CASE No. 24 Commissioner of Internal Revenue Vs Semirara Mining Corporation

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G.R. No.

202922 June 19, 2017


Commissioner of Internal Revenue, petitioner
vs.
Semirara Mining Corporation, respondent

FACTS:
On June 8, 1983, Semirara Coal Corporation (SCC but now SMC) executed a Coal
Operating Contract (COC) with the Ministry of Energy (now Department of Energy) through the
Bureau of Energy Development with a term until the year 2012. SMC has been selling coal to
National Power Corporation (NPC) without VAT until RA No. 9337 took effect on July 1, 2005
where NPC started to withhold 5% final VAT on the belief that the sale of SMC was no longer
exempt from VAT. SMC requested for a BIR pronouncement sustaining its position that its sale
of coal to NPC was still exempt from VAT notwithstanding RA No. 9337, which the BIR
granted through BIR Ruling No. 006-2007.
On May 21, 2007, January 21, 2008, and January 29, 2008, SMC filed with the BIR
Large Taxpayers Division, RDO No. 121-Quezon City, letters with supporting documents
requesting for a refund or issuance of a tax credit certificate (TCC) in the total amount of
P77,253,245.39, representing the final withholding VAT withheld by NPC on its coal billing for
the period of July 1, 2006 to December 31, 2006. Due to the CIR’s inaction, SMC filed on
August 8 and November 10, 2008 its petitions for review with the CTA Division. The CTA
Division rendered decision granting SMC’s refund claim for erroneously paid final VAT
withheld by NPC. The CIR moved for reconsideration but was denied thus filed for petition for
review with CTA En Banc but dismissed for lack of merit.

ISSUE: Whether or not the Section 16 of PD No. 972 was repealed by RA No. 9337. (NO)

HELD:
The Court agrees with the CTA that the tax exemption provided under Section 16 of PD
No. 972 was not revoked, withdrawn or repealed expressly or impliedly – by Congress with the
enactment of RA No. 9337. It further averred that it is a fundamental rule in statutory
construction that a special law cannot be repealed or modified by a subsequently enacted general
law in the absence of any express provision in the latter law to that effect. A special law must be
interpreted to constitute an exception to the general law in the absence of special circumstances
warranting a contrary conclusion. The repealing clause of RA No. 9337, a general law, did not
provide for the express repeal of PD No. 972, a special law. The court also cited the case of
Mecano vs. COA and said that RA No. 9337 does not cover the whole subject matter of PD No.
972 and could not have been intended to substitute the same. There is also no irreconcilable
inconsistency or repugnancy between the two laws.

DISPOSITION:
The instant petition for review is DENIED. The Decision dated April 23, 2012 and the
Resolution dated July 26, 2012 of the CTA En Banc in C.T.A. E.B. No. 793 are hereby
AFFIRMED.

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