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Metabolic Profiling Methods and Protocols 1st Edition
Thomas O. Metz Digital Instant Download
Author(s): Thomas O. Metz
ISBN(s): 9781617379840, 1617379840
Edition: 1
File Details: PDF, 6.50 MB
Year: 2011
Language: english
TM
ME T H O D S IN MO L E C U L A R BI O L O G Y
Series Editor
John M. Walker
School of Life Sciences
University of Hertfordshire
Hatfield, Hertfordshire, AL10 9AB, UK
Edited by
Thomas O. Metz
Biological Sciences Division, Pacific Northwest National Laboratory,
Richland, WA, USA
Editor
Thomas O. Metz
Pacific Northwest National Laboratory
Biological Sciences Division
P.O. Box 999, MS K8-98
Richland, WA 99352
USA
[email protected]
ISSN 1064-3745
ISBN 978-1-61737-984-0
DOI 10.1007/978-1-61737-985-7
Springer New York Dordrecht Heidelberg London
Thomas O. Metz
References
v
Contents
Preface . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . v
Contributors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ix
1. Origins of Metabolic Profiling . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
Arthur B. Robinson and Noah E. Robinson
2. Amino Acid Profiling for the Diagnosis of Inborn Errors of Metabolism . . . . . 25
Monique Piraud, Séverine Ruet, Sylvie Boyer, Cécile Acquaviva,
Pascale Clerc-Renaud, David Cheillan, and Christine Vianey-Saban
3. Acylcarnitines: Analysis in Plasma and Whole Blood Using Tandem Mass
Spectrometry . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 55
David S. Millington and Robert D. Stevens
4. Analysis of Organic Acids and Acylglycines for the Diagnosis of Related
Inborn Errors of Metabolism by GC- and HPLC-MS . . . . . . . . . . . . . . 73
Giancarlo la Marca and Cristiano Rizzo
5. HPLC Analysis for the Clinical–Biochemical Diagnosis of Inborn Errors
of Metabolism of Purines and Pyrimidines . . . . . . . . . . . . . . . . . . . . 99
Giuseppe Lazzarino, Angela Maria Amorini, Valentina Di Pietro,
and Barbara Tavazzi
6. Bile Acid Analysis in Various Biological Samples Using Ultra
Performance Liquid Chromatography/Electrospray Ionization-Mass
Spectrometry (UPLC/ESI-MS) . . . . . . . . . . . . . . . . . . . . . . . . . . 119
Masahito Hagio, Megumi Matsumoto, and Satoshi Ishizuka
7. Analysis of Glycolytic Intermediates with Ion Chromatography- and Gas
Chromatography-Mass Spectrometry . . . . . . . . . . . . . . . . . . . . . . . 131
Jan C. van Dam, Cor Ras, and Angela ten Pierick
8. Analysis of the Citric Acid Cycle Intermediates Using Gas
Chromatography-Mass Spectrometry . . . . . . . . . . . . . . . . . . . . . . . 147
Rajan S. Kombu, Henri Brunengraber, and Michelle A. Puchowicz
9. Quantification of Pentose Phosphate Pathway (PPP) Metabolites
by Liquid Chromatography-Mass Spectrometry (LC-MS) . . . . . . . . . . . . 159
Amber Jannasch, Miroslav Sedlak, and Jiri Adamec
10. High-Performance Liquid Chromatography-Mass Spectrometry
(HPLC-MS)-Based Drug Metabolite Profiling . . . . . . . . . . . . . . . . . . 173
Ian D. Wilson
vii
viii Contents
ix
x Contributors
Abstract
Quantitative metabolic profiling originated as a 10-year project carried out between 1968 and 1978 in
California. It was hypothesized and then demonstrated that quantitative analysis of a large number of
metabolites – selected by analytical convenience and evaluated by computerized pattern recognition –
could serve as a useful method for the quantitative measurement of human health. Using chromato-
graphic and mass spectrometric methods to measure between 50 and 200 metabolites in more than
15,000 human specimens, statistically significant and diagnostically useful profiles for several human dis-
eases and for other systematic variables including age, diet, fasting, sex, and other variables were demon-
strated. It was also shown that genetically distinct metabolic profiles for each individual are present in
both newborn infants and adults. In the course of this work, the many practical and conceptual problems
involved in sampling, analysis, evaluation of results, and medical use of quantitative metabolic profiling
were considered and, for the most part, solved. This article is an account of that research project.
Key words: Metabolic profiling, metabolomics, urine, breath, chromatography, mass spectrometry,
aging, diagnostic medicine, preventive medicine.
1. Introduction
1
2 Robinson and Robinson
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