aplanospores, Zoospores, Conidia, etc.
Depending on the species and conditions both sexual and asexual spores may be produced.
Fungi exhibit the phenomenon of alteration of generation. They have both haploid and diploid
stage.
KEY POINTS
Fungi are achlorophyllous, which means they lack the chlorophyll pigments present in the
chloroplasts in plant cells and which are necessary for photosynthesis.
As they are achlorophyllous, therfore, they do not have the ability to make their own food.
The vegetative body of the fungi may be unicellular or composed of microscopic threads called
hyphae. Hyphae can grow and form a network called a mycelium.
The structure of cell wall is similar to plants but chemically the fungi cell wall are composed of
chitin (C8H13O5N)n.
Fungi are heterotrophic organisms. They obtains its food and energy from organic substances,
plant and animal matters.
Fungi digest the food first and then ingest it to accomplish this the fungi produce exoenzymes
like Hydrolases, Lyases, Oxidoreductase, Transferase, etc. Fungi store their food as starch.
Fungi are saprophytes (gets energy from dead and decaying matters), or parasites (lives in a host,
attack and kill) or symbionts (mutually beneficial).
Optimum temperature of growth for most saprophytic fungi is 20-30°C while (30-37)°C for
parasitic fungi. Growth rate of fungi is slower than that of bacteria.
Reproduction in fungi is both by sexual and asexual means. Sexual state is referred to as
teleomorph (fruiting body), asexual state is referred to as anamorph (mold like).
KEY POINTS
Asexual reproduction methods are: fragmentation, somatic budding, fission, asexual spore
formation. Sexual methods are: gametic copulation, gamate-gametangium copulation,
gametangium copulation, somatic copulation and Spermatization.
Some fungi are macroscopic and can be seen by naked eyes. Mold or mushrooms are examples of
macroscopic form of fungi.
In 1991, a landmark paper estimated that there are 1.5 million fungi on the Earth. Only about 300
species of fungi are infectious to human.
The classification of fungi is designed mainly for practical application but it also bears some
relation to phylogenetic considerations.
The fungi can be classified according to the various parameters including; Classification based on
taxonomy hierarchy, Classification based on spore Production, Classification of medically
important fungi, Classification based on route of acquisition, Classification based on virulence
Alexopolous and Mims proposed fungal classification in 1979. They place the fungi including the
slime molds in the kingdom mycetae. They divide the kingdom mycetae into three divisions
namely: Gymnomycota, Mastigomycota and Amastigomycota
Martin (1965) proposed a classification according to the spore formation in fungi and divide the
division mycota into two sundivision; Myxomycotina and Eumycotina.
Classification based on medically important fungi divided the fungi into superficial mycoses,
cutaneous mycoses, subcutaneous mycoses and systemic mycoses.
TERMINOLOGY
Arbuscular Mycorrhiza (AM): (A mycorrhiza) where fungi from the Glomeromycota penetrate
the roots of a (usually herbaceous) plant and provide the plant with water and nutrients while
the plant supplies sugars to the fungus
Ascocarp: Fruitbody of an ascomycete fungus
Ascomycetes: A - Class of fungi that produce their spores in sac-like cells called asci
Ascospores: Sexual spores produced in the asci of ascomycetes fungi
Ascus: (Pl., asci) the spore-producing cell of an ascomycetes fruitbody
Basidiocarp: Fruitbody of a basidiomycete fungus
Basidiomycetes: A - Class of fungi that produce their spores on basidia
Basidiocarp: Fruitbody of a basidiomycete fungus
Basidiospores: Sexual spores produced on the basidia of basidiomycetes fungi
Basidium: (Pl., basidia) spore-producing cell of a basidiomycete fungus
Cellulose: Component of plant cell walls and of wood composed of glucose units
Chlamydospores: Asexual spores formed by the breaking up of fungal hyphae
Clamp Connection: Swollen area formed around septum in a hypha during cell division
Coprophilous: Growing on dung
Cuticle: The surface layer of the cap or stem of a fruitbody
Deuteromycetes: Obsolete term for a group fungi not known to reproduce sexually
Dichotomous: Forking/divided into pairs – as in logical decision-making trees
Dikaryon: A pair of closely associated, sexually compatible nuclei
Ectomycorrhiza (EM) : (A mycorrhiza) where the fungus forms sheathes around plant rootlets
(often of a tree), growing between but not penetrating the cells of the plant root, and providing
the plant with water and nutrients while the plant supplies sugars to the fungus
Endomycorrhiza: Mycorrhiza in which fungal hyphae penetrate cell walls of host plant
Endophyte: Fungus living within a plant without causing visible symptoms of harm
TERMINOLOGY
Hypha: (Pl., hyphae) filamentous thread of fungal mycelium
Inferior: (Describing a ring) located near the base of the stem
Lichen: Organism comprising a fungus and an alga or a cyanobacterium
Mucilaginous: (Often describing a mushroom cap) covered with slime
Mycelium: Body of a fungus, most of which is underground or hidden within wood
Mycobiont: The fungal component of a lichen or of a mycorrhizal partnership
Mycology: The study of fungi
Mycorrhiza: Structure by which a fungus and a plant exchange nutrients mutually
Myxomycetes: A large and commonly encountered group within the slime moulds
Organelle: A differentiated (separate) structure within a cell
Parasitism: Process whereby an organism feeds at the expense of another (host)
Photosynthesis: Process by which plants convert carbon dioxide and water to sugars
Rhizomorph: A root-like mycelial strand comprising bunched parallel hyphae
Saprophyte: An organism that obtains its nutrients from dead organic material
Septate: (Describing hyphae) partitioned by cross walls known as septa
Septum: (Pl., septa) a cross wall separating cells of a hyphal thread
Slime Moulds: A group of fungus-like organisms that use spores to reproduce
Spore: Reproductive structure of a fungus, usually a single cell
Sporophore: Fungal fruitbody
Superior: (Describing a ring) located near the top of the stem
Taxonomy: The - Classification of organisms based on their natural relationships
Thallus: (Pl., thalli) the body of a fungus or a lichen
Uredinales: Rust fungi (an order within the Basidiomycota)
Zygomycota: A - Class of simple fungi whose hyphae generally lack cross walls
SOME QUESTIONS RELATED TO THE LECTURE
Question 1: What do you understand by fungi?