THESIS Report File On Topiv
THESIS Report File On Topiv
MASTEROF
SCIENCEIN
BIOTECHNOLOGY
Submittedby:
Anshika Tyagi
Underthesupervisionof:
DepartmentofBiotechnology,M.I.E.T.,Meerut
N.H.58, Delhi-
RoorkeeHighway,BaghpatRoadBypassCrossingMeerut-
250002,U.P.Ph:-0121-2439019,Fax:-0121-2439057
ACKNOWLEGDGEMENTS
Research is an ever evolving discipline which needs the close co-operation of friends, colleague
andthe guidance of experts in the field to achieve something worthwhile and substantial to reach
thepinnacleofsuccessin scientificattributes.
IamhighlyobligedtoDr.ShaliniSharma(Principal,DepartmentofBiotechnologyandMicrobiology),M
eerutInstitute ofEngineeringAnd Technology,
Meeruttoarrangeformyprojectintheiresteemedorganization.
Last but not theleast I wish to express my appreciation and regards toMy Parents and AlmightyGod
whohas been the source of motivation, strength andsupport,which ledme toattain success.No amount
of thanks would express the gratitude towards them, as their unconditional love
andaffectionandunfailingsupportwhichhavedirectedmetoachievemygoal.
I wish tothank each andevery individual whom I amfailedtomention personally
forhisorherhelpwithouttheirsupporttheworkwouldnothavebeenpossible.
ANSHIKA TYAGI
Table of Contents
ABSTRACT ............................................................................................................................................ 4
REVIEW OF LITERATURE................................................................................................................ 8
RESULTS .............................................................................................................................................. 17
CONCLUSION ..................................................................................................................................... 19
ACKNOWLEDGMENTS .................................................................................................................... 20
REFERENCES ..................................................................................................................................... 21
Abstract
This study aimed to isolate and determine the characteristics of lactic acid bacteria (LAB) from raw cow
Lactic acid bacteria are found naturally in raw cow milk as indigenous microbiota and are
utilized as a starter culture to make fermented dairy products. Lactic acid bacteria were recovered from
raw cow milk samples in this study. The serial dilutions of raw milk were made and plated onto M17
agar containing thallium acetate and adjusted to pH 5.5 with lactic acid. The isolates wereidentified
The spotted LAB isolates were characterized as Lactobacillus, Lactococcus, and Leuconostoc.
Keywords: Raw cow milk. Lactic acid bacteria. Isolation. Morphology.Serial dilution
Figure 1. Bacterial structure and morphology. From Hart and Shears, 1997. (Source)
Introduction
Lactic acid bacteria (LAB) are an industrially important group of bacteria and used as starter cultures for
the production of fermented milk products (e.g. yoghurt and some cheeses) in the dairy industry. LAB contain the
Weissella (HORVATH et al., 2009). These groups of bacteria have been isolated from the raw materials of food,
such as raw milk (CORROLER et al., 1998; RODRIGUEZ et al., 2000; TULINI et al., 2016; ASPRI et al., 2017;
PERIN et al., 2017), plants (ALEMAYEHU et al., 2014), meat (EGAN, 1983), vegetables (KELLY et al., 1998),
and fruits (CHEN et al., 2017). Natural habitats, including the indigenous flora of raw milk, can be good source
of novel LAB strains with the potential desirable properties for use in the production of novel fermented dairy
products (CORROLER et al., 1998; RODRIGUEZ et al., 2000; WOUTERS et al., 2002; DELAVENNE et al.,
2012; TULINI et al., 2016; PERIN; NERO, 2014). The most frequently isolated LAB genera from raw milk and
dairy products that were made from raw milk were Enteroccoccus, Lactococcus, Lactobacillus, Leuconostoc, and
Streptococcus (PERRY; SHARPE, 1960; FRANCIOSI et al., 2009). The major sources of bacteria in raw milk
are from within the udder, the exterior of the teats and the udder, the milking machine, the storage equipments,
the housing, bedding, feed, air and water (QUIGLEY et al., 2013).
Cow Milk is a pale liquid produced by the mammary glands of cow. It is the primary source of
nutrition for infant mammals before they are able to digest other types of food. It contains many other
nutrients including protein and lactose (Pehrsson et al., 2000). Moreover, Milk itself is known as one
of the natural habitats of lactic acid bacteria (LAB) (Delavenne et al., 2012), (Wouters et al.,2002).
Lactic acid bacteria (LAB) are a group of Gram- positive, non-sporulating, anaerobic or facultative
aerobic cocci or rods, which produce lactic acid as one of the main fermentation products of the
metabolism of carbohydrates (Axelsson., 2004), (Hayek and Ibrahim., 2013). Lactic acid bacteria
(LAB) are naturally present in milk and milk products. LAB is generally associated with habitat rich
in nutrients such as milk, cheese, meat, beverages and vegetables. In addition, (Tserovska et al.,
2002), (Chen et al.,2005)
showed that lactic acid bacteria could be also isolated from soil, lakes, intestinal tract of animals and
humans. Lactic acid bacteria (LAB) have been used for the fermentation of food and feed products
since ancient days and today their major applications are still in the food and feed industry as starter
cultures (Desmons et al., 1998), (Boonmee et al.,2003).Lactic acid bacteria are the most important
bacteria in desirable food fermentations, being responsible for the fermentation of sour dough bread,
fermented foods and beverages, all fermented milks and fermented vegetables. It plays an essential
role in the production of all dairy products and is involved in the production of many other fermented
foods and beverages, sausages, pickles, boza etc. Based on the end product of glucose fermentation
lactic acid bacteria are grouped as either Homofermenters or Heterofermenters. The Homofermenters
producelactic acid as the major product of fermentation of glucose. The Heterofermenters produce
lactic acid, carbon dioxide, acetic acid, and ethanol from the fermentation of glucose. According to
(Sharma et al., 2012), (Steele et al., 2013) LAB are recognized for their fermentative ability and thus
enhancing food safety, improving organoleptic attributes, enriching nutrients and increasing health
benefits Many LAB species play an important role in the ripening process of cheese, especially to
improve the consistency, aroma and flavor (Hannon et al., 2003), (Duan et al., 2008). Certain LAB
strain characterized by their ability to transform lactose and improves the digestibility of fermented
dairy products (Weinberg et al., 2007) as well as their preservation (Abdelbasset and Djamila., 2008).
They also employed for improvement of the taste, texture and viscosity in the manufacture of dairy
products (Soukoulis et al., 2007). Lactic acid bacteria can be recovered from fermented foods and
beverages, vegetables, milk and milk products. The objective of the study was to isolate and identify
naturally occurring lactic acid bacteria from raw cow milk.
.
Review of Literature
Lactic acid bacteria are Gram-positive, non-spore-forming, non-respiring but aerotolerant, which
produce lactic acid as one of the key fermentation products by utilizing carbohydrates during
fermentation. These bacteria produce lactic acid as an end product of carbohydrate catabolism and also
make organic substances that contribute to the flavor, texture, and aroma that result in unique
organoleptic characteristics (SADISHKUMAR et al., 1998). Orla Jensen (1919) first published a
monograph that laid the foundation for classifying lactic acid bacteria. This system of classification was
linked to certain factors that entailed the following; glucose fermentation characteristics, cell
morphology, capacity to utilize sugars, and optimum growth temperature range. This classification
system thus recognized only four lactic acid bacteria genera: Lactobacillus, Pediococcus, Leucononstoc,
Figure 2. Schematic representation of the worldwide occurrence (left) and multiple health applications (right) of lactic acid
bacteria. (Source)
Lactic acid bacteria has also been classified into different genera/species based on their acid
production characteristics by fermenting sugars and its growth at specific temperatures (PARVEZ et al.,
2006). Additionally, the lactic acid bacteria can be classified as homofermentative or heterofermentative
organisms based on their ability to ferment carbohydrates (MOKOENA et al., 2017). The
homofermentative lactic acid bacteria such as Lactococcus and Streptococcus yield two molecules of
lactates from one glucose molecule whereas heterofermentative lactic acid bacteria such as
Leuconostoc, Wiessella, and some lactobacilli generate lactate, ethanol, and carbon dioxide from one
molecule of glucose (SALMINEN et al., 1998). The conventional approach to lactic acid bacteria
classification was based on physiological and biochemical characteristics; however, more recently,
molecular characterization has become an important tool for classification and identification of lactic
acid bacteria. Molecular characterization includes random amplified polymorphic DNA profiling, 16S
rRNA gene sequencing, PCR-based fingerprinting, and soluble protein patterns (SHARMA et al., 2020)
and differentiation of species by multiplex PCR assay by using specific recA derived primers (NI et al.,
2015).
The genus Lactobacillus has recently been reclassified by scientists into 25 genera. This
reclassification was necessitated due to the extent of how diverse the original genus was, which made it
very challenging to classify, name, and distinguish between different lactobacilli (ZHENG et al., 2020).
The new genera are Lactobacillus, Paralactobacillus and the 23 novel genera. The twenty three (23)
2020).
Figure 3. Some probiotic strains giving a brief idea of LAB’s cell morphology. (Source)
Lactic acid bacteria constitute a ubiquitous bacterial group that is widespread in nature in niches
of dairy (fermented), meat and vegetable origin, the gastrointestinal and urogenital tracts of humans and
animals, and soil and water (LIU et al., 2014). The ecology of lactic acid bacteria has transitioned over
time from theirsoil and plant habitats to the gut of mammals. The mammalian intestine is a repository of
100 trillion microorganisms generally called microbiota (HOOPER et al., 2010). The microbiota
colonizes the gastrointestinal tract and is essential for health by enhancing metabolism, digestion and
boosts the immune system (HOOPER et al., 2010). The microbiota is well adapted to the mammalian
gut, based mainly on three factors which include adhesion to intestinal cells, resistance to host barriers,
and substrate fermentation in the gut (LEBEER et al., 2008). Bile salts and low pH also affect the lipid
membrane composition of the microbiota (RUIZ et al., 2013). The adhesion of lactic acid bacteria to the
intestinal cells is facilitated by the action of peristalsis which is coupled with lubrication from mucins
that protect and line the epithelial intestinal cells. This coordination thus ensures an increased adherence
capacity of lactic acid bacteria to the intestinal cells (CORFIELD et al., 2000). Intestinal mucins are
thus very important as their continuous production impedes and prevents pathogenic bacteria from
adhering to the intestinal epithelial cells, thus promoting the activity of resident intestinal bacteria.
Consequently, these gastrointestinal bacteria serve as a barrier system that acts against pathogens
(MOAL et al., 2006). Antimicrobial substances that are produced by Lactobacillus and Bifidobacterium
spp. have been confirmed to possess antimicrobial properties that are exerted against enteropathogenic
bacteria linked to causing diarrhea against (SERVIN et al., 2004), and both genera can exert an
inhibitory effect on the action of pathogenic enteric bacteria (MOAL et al., 2006).
Lactic acid bacteria are among the most important groups of microorganisms used in food
fermentations. They contribute to the taste and texture of fermented products and inhibit food spoilage
bacteria by producing growth-inhibiting substances and large amounts of lactic acid. As agents of
fermentation LAB are involved in making yogurt, cheese, cultured butter, sour cream, sausage,
cucumber pickles, olives and sauerkraut, but some species may spoil beer, wine and processed meats.
It can be challenging to isolate lactic acid bacteria (LAB) from raw milk that has been
refrigerated without pre-incubation since the flora tends to be dominated by Gram-negative bacteria and
There is no single agar medium that is suitable for the selective isolation of strains all genera of
While selective media can be used for some LAB including lactobacilli, some streptococci
including faecal streptococci, leuconstocs and pediococci general purpose growth media and incubation
conditions generally need to be adapted for projects. M17 (Terzaghi and Sandine, 1975) which is a good
general purpose growth medium is generally not selective for LAB. While some strains of Lactobacillus
delbrueckii subsp. bulgaricus are inhibited by the β-glycerophosphate present in M17, caution should be
subsp. bulgaricus.
MRS MRS + GP
0 9
No Growth
1 29
Poor Growth
0 1
Medium Growth
57 13
Good Growth
*No. of strains (58 tested). From: Shankar and Davies (1977) (Source)
Effect of β-glycerophosphate (1.9 %) on growth of L. delbrueckii subsp. bulgaricus strains in MRS broth. Incubation at 37°C
for 48 h
Note that 23% of the L. delbrueckii subsp. bulgaricus strains tested grew well on M17 indicating
the need for authors using this medium to enumerate Str. thermophilus in an environment containing L.
delbrueckii subsp. bulgaricus to confirm the absence of L. delbrueckii subsp. bulgaricus (Gram stain
The simplest method for isolating LAB from raw milk is probably to use M17 or preferably
PLGYG agar (Mullan et al., 1981) containing thallium acetate and adjusted to pH 5.5 with lactic acid.
As discussed M17 is inhibitory to many strains of L. bulgaricus. The thallium acetate inhibits the
growth of Gram-negative bacteria, the usual concentration is 1 part in 2000 parts of media (Harrigan
and McCance, 1998). The lactic acid and the lower pH provide a more selective environment for LAB.
The lactic acid is added aseptically to the agar media after sterilisation and prior to use. The selective
pressure can be increased further by e.g. lowering the pH below 5.5, addition of salts e.g. sodium
chloride, sodium or calcium lactate, sodium acetate, replacing the glucose with sucrose or other sugars
and using antibiotics (Billlie et al, 1992). Incubation temperature can be varied (e.g. 30°C for
Cocci in
Lactococcus chains Homo L 33-37 -
D/L, D,
Lactobacillus Rods Homo/hetero L 32-53 ±
Cocci in
Streptococcus chains Homo L 40 -
The differential characteristics listed in the table are based on phenotypic properties and despite
their limited validity in current microbial classification they are still used and provided the limitations are
Molecular and chemotaxonomic methods are being used to assign genus and species designations. The
extent of DNA–DNA and DNA–rRNA hybridization, similarity between profiles produced by restriction
mapping of chromosomal DNA, and the nucleotide sequence of the 16S and 32S RNAs have been found to be
particularly useful in the creation of the genus. Additional methods, including serology, also have provided
further evidence for the validity of genus designation (e.g., antisera) against purified superoxide dismutase, which
has been used to demonstrate a similarity between lactococci but not streptococci or enterococci (Mullan,2014).
Materials and Methods
Instruments
The instruments used in this study are as follows: sterile bottles, wash bottles, pipette, M17 agar
plate, petri dish, measuring cylinder, beaker glass, stirring rod, test tubes, test tube rack, microscope,
Materials
The materials used in this study are as follows:raw cow milk, distilled water,and thallium
acetate.
All instruments washed until clean and dried. Then the instruments and materials were sterilized
Sample collection
The study was conducted to isolate and characterize the naturally occurring lactic acid bacteria from
raw cow milk. Several raw cow milk samples were aseptically taken into the sterile bottles from bulk
tanks at different dairy farms located in Meerut. Samples were collected using sterilized sample bottles
and brought to laboratory with icebox for microbiological investigation. Samples were kept in a
Serial dilutions of the milk samples were immediately made indistilled water by adding one drop
of raw cow milk in 10mL of distilled water.These dilutions were spread ontoM17 agarcontaining
thallium acetate and adjusted to pH 5.5 with lactic acid. The lactic acid was added aseptically to the agar
media after sterilization and prior to use. The plates were incubated for 48 h at 30ºC and 45ºC anaerobic
conditions. After incubation, the colonies displaying the general characteristics of lactic acid bacteria
were chosen from each plate and streaked on M17 agar plates for characterization.
Observations of colony and cell morphology was done after getting a pure culture in a petri
dish.These observations were made visually include shape, color, edges, and the elevation ofbacterial
colonies and cells. The surface of colonies and cells can be seen from the side and the edge of the
Characterization is the basis for bacterial identification. Characterization can be done based on
colony morphology, characteristic of cytology (cell type and Gram staining) and physiological
characteristics. Observed morphology in this study was colony morphology and cell morphology.
Colony morphology includes color types, edges, and elevation of colonies that observed visually, while
Colony Morphology
Colony Morphology Colony morphology of isolates bacteria are round (circle) shape (100%), has slippery
(smooth) edge (100%), the form of convex elevation (100%), and milky white (75%) and cream (25%) of colony
color.
Cell Morphology
Cell morphology was done to determine the colored smear culture under a microscope and see how the shape of
the cell. The results showed that some isolates are with rod shape of cell and some with cocci shape of cell. These
results are supported by researches (Syahrurachman, 1994) which states that the lactic acid bacteria (LAB) are in
Isolate C
Colony C
Cell Lactic Acid
A
Code M
Morphology
y M
Morphology Bacteriaa
T
Type Color Eddge Elevation C Shape
Cell
ISL-1 C
Circle Milky White
W Sm
mooth Coonvex B
Bacilli (rod) Lactobaacillus
ISL-2 C
Circle Milky White
W Sm
mooth Coonvex B
Bacilli (rod) Lactobaacillus
ISL-3 C
Circle Milky White
W Sm
mooth Coonvex C
Cocci (in Lactocooccus
c
chains)
ISL-4 C
Circle Milky White
W Sm
mooth Coonvex C
Cocci Leuconoostoc
(
(spherical)
ISL-5 C
Circle Milky White
W Sm
mooth Coonvex B
Bacilli (rod) Lactobaacillus
ISL-6 C
Circle Milky White
W Sm
mooth Coonvex B
Bacilli (rod) Lactobaacillus
ISL-7 C
Circle Milky White
W Sm
mooth Coonvex C
Cocci (in Lactocooccus
c
chains)
ISL-8 C
Circle Beige/C
Cream Sm
mooth Coonvex B
Bacilli (rod) Lactobaacillus
cow milk collected from different dairy farms in Meerut. With lactic acid bacteria belonging to the
genus Lactobacillus, Lactococcus, and Lecunostoc, were identified from eight raw cow milk samples.
The results obtained from the present study demonstrated that there is a diversity of lactic acid bacteria
in raw cow's milk. The presence of LAB in milk and milk products enhances bioavailability of nutrients
and act as a preservative. From this study, we can conclude that raw can milk is a rich source of LAB.
The local raw milk could serve as source for beneficial lactic acid bacteria in future researches.
Acknowledgments
The authors would like to acknowledge MIET and faculties of Biotechnology department for their willingness
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