FC 203B Fraction Collector Users Guide
FC 203B Fraction Collector Users Guide
Fraction Collector
User’s Guide
Declaration of Conformity
1 Introduction
Unpacking ............................................................................. 1-2
Customer Service ................................................................. 1-3
Technical Specifications ..................................................... 1-4
2 Installation
Plumbing Setup .................................................................... 2-1
Hardware ....................................................................... 2-2
3-Way Valve Installation ............................................. 2-4
Tubing ............................................................................. 2-7
Electrical Setup ..................................................................... 2-9
Rear Panel Description ................................................ 2-9
Input/Output (I/O) Port ............................................. 2-10
Wiring to Other Equipment ........................................ 2-13
Power Connection ........................................................ 2-21
3 Operation
Front Panel ............................................................................ 3-2
Command Hard Keys .................................................. 3-2
Numeric Hard Keys ...................................................... 3-2
Soft Keys ......................................................................... 3-2
Help Key ......................................................................... 3-3
Start Up ................................................................................. 3-4
Collection Options ............................................................... 3-5
Entering Numbers ......................................................... 3-5
Review or Change Options ......................................... 3-5
Review or Change Racks ............................................. 3-6
Collection Into Same or
New Tubes for Each Cycle .......................................... 3-6
Choosing Collection Modes ......................................... 3-7
Building Collection Windows ..................................... 3-7
Ready to Start ................................................................ 3-7
During the Run .................................................................... 3-9
Manual Override ........................................................... 3-9
Power Failure ................................................................. 3-9
Cycle Collection ................................................................... 3-10
Collect into Same Set Tubes ........................................ 3-11
Collect into New Set Tubes ......................................... 3-11
Ready-to-Run Display .................................................. 3-12
Collection Modes ................................................................. 3-13
Choosing Time Collection Mode ................................ 3-14
Choosing Drop Collection Mode ................................ 3-16
Choosing Peak + Time Collection Mode ................... 3-18
Choosing Peak + Drop Collection Mode .................. 3-24
Choosing Manual Collection Mode ........................... 3-30
Collection Windows ............................................................ 3-33
Building No Windows .................................................. 3-36
Building One Window ................................................. 3-36
Building More Than One Window ............................ 3-37
Deleting Windows ........................................................ 3-39
Nonsense Windows ...................................................... 3-39
4 Maintenance
Cold-Room Use .................................................................... 4-2
Chemical Compatibility ...................................................... 4-3
Transporting the Fraction Collector ................................. 4-4
Replacing a Fuse .................................................................. 4-5
5 Troubleshooting
Troubleshooting ................................................................... 5-2
Repair and Return Policies ................................................ 5-7
Appendix A Racks
Thermostated Racks ............................................................ A-9
89/336/EEC, 73/23/EEC
Welcome to improved fraction collecting. The Gilson FC 203B Fraction Collector is simple
to use and straightforward to learn. Its sophisticated design makes it flexible enough to
adapt to your collection goals. The fraction collector is designed to make every operation
clear and efficient.
You can get information about the fraction collector from these sources:
• The HELP key on the 203B’s keypad offers specific, on-line instructions during setup
and operation.
• The 203B Quick Reference Guide answers key points quickly. Two copies are included.
• Gilson’s customer service team is available to answer your questions. Refer to page 1-3
for contact information.
Note: If you’re controlling the FC 203B Fraction Collector via Gilson UniPoint™ System
Software, you can obtain the following technical notes from your Gilson representative:
Fraction Collector Control (part number LT21373) and Large-Volume Preparative System
Control Using a 30x Pump for Repetitive Injection (part number LT21375).
1-1
Introduction 1
Unpacking
Unpacking
Unpack the fraction collector and accessories
carefully from the carton. Cross-check the contents
against the standard equipment checklist shown
below and against your purchase order’s optional
accessory list to verify that all parts are included
and undamaged.
1-2
Introduction 1
Customer Service
Customer Service
Gilson, Inc. and its worldwide network of
authorized representatives provide customers with
four basic types of assistance: sales, technical,
applications, and instrument repair.
1-3
Introduction 1
Technical Specifications
Technical Specifications
1-4
Technical Specifications
1-5
1
Introduction
Technical Specifications
1-6
Introduction
1
Installation 2
Plumbing Setup
Throughout the plumbing setup, refer to the diagram below.
2-1
Installation 2
Plumbing Setup
Hardware
Pan
Rack holder
Rack
2-2
Installation 2
Plumbing Setup
The Code 15 microplate holder attaches with
thumbscrews to the back face of the fraction collector.
If you are using a standard microplate, attach the
Code 15 plate holder in the upper position. If you are
using a deep-well microplate, attach the Code 15
plate holder in the lower position.
Code 1, 20, 21, 23, 23W, 24, 28, 29, 29 LE, and 29
SE racks fit directly in the pan.
2-3
Installation 2
Plumbing Setup
2-4
Installation 2
Plumbing Setup
Outlet connection
Assembly
2-5
Installation 2
Plumbing Setup
Electrical connection
Note that the plug from the valve has two small
tabs on one side. Insert the plug into the socket
with the two tabs facing toward the left.
Plumbing Setup
Tubing
Inlet tubing
Omnifit™-type Fitting
2-7
Installation 2
Plumbing Setup
Detector connection
2-8
Installation 2
Electrical Setup
Electrical Setup
Rear Panel Description
Connections on the FC 203B Fraction Collector’s rear
panel include:
2-9
Installation 2
Electrical Setup
2-10
Installation 2
Electrical Setup
The diagram below shows the location of the
multipurpose I/O contacts. Make the I/O
connections to the terminal block connector that
attaches directly to the fraction collector. You will
find detailed installation instructions in the next
section.
• small-blade screwdriver
2-11
Installation 2
Electrical Setup
Making connections
2-12
Installation 2
Electrical Setup
Wiring to Other Equipment
Detector input
2-13
Installation 2
Electrical Setup
2-14
Installation 2
Electrical Setup
Remote start/advance and remote end inputs
2-15
Installation 2
Electrical Setup
Note: The 305 does not accept the input from the
fraction collector event mark output. Therefore,
connect the fraction collector event mark output to
a chart recorder, integrator, or detector.
Electrical Setup
Event mark output at peak start
Programmable output
2-17
Installation 2
Electrical Setup
2-18
Installation 2
Electrical Setup
Then specify which one of the seven options to use.
Access the Technical menu by pressing EDIT then
2. You’ll see:
GSIOC unit ID =
Next Quit
Examples:
2-19
Installation 2
Electrical Setup
GSIOC interface
2-20
Installation 2
Electrical Setup
Power Connection
After you’ve made all the necessary connections,
you’re ready to attach the power cord and turn the
power on.
2-21
Operation 3
The FC 203B Fraction Collector has a built-in front panel that you’ll use to set collection
mode and operating parameters. The 2-line display guides you through mode and
parameter selection using a menu format. The keys provide full operating control.
3-1
Operation 3
Front Panel
Front Panel
You give instructions to the fraction collector with
three kinds of keys: command hard keys, numeric
hard keys, and soft keys. You get information about
the 203B software with the HELP key.
Soft Keys
The four soft keys are located below the display.
Their functions vary as you perform different
operations.
3-2
Operation 3
Front Panel
Help Key
The most useful hard key may be the HELP key. It’s
always available, to give you specific help and
instructions every step of the way.
3-3
Operation 3
Start Up
Start Up
When all plumbing and electrical connections have
been made, turn on the fraction collector. The arm
and dispense head will start moving and the
display will read:
3-4
Operation 3
Collection Options
Collection Options
Entering Numbers
Numbers enter at the far right of the display and
move to the left with each succeeding entry. The
decimal point, where applicable, doesn’t have to be
entered.
0.06
0.68
68.00
3-5
Operation 3
Collection Options
3-6
Operation 3
Collection Options
Choosing Collection Modes
To choose a collection mode, press the EDIT key.
You’ll see:
Ready to Start
Note: A change in the value of any parameter in
any mode is immediately updated in every mode!
___ mode
List Rack __Start
3-7
Operation 3
Collection Options
If you press the END key during the run, the run
terminates and the cycle number is incremented by 1.
3-8
Operation 3
Power Failure
In the case of a power failure during a run, the
203B will return to “home” and the display will
flash:
This warns you that all effluent may not have been
collected.
3-9
Operation 3
Cycle Collection
Cycle Collection
The fraction collector enables you to collect
fractions two different ways:
3-10
Operation 3
Cycle Collection
Collect into Same Set Tubes
To collect each sample into the same set of tubes,
set the Tubes per cycle parameter to 0.
Cycle Tubes
1 1–80
2 1–80
3 1–80
4 1–80
etc. etc.
Cycle Tubes
1 1–20
2 21–40
3 41–60
4 61–80
3-11
Operation 3
Cycle Collection
Cycle Tubes
1 1–25
2 26–50
3 51–75
Ready-to-Run Display
When you set the tubes per cycle option, the Start
soft key changes to a Cycle x soft key on the ready-
to-run display. The x identifies which cycle will be
started. To increment the cycle number, press the
Cycle x soft key. By pressing the Cycle x soft key
again after the maximum cycle number, Cycle 1 can
be redisplayed.
To start the run, press the START key at the left of the
display. When the run finishes, the cycle number is
incremented by 1. If the maximum cycle number was
just completed, then the cycle number is reset to 1.
If you press the END key during the run, the run
terminates and the cycle number is incremented by 1.
If you try to set the tubes per cycle option when the
multiple collection head option is active, the 203B
prompts you to change the Multiple collect heads
parameter to single.
3-12
Operation 3
Collection Modes
Collection Modes
The fraction collector can collect fractions in several
ways.
Time mode
Drop mode
Peak modes
Manual mode
3-13
Operation 3
Collection Modes
Mode selection
Press Time.
Press Ok.
or
Collection Modes
Ready-to-run display
To start the run, press the START key at the left of the
display. When the run finishes, the cycle number is
incremented by 1. If the maximum cycle number was
just completed, then the cycle number is reset to 1.
If you press the END key during the run, the run
terminates and the cycle number is incremented by 1.
3-15
Operation 3
Collection Modes
Mode selection
Press Drop.
Press Ok.
or
Collection Modes
Ready-to-run display
To start the run, press the START key at the left of the
display. When the run finishes, the cycle number is
incremented by 1. If the maximum cycle number was
just completed, then the cycle number is reset to 1.
If you press the END key during the run, the run
terminates and the cycle number is incremented by 1.
3-17
Operation 3
Collection Modes
Mode selection
Press Peak.
Fractionation selection
You’ll see:
Press Ok.
3-18
Operation 3
Collection Modes
Non-peak collection option
Nonpeak: __ min/tube
Ok Discard
(To collect non-peak fractions)
or
3-19
Operation 3
Collection Modes
Peak height: __ mV
Ok
Peak level: __ mV
Ok
3-20
Operation 3
Collection Modes
If you have a relatively stable baseline, set the
level value at about 2 times the expected baseline
fluctuation. For example, if the baseline stays
between 0 and 1 mV, set the level at 2 mV.
Delay time
You’ll see:
3-21
Operation 3
Collection Modes
or
Ready-to-run display
3-22
Operation 3
Collection Modes
Note: The 203B has been preset to detect positive
peaks. If your application requires detection of both
positive and negative peaks, you may select that
option via the Technical menu. See Appendix C for
information.
To start the run, press the START key at the left of the
display. When the run finishes, the cycle number is
incremented by 1. If the maximum cycle number was
just completed, then the cycle number is reset to 1.
If you press the END key during the run, the run
terminates and the cycle number is incremented by 1.
3-23
Operation 3
Collection Modes
Mode selection
Press Peak.
Fractionation selection
You’ll see:
Press Ok.
3-24
Operation 3
Collection Modes
Non-peak collection option
Nonpeak: __ drop/tube
Ok Discard
(To collect non-peak fractions)
or
3-25
Operation 3
Collection Modes
Peak height: __ mV
Ok
Peak level: __ mV
Ok
3-26
Operation 3
Collection Modes
If you have a relatively stable baseline, set the
level value at about 2 times the expected baseline
fluctuation. For example, if the baseline stays
between 0 and 1 mV, set the level at 2 mV.
Delay time
You’ll see:
3-27
Operation 3
Collection Modes
or
Ready-to-run display
3-28
Operation 3
Collection Modes
Note: The 203B has been preset to detect positive
peaks. If your application requires detection of both
positive and negative peaks, you may select that
option via the Technical menu. See Appendix C for
information.
To start the run, press the START key at the left of the
display. When the run finishes, the cycle number is
incremented by 1. If the maximum cycle number was
just completed, then the cycle number is reset to 1.
If you press the END key during the run, the run
terminates and the cycle number is incremented by 1.
3-29
Operation 3
Collection Modes
Mode selection
Press Manl.
Press Ok.
3-30
Operation 3
Collection Modes
Collection window option
or
Ready-to-run display
Manual mode
List Rack __ Start
3-31
Operation 3
Collection Modes
3-32
Operation 3
Collection Windows
Collection Windows
Gilson strongly recommends using a 3-way valve
when operating the fraction collector in this
collection mode. Refer to Section 2 for instructions
on installing a 3-way valve.
3-33
Operation 3
Collection Windows
Examples
windows
drain for 3 minutes
3-34
Operation 3
Collection Windows
Example 4. Two windows
windows
drain for 3 minutes
3-35
Operation 3
Collection Windows
Building No Windows
Collection Windows
The End of a run is represented by 999.9 min.
Using this display, set the start time for the first
collection window. Press 5, then 0 (Remember the
fixed decimal point!). Then press Ok. You’ll see:
3-37
Operation 3
Collection Windows
Using this display, set the end time for the first
collection window. Press 1, 0, 0. Then press Ok.
You’ll see:
Press Ok.
Collection Windows
Deleting Windows
If you don’t want a window that is displayed, press
Del.
Nonsense Windows
The fraction collector won’t let you build the two
types of nonsense windows described below.
Overlapped time
• press Quit
• press Ok until the Collect 20.0 to End window
appears
• press Del to delete that window
• press Add and build the 25 to 30 minute
window
Backward time
3-39
Maintenance 4
The fraction collector is designed for reliable, long term use in normal laboratory and cold-
room environments. Simple care and maintenance will ensure proper operation for many
years.
4-1
Maintenance 4
Cold-Room Use
Cold-Room Use
You can leave the fraction collector in a cold-room,
provided that the power is left on continuously.
Leaving the power on provides enough internal heat
to prevent condensation from forming on critical
components.
4-2
Maintenance 4
Chemical Compatibility
Chemical Compatibility
The case and keypad of the fraction collector are
resistant to most solvents and buffers used in the
lab. Follow good laboratory technique by cleaning
spills with either water or alcohol.
4-3
Maintenance 4
Transporting the Fraction Collector
4-4
Maintenance 4
Replacing a Fuse
Replacing a Fuse
To change a fuse, follow these steps.
You must use “T” type fuses. The fuses that you
install depend on the voltage of your unit.
4-5
Troubleshooting 5
If you encounter a problem while operating the FC 203B Fraction Collector, refer to the
following pages. If you cannot solve or isolate the problem, contact the Gilson Customer
Service Department or your local Gilson representative. See Before calling us on page 5-7.
5-1
Troubleshooting 5
Troubleshooting
Troubleshooting
Machine makes loud noise
5-2
Troubleshooting 5
Troubleshooting
Drop detector not counting drops, or
unreliable counting
5-3
Troubleshooting 5
Troubleshooting
5-4
Troubleshooting 5
Troubleshooting
3-way valve not functioning or functioning
incorrectly
5-5
Troubleshooting 5
Troubleshooting
5-6
Troubleshooting 5
Warranty repair
Non-warranty repair
Rebuilt exchange
5-7
Troubleshooting 5
Repair and Return Policies
Return procedure
Gilson, Inc.
Attention: Customer Service
(indicate the authorization here)
3000 W. Beltline Highway
Middleton, WI 53562
5-8
Racks A
The FC 203B Fraction Collector accommodates many racks, all described in this appendix.
Each rack has its own code number, and most of the racks have their code numbers
imprinted on them.
The fraction collector always needs to know the code number for the rack you’re using so
it can accurately track the vessel positions for that rack. The diagram below shows the
collection pattern used for almost all FC 203B racks. The only exceptions are:
• Code 29 LE and 29 SE racks when used with capped Eppendorf vials (see pages A-7
and A-8)
Three racks (Code 30, 32, and 33) can maintain your fractions at a constant temperature.
Tubes are placed in an aluminum block that is surrounded by a flowing water bath. To
use these thermostated racks, you’ll have to order:
• special rack holder for thermostated racks (part number 2704471). You will not need
this rack holder when you use a Code 32 rack with 100 mm tubes.
Collection Pattern
A-1
Appendix A
Racks
Collection plate
Code 0 rack
For 80 vessels
Material: polypropylene
Vessels and capacity: 12 x 32 mm vials (2 mL)
Part number: 270430
Code 1 rack
For 80 vessels
Material: polypropylene
Vessels and capacity: 13 x 65 mm tubes (7 mL)
13 x 100 mm tubes (9 mL)
Part number: 12240101, package of 6
Code 2 rack
A-2
Appendix A
Racks
Installation instructions for Code 4, Code 11
and Code 14 racks
A-3
Appendix A
Racks
Code 4 rack
For 80 vessels
Material: stainless steel
Vessels and capacity: 12 x 75 mm tubes (5 mL)
Part number: 130412
Installation: see page A-3
Code 11 rack
Code 14 rack
A-4
Appendix A
Racks
Code 15 rack holder
A-5
Appendix A
Racks
Code 20 rack
Code 21 rack
For 60 vessels
Material: polypropylene
Vessels and capacity: 13 x 100 mm tubes (9 mL)
Part number: 150422
Code 23 rack
For 44 vessels
Material: polypropylene
Vessels and capacity: 17 x 55 mm vials (6.8 mL)
17 x 65 mm vials (8 mL)
Part number: 150426
For 44 vessels
Material: polypropylene and stainless steel
Vessels and capacity: Waters WISP vials (4 mL)
Part number: 270433
Note: When setting parameters in the software,
indicate rack code “23”.
A-6
Appendix A
Racks
Code 24 rack
For 14 vessels
Material: polypropylene
Vessels and capacity: 28 x 60 mm (20 mL)
scintillation vials
Part number: 150427
Code 28 rack
Code 29 rack
For 60 vessels
Material: polypropylene
Vessels and capacity: 12 x 65 mm tubes (3.5 mL)
12 x 75 mm tubes (5 mL)
Part number: 150429
Code 29 LE rack
A-7
Appendix A
Racks
Code 29 SE rack
Place the vials in the center two rows with the caps
facing outward. When setting parameters in the
software, indicate rack code “19”.
A-8
Appendix A
Racks
Thermostated Racks
To use the thermostated racks described below,
you’ll have to order:
Code 30 rack
Code 32 rack
Code 33 rack
A-9
Parameter Review Menu B
When you store parameters within any fraction collection mode, those parameters are
active in every mode. For example, a collection window established in drop mode is also
active in time mode.
If your fraction collector has several users, you must take care to review all parameters
before beginning a run.
B-1
Appendix B
Parameter Review Menu
Peak height: __ mV
Ok
or
Peak level: __ mV
Ok
B-2
Appendix B
B-3
Technical Menu C
Access the Technical menu by pressing EDIT, then 2. Following is an explanation of each
parameter in this menu.
C-1
Appendix C
Technical Menu
GSIOC unit ID = 6
Next Quit
C-2
Appendix C
Technical Menu
Out 2 on [1 of seven choices]
Next No Quit
C-3
Appendix C
Technical Menu
C-4
Service Menu D
Access the Service menu by pressing EDIT, then 3. For an explanation of a parameter in
this menu, press the HELP key when the parameter is on the display.
D-1
Appendix D
Service Menu
A/D slope: __
Next Quit
Detector A/D: µV
Next Zero Quit
Serial port = __ h
Next Quit
D-2
Dispense Head End-Fitting
Installation E
With time and use, the tip of the inlet tubing and the end fitting may become worn or
damaged.
To ensure regular drop formation, you may have to reposition or replace the Omnifit™-type
fitting or recut the end of the tubing.
E-1
Appendix E
Dispense Head End-Fitting Installation
Replacement
To replace the end fitting, use the following
instructions:
E-2
Appendix E
E-3
GSIOC Interface F
It incorporates an EIA RS-485 interface and allows 32 slave devices to be controlled from
a single master in a multi-drop configuration.
A device is identified by a unique number which must be known to the device and to the
software. The default ID code of the FC 203B Fraction Collector is 6. You can set it to any
number from 0 to 63, but remember to use the same value in the software when issuing
commands to the fraction collector. Also make sure that no other unit in the system has
the same ID number.
Note: For more information on the GSIOC interface and GSIOC commands, refer to the
Technical Manual for the FC 203B Fraction Collector.
To control the fraction collector via the GSIOC interface, you will need the following
equipment:
• A computer
• Gilson 506C System Interface or 605 RS-232 Adapter
• Gilson 712 HPLC Control Software, UniPoint™ System Software, or 706 Device
Driver Software and your program
F-1
Appendix F
GSIOC Interface
GSIOC Commands
There are two kinds of commands that you can
issue from your master unit to the fraction
collector.
F-2
Appendix F
GSIOC Interface
Immediate Commands
Command Description
* Reads the contact status of the fraction collector inputs. Returns “abcd”
where:
a = C if output 1 is closed
D if output 1 is open
b = C if output 2 is closed
D if output 2 is open
tttttt = the time (in 10 ms units) since the last buffered 9 command or
000000 if the queue is empty
F-3
Appendix F
GSIOC Interface
R Reads both lines of the display. Returns “<line number 1> <line number 2> a”
where:
a = + if drain is on
- if drain is off
r Reads the top line of the display. Returns “<line number 1>” where:
Resolution is 1 microvolt.
a = M if moving
S if stationary
a = M if moving
S if stationary
F-4
Appendix F
GSIOC Interface
Buffered Commands
Command Description
C1 closes output 1
C2 closes output 2
C12 closes both outputs
D1 opens output 1
D2 opens output 2
D12 opens both outputs
Gddd Causes the fraction collector to beep for a specified period of time:
ddd specifies beep duration (0 to 100); units are 0.1 seconds (for example,
100 = 10 seconds).
K<string> Simulates front panel key strokes via GSIOC. You can enter up to a 40-
character string. Keystrokes are simulated according to the key assignments
shown below. For example, if you wanted to start a run, you would issue
the command KS.
F-5
Appendix F
GSIOC Interface
Mx relaxes X motor.
My relaxes Y motor.
Mxy relaxes both motors.
Warning: After you use this command, reset the fraction collector using the
immediate $ command before you issue a command that moves the head to
a new position.
Txxx Moves head to the specified tube. The xxx parameter indicates the number
of the tube.
Xxxxx Sets the X-axis position indicated by xxxx. Units are 0.1 mm towards the
right.
Yxxxx Sets the Y-axis position indicated by xxxx. Units are 0.1 mm towards the
front.
0xxxx Sets FIFO 0 sampling rate and clears FIFO. The parameter xxxx is the
sampling rate in units of 0.01 Hz.
9 Clears the contact closure event FIFO and resets the contact event timer.
F-6
Multiple Column Option G
The FC 203B Fraction Collector’s multiple column option allows you to collect effluent
from several columns at the same time.
You can use the multiple column option with any Gilson rack, in any operating mode. To
easily synchronize collection from several columns, Gilson recommends that you
choose Time mode as the operating mode.
Before you use this option, use the following instructions to:
G-1
Appendix G
Multiple Column Option
Set-up
Prepare as many separation columns as you will
need. Attach the column outlet tubings to the
columns.
or
G-2
Appendix G
G-3
Appendix G
Multiple Column Option
G-4
Appendix G
G-5
Appendix G
Multiple Column Option
G-6
Peak Detection Using
Slope or Millivolt Level H
In the Technical menu (EDIT 2), you indicate if the fraction collector should collect peaks
using slope or millivolt level. (Collection by slope is the default.) This appendix describes
the peak detection algorithm that the fraction collector uses to collect peaks if the slope
option is selected. It also looks at what peaks are collected if you choose the level option.
H-1
Appendix H
Peak Detection Using Slope or Millivolt Level
H-2
Appendix H
H-3
Appendix H
Peak Detection Using Slope or Millivolt Level
Peak Phases
A positive peak is composed of three phases (refer
to diagram below):
• a rising slope
• an apex
• a falling slope
H-4
Appendix H
Maximum width = k 5S 0
Special Cases
If you desire, you can collect negative peaks. The
three negative-peak phases are falling front, bottom,
rising end. In general, when the fraction collector is
set to look for negative peaks, it is less able to
accurately interpret difficult chromatograms. The
default setting is for collection of positive peaks only.
To change that setting, see Appendix C.
H-5
Appendix H
Peak Detection Using Slope or Millivolt Level
H-6
Appendix H
time (minutes)
time (minutes)
H-7
Appendix H
Peak Detection Using Slope or Millivolt Level
time (minutes)
H-8
Autopreparative Collection Controlled
by 712 HPLC Control Software I
To coordinate system components, you’ll use Gilson 712 HPLC Control Software or
UniPoint™ System Software. Within the software, you’ll set parameters that control the
devices via the Gilson Serial Input/Output Channel (GSIOC) or by sending contact
signals.
This appendix describes how to set up system components for the autopreparative
collection of fractions using the 712 HPLC Control Software. You’ll find information on
making rear panel connections, setting parameters on the fraction collector, and setting
parameters in the 712 HPLC Control Software. In the examples, the injection pump has a
10 SC head, and the injection volume is 5 mL at a flow rate of 5 mL/min. Also four
samples will be injected and eight fractions will be collected from each sample.
I-1
Appendix I
Autopreparative Collection Controlled by 712 HPLC Control Software
GSIOC Connections
To control the pumps and send GSIOC commands
to other system components, use GSIOC cables to
connect system components to the 506C System
Interface. Then connect the RS-232 cable to the
serial ports of the 506C and the computer.
Contact Connections
Use 2-conductor cable to make contact connections
between the fraction collector and the 506C.
I-2
Appendix I
I-3
Autopreparative Collection Controlled by 712 HPLC Control Software
I-4
Appendix
Example 1
Collection of Each Cycle Into Same
Set of Tubes
When setting collection parameters on the fraction
collector, you can indicate that you want to collect
each cycle into the same set of tubes.
Cycle Tubes
1 1–80
2 1–80
3 1–80
4 1–80
etc. etc.
I-5
Appendix I
Autopreparative Collection Controlled by 712 HPLC Control Software
Press Ok.
I-6
Appendix I
Press Ok.
Collect: __to __
Ok Add Del
I-7
Appendix I
Autopreparative Collection Controlled by 712 HPLC Control Software
Example 2
Collection of Each Cycle Into a
Different Set of Tubes
When setting collection parameters, you can tell the
fraction collector to collect each cycle into a
different set of tubes.
You’ll see:
Press Ok.
I-8
Appendix I
Cycle Tubes
1 1–20
2 21–40
3 41–60
4 61–80
Press Time.
I-9
Appendix I
Autopreparative Collection Controlled by 712 HPLC Control Software
Press Ok.
Collect: __ to __
Ok Add Del
I-10
Appendix I
Configuration
Do not include the injection pump in the Hardware
Configuration box (Edit menu/Hardware Config.
command). The pump information in that box is
for mobile phase delivery pumps only because the
software limits flow to the maximum flow rate of
the smallest pump head size specified. Typically,
the pumps in the system are arranged as shown
below.
Number of Loops
The number of Loop Passes set in the Run
Conditions box (Edit menu/Run Conditions
command) indicates the number of samples to be
injected. This number is the same as the number of
fraction collector cycles.
I-11
Appendix I
Autopreparative Collection Controlled by 712 HPLC Control Software
Mobile Phase
When setting up the method, indicate a schedule of
timed flow events using the Mobile Phase box (Edit
menu/Mobile Phase command). That schedule
identifies the flow rate and percent composition
that each elution pump contributes to the flow at
various time points during the run. At the time of
injection, set the flow rate from the elution pumps
at 0.00 mL/min.
At 4.99 min. into the run, the flow rate is 30.0 mL/
min. with 5% coming from Pump B and 95% coming
from Pump A. %A is calculated as 100% – %B.
I-12
Appendix I
GSIOC Events
In the GSIOC Event Table (Edit menu/GSIOC
Events command), set up events to:
I-13
Appendix I
Autopreparative Collection Controlled by 712 HPLC Control Software
I-14
Appendix I
I-15
Appendix I
Autopreparative Collection Controlled by 712 HPLC Control Software
Method Listing
Refer to the following method listing when setting parameters for an autopreparative
run.
-Control Parameters-
Run Time: 30.00 min
Loop Passes: 4
1.00 min Loop Begin
30.00 min Loop End
Link Method : STOP
-Contact Events-
6.00 min Pulse 1 Start frac. coll.
-GSIOC Events-
0.01 min Buf_Cmd to unit 4: L 'Lock injection pump front panel
0.10 min Buf_Cmd to unit 6: SR 'Set frac. collector to remote mode
5.00 min Buf_Cmd to unit 4: DE50043B1 'Set dispense speed and volume
5.50 min Imm_Cmd to unit 4: P 'Read cycle#; if NB=0, stop injection
6.02 min Imm_Cmd to unit 6: T>1 'Read tube number into report
-Analysis Parameters-
Integration Start: 5.51 min
Integration Time: 24.49 min
Peak Width: 0.20 min
Peak Sensitivity: 2.0 %
Analysis Channel: A
Save the data
mV Full Scale: 10
% Offset: 10
Chart speed is 10 mm/min
Do not print the strip chart
I-16
Appendix I
-Scaled Plot-
Do not print scaled plot
Plot Analysis Channel (A)
-Rubber Stamp-
none
-Analysis Events-
none
-Method Setup-
Number of Pumps: 2
Contact Unit ID: 63
Data Unit ID: 63
I-17
Autopreparative Collection
Controlled by 305 Pump J
To coordinate system components, you’ll use a Gilson 305 Pump. Using the 305’s
software, you’ll set mobile phase composition, identify injection pump parameters, and
coordinate fraction collection on the 203B.
This appendix describes how to set up system components for the autopreparative
collection of fractions. You’ll find information on making rear panel connections, setting
parameters on the fraction collector, and setting parameters on the 305.
J-1
Appendix J
Autopreparative Collection Controlled by 305 Pump
GSIOC Connections
To control the injection pump, use a GSIOC cable
to connect the controlling 305, elution pump(s),
and injection pump. If necessary, refer to the 305
User’s Guide for more information on making
GSIOC connections.
Contact Connections
Use 2-conductor cable to make contact connections.
J-2
Appendix J
J-3
Appendix J
Autopreparative Collection Controlled by 305 Pump
J-4
Appendix J
Example 1
Collection of Each Cycle Into Same
Set of Tubes
When setting collection parameters on the fraction
collector, you can indicate that you want to collect
each cycle into the same set of tubes.
Cycle Tubes
1 1–80
2 1–80
3 1–80
4 1–80
etc. etc.
J-5
Appendix J
Autopreparative Collection Controlled by 305 Pump
Press Ok.
J-6
Appendix J
Press Ok.
Collect: __to __
Ok Add Del
J-7
Appendix J
Autopreparative Collection Controlled by 305 Pump
Example 2
Collection of Each Cycle Into a
Different Set of Tubes
When setting collection parameters, you can tell the
fraction collector to collect each cycle into a
different set of tubes.
You’ll see:
Press Ok.
J-8
Appendix J
Cycle Tubes
1 1–20
2 21–40
3 41–60
4 61–80
J-9
Appendix J
Autopreparative Collection Controlled by 305 Pump
Press Time.
Press Ok.
Collect: __ to __
Ok Add Del
J-10
Appendix J
J-11
Appendix J
Autopreparative Collection Controlled by 305 Pump
Set Up Contact
In the I/O menu, set Output #1 to the open state.
MIXT: Time %B
0 5
30 5
Program Sheet
Refer to the attached programming sheet when
setting up parameters for the run.
J-12
Autopreparative Collection Controlled by 305 Pump
J-13
J
Appendix
Collecting Sharp Narrow Peaks K
With the FC 203B Fraction Collector, peak detection is optimized for LC applications that
collect peaks with a width at half height of 1 minute or longer. For HPLC applications
that collect varying sizes of sharp narrow peaks, you may need to:
• connect the DET input of the fraction collector to the 10 mV full scale output of the
detector, if the fraction collector is connected to the 100 mV full scale output.
• adjust the peak width and peak height values set in the fraction collector’s software.
Peaks with widths of approximately 0.4 minutes or less may require peak width and
height settings that are two to five times greater than the average peak width and
actual peak height. Consequently, the fraction collector may not be able to detect small
peaks (5 to 10% of full scale) and large peaks (100% of full scale) within the same
chromatogram.
The chromatograms on the next few pages show how to improve collection of sharp
narrow peaks. The shaded peak areas and event marks identify what’s being collected by
the fraction collector.
K-1
Appendix K
Collecting Sharp Narrow Peaks
Figure 1
Figure 2
K-2
Appendix K
Figure 3
K-3
Replacement Parts and Accessories L
1707305 Small bore needle for Code 2 and Code 15 racks with 3-way
valve
L-1
Appendix L
Replacement Parts and Accessories
L-2