Lecture 1 - Laboratory Management and Biosafety
Lecture 1 - Laboratory Management and Biosafety
Biosafety
Laboratory Management
Laboratory Management
Collection of specimens
Subcontracting
quantity/concentration
immunizations/prophylaxis;
Biosafety Level 2
With good microbiological techniques, these
agents can be used safely handled on the open
bench, provided the potential for producing
splashes or aerosols is low.
Personal protective equipment should be used as
appropriate, such as splash shields, face
protection, gowns, and gloves.
Laboratory Biosafety
Biosafety Level 2
Procedures with aerosol or high splash potential
must be conducted in primary containment
equipment, or in devices such as a BSC.
Secondary barriers, such as hand washing sinks
and waste decontamination facilities, must be
available to reduce potential environmental
contamination.
Examples of microbial agents handled???
Laboratory Biosafety
Biosafety Level 3
Practices, safety equipment, and facility design
and construction are applicable to clinical,
diagnostic, teaching, research, or production
facilities in which work is done with indigenous
or exotic agents with a potential for
respiratory transmission, and which may cause
serious and potentially lethal infection.
Primary hazards to personnel working with
these agents relate to autoinoculation,
ingestion, and exposure to infectious aerosols.
Laboratory Biosafety
Biosafety Level 3
Use of primary and secondary barriers.
All laboratory manipulations should be
performed in a BSC or other enclosed
equipment, such as a gas-tight aerosol
generation chamber.
Secondary barriers include controlled access
to the laboratory and ventilation requirements
that minimize the release of infectious
aerosols from the laboratory.
Examples of microbial agents handled???
Laboratory Biosafety
Biosafety Level 4
Practices, safety equipment, and facility design
and construction are applicable for work with
dangerous and exotic agents that pose a high
individual risk of life-threatening disease, which
may be transmitted via the aerosol route and for
which there is no available vaccine or therapy.
The primary hazards to personnel working with
BSL-4 agents are respiratory exposure to
infectious aerosols, mucous membrane or broken
skin exposure to infectious droplets, and
autoinoculation.
Laboratory Biosafety
Biosafety Level 4
Use of Class III BSC or full-body, air-supplied
positive-pressure personnel suit.
The BSL-4 facility is generally a separate
building or completely isolated zone with
complex, specialized ventilation requirements
and waste management systems to prevent
release of viable agents to the environment.
Laboratory Biosafety
Biosafety Level 4
Examples of microbial agents handled???
misuse or
intentional release of pathogens.
Laboratory Biosecurity
“Laboratory biosafety” describes the
containment principles, technologies and
practices that are implemented to prevent
unintentional exposure to pathogens and toxins,
or their accidental release.
“Laboratory biosecurity” refers to
institutional and personal security measures
designed to prevent the loss, theft, misuse,
diversion or intentional release of pathogens
and toxins.
Laboratory Biosecurity
Effective biosafety practices are the very
foundation of laboratory biosecurity activities.
Through risk assessments, performed as an
integral part of an institution’s biosafety
programme, information is gathered regarding
the type of organisms available, their physical
location, the personnel who require access to
them, and the identification of those
responsible for them.
Laboratory Biosecurity
A specific laboratory biosecurity programme
must be prepared and implemented for each
facility according to the requirements of the
facility, the type of laboratory work conducted,
and the local conditions.
National standards should be developed that
recognize and address the ongoing responsibility
of countries and institutions to protect
specimens, pathogens and toxins from misuse.
Laboratory Biosecurity
Personnel Suitability/Reliability
Background checks and security clearances, photo
identification badges for employees and
temporary badges for escorted visitors
Procedures are needed for approving and granting
visitors access to controlled areas.
Biosecurity training needs to be provided to all
personnel who are given access.
Laboratory Biosecurity
Pathogen Accountability
Inventory requirements for proper labelling,
tracking of internal possession, inactivation and
disposal of cultures after use, and transfers
within and outside the facility.
These inventory controls also assist in keeping
track of pathogen storage locations and under
whose responsibility the pathogens lie.
The record keeping should include pathogen
inventories, who has access to agents, who has
access to areas where agents are stored or used,
as well as transfer documents.
Laboratory Biosecurity
Pathogen Accountability
Inventories must be updated regularly
A notification process for identifying, reporting,
and remediating security problems, i.e., inventory
discrepancy, equipment failure, breach of
security, release of agents, etc., should be in
place.
Laboratory Biosecurity
Biosecurity Incident and Emergency Response
A protocol for reporting and investigating
security incidents e.g., missing infectious
substances, unauthorized entry, should be
established.
Biosecurity incident and emergency plans should
include response to intentional (bomb threats
etc.), unintentional (accidental release) and
natural events (power outages, severe weather).
Training needs to be provided to all relevant
personnel.
Laboratory Biosecurity
Biosecurity Incident and Emergency Response
Expert advice from security and/or law
enforcement experts should be sought in the
development of threat assessments and security
protocols specific to each facility.
The threat assessment and security practices
should be regularly reviewed and updated to
reflect new threats that may be identified.
Laboratory Biosecurity
Laboratory biosecurity measures should not
hinder the efficient sharing of reference
materials, clinical and epidemiological specimens
and related information necessary for clinical or
public health investigations.
Legitimate access to important research and
clinical materials must be preserved.
There should be regular risk and threat
assessments, and regular review and updating of
procedures.
Quality Assurance
RIGHT RESULT,
at the right TIME,
on the right SPECIMEN,
from the right PATIENT,
proficiency surveillance
standardization.
Quality Assurance
iv) Standardization:
A material standard or reference preparation is
used to calibrate analytical instruments and to
assign a quantitative value to calibrators.
A reference method is an exactly defined
technique which provides sufficiently accurate
and precise data for it to be used to assess the
validity of other methods.
Quality Assurance
Implementing QA requires:
Preparation and use of Standard Operating
Procedures (SOPs) with details of QC for all
laboratory tests and activities.
System for monitoring whether test results are
delivered in time to influence clinical and public
health decision making.
Policies that enable a laboratory to operate
reliably, effectively, and in harmony with the
other departments and service providers.
Quality Assurance
QA is defined by three main activities:
Competent personnel
Use of SOPs
Analytical QA
This stage includes those activities employed
during performance of test.
It is mainly concerned with the control of errors
during the actual analysis of materials and also
verification of test results.
Analytical QA is mainly effected by the use of
SOPs.
Quality Assurance
Analytical QA
SOPs are required for the following reasons:
To provide users with written instructions on
how to perform tests consistently to an
acceptable standard in their laboratory.
To prevent changes in the performance of
tests with new users.
To improve and maintain the quality of lab
service to patients and identify problems
associated with poor work performance.
Quality Assurance
Analytical QA
SOPs are required for the following reasons:
To make clinical and epidemiological
interpretation of test results easier by
standardizing the procedure.
To provide written standardized techniques for
use in the training of laboratory personnel.
To facilitate the preparation of a list and
inventory of essential reagents, chemicals and
equipment.
To promote safe laboratory practice.
Quality Assurance
Post-analytical QA
This includes
calculation
Recording
Reporting
verification of test results
taking appropriate action whenever a result has
serious clinical implication
ensuring test results are interpreted correctly.
Quality Control
Quality Control
The term quality control covers that part of
quality assurance, which primarily concerns the
control of errors in the performance of tests
and verification of test results.
QC must be practical, achievable, affordable,
and above all continuous.
Quality control involves the use of a variety of
methods or techniques to reduce variance in
analytical procedures
Quality Control
Specificity
Efficiency
Predictive values
Quality Standards and
Certification
Quality Standards
HISTORICAL BACKGROUND
In the past laboratory quality was not
questioned –it was assumed.
Until the mid-1970’s regulatory agencies
assumed that reports of ‘test’ data were
accurate and were generated according to
expected quality standards.
Similarly, the invisible ‘hazards’ of working in a
laboratory were largely ignored .
Quality Standards
HISTORICAL BACKGROUND
US FDA and US EPA audit of laboratory data
supporting two new drug applications indicated :
1. Poorly designed experiments.
2. Poor execution.
3. Inaccurate reporting of test results
HISTORICAL BACKGROUND
The first laboratory quality regulations were
passed in the early 1980’s.
Quality Standards
Egs of International Quality Standards
Principles of Good Laboratory Practice
ISO 9001 - Management Standards
ISO 17025: 2005 - Competency of Testing and
Calibration Lab
ISO 15189 - Medical Lab
ISO 43 - Proficiency Testing Lab
Quality Standards
ISO/IEC 17025:2005
This specifies the general requirements for the
competence to carry out tests and/or
calibrations, including sampling.
It covers testing and calibration performed
using standard methods, non-standard methods,
and laboratory-developed methods.
Contains management requirements and technical
requirements
Quality Standards
ISO/IEC 17025:2005 Requirements
Quality Management Plan and associated written
procedures and policies
Implementation of a full laboratory quality
system
Internal audits
Correction of non-conformities and improvement
in laboratory efficiency with respect to quality
systems
Continuing review of quality systems to ensure
their continued suitability and effectiveness
Quality Standards
ISO/IEC 15189: Medical Laboratories,
Particular requirements for quality and
compliance
Sample collection, transportation and
identification
Sample processing
Test validation and interpretation
Disease and patient management and advice
Staff experience and training
Quality Assurance and Quality Control systems
Quality Standards
Laboratory safety necessitates:
Recognition of hazards
Effective control of hazards
Safety-focused attitude
Good personal behavior
Good housekeeping
Continual practice of good laboratory technique
Quality Standards
Egs of standards to guide and/or regulate
laboratory safe working practices:
ISO 15190: Medical laboratories - Requirements
for safety
ISO 15189: Medical laboratories – Particular
requirements for quality and compliance
Clinical and Laboratory Standards Institute
(CLSI): Clinical Laboratory Safety (GP17
guideline)
CLSI: Protection of Laboratory Workers from
Occupationally Acquired Infections (M29)
Quality Standards