10 Minutes To Pandas - Pandas 1.2.4 Documentation
10 Minutes To Pandas - Pandas 1.2.4 Documentation
4 documentation
10 minutes to pandas
This is a short introduction to pandas, geared mainly for new users. You can see more complex recipes in
the Cookbook.
Customarily, we import as follows:
In [1]: import numpy as np
Object creation
See the Data Structure Intro section.
Creating a Series by passing a list of values, letting pandas create a default integer index:
In [3]: s = pd.Series([1, 3, 5, np.nan, 6, 8])
In [4]: s
Out[4]:
0 1.0
1 3.0
2 5.0
3 NaN
4 6.0
5 8.0
dtype: float64
Creating a DataFrame by passing a NumPy array, with a datetime index and labeled columns:
In [5]: dates = pd.date_range("20130101", periods=6)
In [6]: dates
Out[6]:
DatetimeIndex(['2013-01-01', '2013-01-02', '2013-01-03', '2013-01-04',
'2013-01-05', '2013-01-06'],
dtype='datetime64[ns]', freq='D')
In [8]: df
Out[8]:
A B C D
2013-01-01 0.469112 -0.282863 -1.509059 -1.135632
2013-01-02 1.212112 -0.173215 0.119209 -1.044236
2013-01-03 -0.861849 -2.104569 -0.494929 1.071804
2013-01-04 0.721555 -0.706771 -1.039575 0.271860
2013-01-05 -0.424972 0.567020 0.276232 -1.087401
2013-01-06 -0.673690 0.113648 -1.478427 0.524988
In [10]: df2
Out[10]:
A B C D E F
0 1.0 2013-01-02 1.0 3 test foo
1 1.0 2013-01-02 1.0 3 train foo
2 1.0 2013-01-02 1.0 3 test foo
3 1.0 2013-01-02 1.0 3 train foo
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If youʼre using IPython, tab completion for column names (as well as public attributes) is automatically
enabled. Hereʼs a subset of the attributes that will be completed:
In [12]: df2.<TAB> # noqa: E225, E999
df2.A df2.bool
df2.abs df2.boxplot
df2.add df2.C
df2.add_prefix df2.clip
df2.add_suffix df2.columns
df2.align df2.copy
df2.all df2.count
df2.any df2.combine
df2.append df2.D
df2.apply df2.describe
df2.applymap df2.diff
df2.B df2.duplicated
As you can see, the columns A, B, C, and D are automatically tab completed. E and F are there as well; the
rest of the attributes have been truncated for brevity.
Viewing data
See the Basics section.
Here is how to view the top and bottom rows of the frame:
In [13]: df.head()
Out[13]:
A B C D
2013-01-01 0.469112 -0.282863 -1.509059 -1.135632
2013-01-02 1.212112 -0.173215 0.119209 -1.044236
2013-01-03 -0.861849 -2.104569 -0.494929 1.071804
2013-01-04 0.721555 -0.706771 -1.039575 0.271860
2013-01-05 -0.424972 0.567020 0.276232 -1.087401
In [14]: df.tail(3)
Out[14]:
A B C D
2013-01-04 0.721555 -0.706771 -1.039575 0.271860
2013-01-05 -0.424972 0.567020 0.276232 -1.087401
2013-01-06 -0.673690 0.113648 -1.478427 0.524988
In [16]: df.columns
Out[16]: Index(['A', 'B', 'C', 'D'], dtype='object')
DataFrame.to_numpy() gives a NumPy representation of the underlying data. Note that this can be an
expensive operation when your DataFrame has columns with different data types, which comes down to a
fundamental difference between pandas and NumPy: NumPy arrays have one dtype for the entire
array, while pandas DataFrames have one dtype per column. When you call DataFrame.to_numpy(),
pandas will find the NumPy dtype that can hold all of the dtypes in the DataFrame. This may end up
being object, which requires casting every value to a Python object.
For df, our DataFrame of all floating-point values, DataFrame.to_numpy() is fast and doesnʼt require
copying data.
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In [17]: df.to_numpy()
Out[17]:
array([[ 0.4691, -0.2829, -1.5091, -1.1356],
[ 1.2121, -0.1732, 0.1192, -1.0442],
[-0.8618, -2.1046, -0.4949, 1.0718],
[ 0.7216, -0.7068, -1.0396, 0.2719],
[-0.425 , 0.567 , 0.2762, -1.0874],
[-0.6737, 0.1136, -1.4784, 0.525 ]])
For df2, the DataFrame with multiple dtypes, DataFrame.to_numpy() is relatively expensive.
In [18]: df2.to_numpy()
Out[18]:
array([[1.0, Timestamp('2013-01-02 00:00:00'), 1.0, 3, 'test', 'foo'],
[1.0, Timestamp('2013-01-02 00:00:00'), 1.0, 3, 'train', 'foo'],
[1.0, Timestamp('2013-01-02 00:00:00'), 1.0, 3, 'test', 'foo'],
[1.0, Timestamp('2013-01-02 00:00:00'), 1.0, 3, 'train', 'foo']],
dtype=object)
Note
DataFrame.to_numpy() does not include the index or column labels in the output.
describe() shows a quick statistic summary of your data:
In [19]: df.describe()
Out[19]:
A B C D
count 6.000000 6.000000 6.000000 6.000000
mean 0.073711 -0.431125 -0.687758 -0.233103
std 0.843157 0.922818 0.779887 0.973118
min -0.861849 -2.104569 -1.509059 -1.135632
25% -0.611510 -0.600794 -1.368714 -1.076610
50% 0.022070 -0.228039 -0.767252 -0.386188
75% 0.658444 0.041933 -0.034326 0.461706
max 1.212112 0.567020 0.276232 1.071804
Sorting by an axis:
In [21]: df.sort_index(axis=1, ascending=False)
Out[21]:
D C B A
2013-01-01 -1.135632 -1.509059 -0.282863 0.469112
2013-01-02 -1.044236 0.119209 -0.173215 1.212112
2013-01-03 1.071804 -0.494929 -2.104569 -0.861849
2013-01-04 0.271860 -1.039575 -0.706771 0.721555
2013-01-05 -1.087401 0.276232 0.567020 -0.424972
2013-01-06 0.524988 -1.478427 0.113648 -0.673690
Sorting by values:
In [22]: df.sort_values(by="B")
Out[22]:
A B C D
2013-01-03 -0.861849 -2.104569 -0.494929 1.071804
2013-01-04 0.721555 -0.706771 -1.039575 0.271860
2013-01-01 0.469112 -0.282863 -1.509059 -1.135632
2013-01-02 1.212112 -0.173215 0.119209 -1.044236
2013-01-06 -0.673690 0.113648 -1.478427 0.524988
2013-01-05 -0.424972 0.567020 0.276232 -1.087401
Selection
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Note
While standard Python / Numpy expressions for selecting and setting are intuitive and come in
handy for interactive work, for production code, we recommend the optimized pandas data
access methods, .at, .iat, .loc and .iloc.
See the indexing documentation Indexing and Selecting Data and MultiIndex / Advanced Indexing.
Getting
Selecting a single column, which yields a Series, equivalent to df.A:
In [23]: df["A"]
Out[23]:
2013-01-01 0.469112
2013-01-02 1.212112
2013-01-03 -0.861849
2013-01-04 0.721555
2013-01-05 -0.424972
2013-01-06 -0.673690
Freq: D, Name: A, dtype: float64
In [25]: df["20130102":"20130104"]
Out[25]:
A B C D
2013-01-02 1.212112 -0.173215 0.119209 -1.044236
2013-01-03 -0.861849 -2.104569 -0.494929 1.071804
2013-01-04 0.721555 -0.706771 -1.039575 0.271860
Selection by label
See more in Selection by Label.
For getting a cross section using a label:
In [26]: df.loc[dates[0]]
Out[26]:
A 0.469112
B -0.282863
C -1.509059
D -1.135632
Name: 2013-01-01 00:00:00, dtype: float64
Selection by position
See more in Selection by Position.
Select via the position of the passed integers:
In [32]: df.iloc[3]
Out[32]:
A 0.721555
B -0.706771
C -1.039575
D 0.271860
Name: 2013-01-04 00:00:00, dtype: float64
In [38]: df.iat[1, 1]
Out[38]: -0.17321464905330858
Boolean indexing
Using a single columnʼs values to select data.
In [39]: df[df["A"] > 0]
Out[39]:
A B C D
2013-01-01 0.469112 -0.282863 -1.509059 -1.135632
2013-01-02 1.212112 -0.173215 0.119209 -1.044236
2013-01-04 0.721555 -0.706771 -1.039575 0.271860
In [43]: df2
Out[43]:
A B C D E
2013-01-01 0.469112 -0.282863 -1.509059 -1.135632 one
2013-01-02 1.212112 -0.173215 0.119209 -1.044236 one
2013-01-03 -0.861849 -2.104569 -0.494929 1.071804 two
2013-01-04 0.721555 -0.706771 -1.039575 0.271860 three
Search the docs ... 2013-01-05 -0.424972 0.567020 0.276232 -1.087401
2013-01-06 -0.673690 0.113648 -1.478427 0.524988
four
three
Windowing Operations
Setting values by position:
Time series / date functionality
Time deltas In [49]: df.iat[0, 1] = 0
Styling
Options and settings Setting by assigning with a NumPy array:
Eh i f
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In [54]: df2
Out[54]:
A B C D F
2013-01-01 0.000000 0.000000 -1.509059 -5 NaN
2013-01-02 -1.212112 -0.173215 -0.119209 -5 -1.0
2013-01-03 -0.861849 -2.104569 -0.494929 -5 -2.0
2013-01-04 -0.721555 -0.706771 -1.039575 -5 -3.0
2013-01-05 -0.424972 -0.567020 -0.276232 -5 -4.0
2013-01-06 -0.673690 -0.113648 -1.478427 -5 -5.0
Missing data
pandas primarily uses the value np.nan to represent missing data. It is by default not included in
computations. See the Missing Data section.
Reindexing allows you to change/add/delete the index on a specified axis. This returns a copy of the
data.
In [55]: df1 = df.reindex(index=dates[0:4], columns=list(df.columns) + ["E"])
In [57]: df1
Out[57]:
A B C D F E
2013-01-01 0.000000 0.000000 -1.509059 5 NaN 1.0
2013-01-02 1.212112 -0.173215 0.119209 5 1.0 1.0
2013-01-03 -0.861849 -2.104569 -0.494929 5 2.0 NaN
2013-01-04 0.721555 -0.706771 -1.039575 5 3.0 NaN
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Operations
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Stats
Operations in general exclude missing data.
Performing a descriptive statistic:
In [61]: df.mean()
Out[61]:
A -0.004474
B -0.383981
C -0.687758
D 5.000000
F 3.000000
dtype: float64
Operating with objects that have different dimensionality and need alignment. In addition, pandas
automatically broadcasts along the specified dimension.
In [63]: s = pd.Series([1, 3, 5, np.nan, 6, 8], index=dates).shift(2)
In [64]: s
Out[64]:
2013-01-01 NaN
2013-01-02 NaN
2013-01-03 1.0
2013-01-04 3.0
2013-01-05 5.0
2013-01-06 NaN
Freq: D, dtype: float64
Apply
Applying functions to the data:
In [66]: df.apply(np.cumsum)
Out[66]:
A B C D F
2013-01-01 0.000000 0.000000 -1.509059 5 NaN
2013-01-02 1.212112 -0.173215 -1.389850 10 1.0
2013-01-03 0.350263 -2.277784 -1.884779 15 3.0
2013-01-04 1.071818 -2.984555 -2.924354 20 6.0
2013-01-05 0.646846 -2.417535 -2.648122 25 10.0
2013-01-06 -0.026844 -2.303886 -4.126549 30 15.0
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Histogramming
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In [69]: s
Out[69]:
0 4
1 2
2 1
3 2
4 6
5 4
6 4
7 6
8 4
9 4
dtype: int64
In [70]: s.value_counts()
Out[70]:
4 5
2 2
6 2
1 1
dtype: int64
String Methods
Series is equipped with a set of string processing methods in the str attribute that make it easy to
operate on each element of the array, as in the code snippet below. Note that pattern-matching in str
generally uses regular expressions by default (and in some cases always uses them). See more at
Vectorized String Methods.
In [71]: s = pd.Series(["A", "B", "C", "Aaba", "Baca", np.nan, "CABA", "dog", "cat"])
In [72]: s.str.lower()
Out[72]:
0 a
1 b
2 c
3 aaba
4 baca
5 NaN
6 caba
7 dog
8 cat
dtype: object
Merge
Concat
pandas provides various facilities for easily combining together Series and DataFrame objects with
various kinds of set logic for the indexes and relational algebra functionality in the case of join / merge-
type operations.
See the Merging section.
Concatenating pandas objects together with concat():
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In [74]: df
Out[74]:
0 1 2 3
0 -0.548702 1.467327 -1.015962 -0.483075
1 1.637550 -1.217659 -0.291519 -1.745505
2 -0.263952 0.991460 -0.919069 0.266046
3 -0.709661 1.669052 1.037882 -1.705775
4 -0.919854 -0.042379 1.247642 -0.009920
5 0.290213 0.495767 0.362949 1.548106
6 -1.131345 -0.089329 0.337863 -0.945867
7 -0.932132 1.956030 0.017587 -0.016692
8 -0.575247 0.254161 -1.143704 0.215897
9 1.193555 -0.077118 -0.408530 -0.862495
In [76]: pd.concat(pieces)
Out[76]:
0 1 2 3
0 -0.548702 1.467327 -1.015962 -0.483075
1 1.637550 -1.217659 -0.291519 -1.745505
2 -0.263952 0.991460 -0.919069 0.266046
3 -0.709661 1.669052 1.037882 -1.705775
4 -0.919854 -0.042379 1.247642 -0.009920
5 0.290213 0.495767 0.362949 1.548106
6 -1.131345 -0.089329 0.337863 -0.945867
7 -0.932132 1.956030 0.017587 -0.016692
8 -0.575247 0.254161 -1.143704 0.215897
9 1.193555 -0.077118 -0.408530 -0.862495
Note
Adding a column to a DataFrame is relatively fast. However, adding a row requires a copy, and
may be expensive. We recommend passing a pre-built list of records to the DataFrame
constructor instead of building a DataFrame by iteratively appending records to it. See
Appending to dataframe for more.
Join
SQL style merges. See the Database style joining section.
In [77]: left = pd.DataFrame({"key": ["foo", "foo"], "lval": [1, 2]})
In [79]: left
Out[79]:
key lval
0 foo 1
1 foo 2
In [80]: right
Out[80]:
key rval
0 foo 4
1 foo 5
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In [84]: left
Out[84]:
key lval
0 foo 1
1 bar 2
In [85]: right
Out[85]:
key rval
0 foo 4
1 bar 5
Grouping
By “group by” we are referring to a process involving one or more of the following steps:
Splitting the data into groups based on some criteria
Applying a function to each group independently
Combining the results into a data structure
See the Grouping section.
In [87]: df = pd.DataFrame(
....: {
....: "A": ["foo", "bar", "foo", "bar", "foo", "bar", "foo", "foo"],
....: "B": ["one", "one", "two", "three", "two", "two", "one", "three"],
....: "C": np.random.randn(8),
....: "D": np.random.randn(8),
....: }
....: )
....:
In [88]: df
Out[88]:
A B C D
0 foo one 1.346061 -1.577585
1 bar one 1.511763 0.396823
2 foo two 1.627081 -0.105381
3 bar three -0.990582 -0.532532
4 foo two -0.441652 1.453749
5 bar two 1.211526 1.208843
6 foo one 0.268520 -0.080952
7 foo three 0.024580 -0.264610
Grouping and then applying the sum() function to the resulting groups.
In [89]: df.groupby("A").sum()
Out[89]:
C D
A
bar 1.732707 1.073134
foo 2.824590 -0.574779
Grouping by multiple columns forms a hierarchical index, and again we can apply the sum() function.
In [90]: df.groupby(["A", "B"]).sum()
Out[90]:
C D
A B
bar one 1.511763 0.396823
three -0.990582 -0.532532
two 1.211526 1.208843
foo one 1.614581 -1.658537
three 0.024580 -0.264610
two 1.185429 1.348368
Reshaping
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Stack
In [91]: tuples = list(
....: zip(
....: *[
....: ["bar", "bar", "baz", "baz", "foo", "foo", "qux", "qux"],
....: ["one", "two", "one", "two", "one", "two", "one", "two"],
....: ]
....: )
....: )
....:
In [95]: df2
Out[95]:
A B
first second
bar one -0.727965 -0.589346
two 0.339969 -0.693205
baz one -0.339355 0.593616
two 0.884345 1.591431
In [97]: stacked
Out[97]:
first second
bar one A -0.727965
B -0.589346
two A 0.339969
B -0.693205
baz one A -0.339355
B 0.593616
two A 0.884345
B 1.591431
dtype: float64
With a “stacked” DataFrame or Series (having a MultiIndex as the index), the inverse operation of
stack() is unstack(), which by default unstacks the last level:
In [98]: stacked.unstack()
Out[98]:
A B
first second
bar one -0.727965 -0.589346
two 0.339969 -0.693205
baz one -0.339355 0.593616
two 0.884345 1.591431
In [99]: stacked.unstack(1)
Out[99]:
second one two
first
bar A -0.727965 0.339969
B -0.589346 -0.693205
baz A -0.339355 0.884345
B 0.593616 1.591431
In [100]: stacked.unstack(0)
Out[100]:
first bar baz
second
one A -0.727965 -0.339355
B -0.589346 0.593616
two A 0.339969 0.884345
B -0.693205 1.591431
Pivot tables
See the section on Pivot Tables.
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In [101]: df = pd.DataFrame(
.....: {
.....: "A": ["one", "one", "two", "three"] * 3,
.....: "B": ["A", "B", "C"] * 4,
.....: "C": ["foo", "foo", "foo", "bar", "bar", "bar"] * 2,
.....: "D": np.random.randn(12),
.....: "E": np.random.randn(12),
.....: }
.....: )
.....:
In [102]: df
Out[102]:
A B C D E
0 one A foo -1.202872 0.047609
1 one B foo -1.814470 -0.136473
2 two C foo 1.018601 -0.561757
3 three A bar -0.595447 -1.623033
4 one B bar 1.395433 0.029399
5 one C bar -0.392670 -0.542108
6 two A foo 0.007207 0.282696
7 three B foo 1.928123 -0.087302
8 one C foo -0.055224 -1.575170
9 one A bar 2.395985 1.771208
10 two B bar 1.552825 0.816482
11 three C bar 0.166599 1.100230
Time series
pandas has simple, powerful, and efficient functionality for performing resampling operations during
frequency conversion (e.g., converting secondly data into 5-minutely data). This is extremely common in,
but not limited to, financial applications. See the Time Series section.
In [104]: rng = pd.date_range("1/1/2012", periods=100, freq="S")
In [106]: ts.resample("5Min").sum()
Out[106]:
2012-01-01 24182
Freq: 5T, dtype: int64
In [109]: ts
Out[109]:
2012-03-06 1.857704
2012-03-07 -1.193545
2012-03-08 0.677510
2012-03-09 -0.153931
2012-03-10 0.520091
Freq: D, dtype: float64
In [111]: ts_utc
Out[111]:
2012-03-06 00:00:00+00:00 1.857704
2012-03-07 00:00:00+00:00 -1.193545
2012-03-08 00:00:00+00:00 0.677510
2012-03-09 00:00:00+00:00 -0.153931
2012-03-10 00:00:00+00:00 0.520091
Freq: D, dtype: float64
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In [115]: ts
Out[115]:
2012-01-31 -1.475051
2012-02-29 0.722570
2012-03-31 -0.322646
2012-04-30 -1.601631
2012-05-31 0.778033
Freq: M, dtype: float64
In [116]: ps = ts.to_period()
In [117]: ps
Out[117]:
2012-01 -1.475051
2012-02 0.722570
2012-03 -0.322646
2012-04 -1.601631
2012-05 0.778033
Freq: M, dtype: float64
In [118]: ps.to_timestamp()
Out[118]:
2012-01-01 -1.475051
2012-02-01 0.722570
2012-03-01 -0.322646
2012-04-01 -1.601631
2012-05-01 0.778033
Freq: MS, dtype: float64
Converting between period and timestamp enables some convenient arithmetic functions to be used. In
the following example, we convert a quarterly frequency with year ending in November to 9am of the end
of the month following the quarter end:
In [119]: prng = pd.period_range("1990Q1", "2000Q4", freq="Q-NOV")
In [122]: ts.head()
Out[122]:
1990-03-01 09:00 -0.289342
1990-06-01 09:00 0.233141
1990-09-01 09:00 -0.223540
1990-12-01 09:00 0.542054
1991-03-01 09:00 -0.688585
Freq: H, dtype: float64
Categoricals
pandas can include categorical data in a DataFrame. For full docs, see the categorical introduction and
the API documentation.
In [123]: df = pd.DataFrame(
.....: {"id": [1, 2, 3, 4, 5, 6], "raw_grade": ["a", "b", "b", "a", "a", "e"]}
.....: )
.....:
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In [125]: df["grade"]
Out[125]:
0 a
1 b
2 b
3 a
4 a
5 e
Name: grade, dtype: category
Categories (3, object): ['a', 'b', 'e']
Reorder the categories and simultaneously add the missing categories (methods under Series.cat()
return a new Series by default).
In [127]: df["grade"] = df["grade"].cat.set_categories(
.....: ["very bad", "bad", "medium", "good", "very good"]
.....: )
.....:
In [128]: df["grade"]
Out[128]:
0 very good
1 good
2 good
3 very good
4 very good
5 very bad
Name: grade, dtype: category
Categories (5, object): ['very bad', 'bad', 'medium', 'good', 'very good']
Plotting
See the Plotting docs.
We use the standard convention for referencing the matplotlib API:
In [131]: import matplotlib.pyplot as plt
In [132]: plt.close("all")
In [134]: ts = ts.cumsum()
In [135]: ts.plot()
Out[135]: <AxesSubplot:>
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On a DataFrame, the plot() method is a convenience to plot all of the columns with labels:
In [136]: df = pd.DataFrame(
.....: np.random.randn(1000, 4), index=ts.index, columns=["A", "B", "C", "D"]
.....: )
.....:
In [137]: df = df.cumsum()
In [138]: plt.figure()
Out[138]: <Figure size 640x480 with 0 Axes>
In [139]: df.plot()
Out[139]: <AxesSubplot:>
In [140]: plt.legend(loc='best')
Out[140]: <matplotlib.legend.Legend at 0x7fc1db57b6d0>
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In [141]: df.to_csv("foo.csv")
HDF5
Reading and writing to HDFStores.
Writing to a HDF5 Store.
In [143]: df.to_hdf("foo.h5", "df")
Excel
Reading and writing to MS Excel.
Writing to an excel file.
In [145]: df.to_excel("foo.xlsx", sheet_name="Sheet1")
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Gotchas
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If you are attempting to perform an operation you might see an exception like:
>>> if pd.Series([False, True, False]):
... print("I was true")
Traceback
...
ValueError: The truth value of an array is ambiguous. Use a.empty, a.any() or a.all().
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