1QC - Taining Version Module - Editable
1QC - Taining Version Module - Editable
QUALITY CONTROL
PY
O
C
Volume 1
R
D
AUGUST, 2016
PY
O
C
T
AF
R
D
10. Ms. Ranjana Upadhyay : Quality Coordinator, Labs for Life Project
i
GUIDELINES FOR COMMON STATISTICAL
METHODS USED IN CLINICAL LABORATORIES VOLUME 1
Table of Contents
Chapter 1: Overview 01
1.1. Quality Controls: Ongoing Performance Evaluation: Overview 01
1.2 Method Evaluation 03
1.3 Objectives of the Module 03
1.4 Target Audience 03
1.5 Method 03
1.6 How to Use the Module 03
PY
Chapter 2: Internal Controls: Quantitative
(Statistical Quality Controls) 08
2.1 Internal Controls: Overview 08
O
2.2 Quantitative SQCs: Basic Concepts 13
C
ii
Part 2: Method Evaluation As per
ISO: 15189 5.3.1.2 and 5.5.1 70
4.15 Carryover 94
AF
iii
List of Figures
Figure 1 : How to use the module 04
Figure 2 : Difference between Assayed, Un-assayed and
In-House Control 09
Figure 3 : Different Levels of Controls to monitor Clinical
Decision Levels 09
Figure 4 : An Example of QC insert 10
Figure 5 : Classification of Control Material 13
Figure 6 : Different Kinds of Distribution 15
Figure 7 : 68-95-99.7 Rule 16
Figure 8 : Gaussian Distribution plotted alongside time frequency 17
Figure 9 : Blank Levy-Jennings chart with defined mean and SD 18
Figure 10 : A Gaussian on its side with a frequency, is a LJ Chart 19
PY
Figure 11 : 68-95-99.7 Rule on LJ Chart 19
Figure 12 : 1:3S or 13S denotes a Random Error or a
beginning of a Systematic Error 20
O
Figure 13 : 1:2S or 12S denotes a Random Error or a Systematic Error 21
C
Figure 14 : 2:2s denotes a Systematic Error 21
Figure 15 : 2 of 3:2S denotes a Systematic Error 22
T
iv
Figure 31 : Concept of Total Error (Combination of
Systematic and Random Errors) 34
Figure 32 : Capturing random errors from a Gaussian.
The rationale of using 1.65 as the Z factor. 35
Figure 33 : Rationale of using 1.96 Z factor for calculating RE 35
Figure 34 : Z factor Probability Chart 35
Figure 35 : The Four Key Numbers 36
Figure 36 : Stockholm Hierarchy for TEA 36
Figure 37 : A graphical representation of iIntra and
Inter individual BV 36
Figure 38 : BV Charts (Desirable); An excerpt 37
Figure 39 : CLIA limits defined in different ways percentage,
+/- Absolute values, +/- SDs and combined 38
Figure 40 : Estimating the TEA using labs owns
proficiency testing limits 38
Figure 41 : CLIA proficiency limits; Excerpts 38
PY
Figure 42 : Estimating TEA using reference values (Tonk’s Rule) 39
Figure 43 : (a) TE< TEA, (b) TE>TEA 40
O
Figure 44 : Calculating SEc using the four key numbers & Z factor 40
Figure 45 : Concept of Six Sigma in laboratories 41
C
v
Figure 62 : Percent deviation plot 65
Figure 63 : CCV of common analytes 66
Figure 64 : Youden Plot 67
Figure 65 : Diagrammatic representation of collecting, compiling,
analysis and dissemination of peer group data 68
Figure 66 : Kinds of peer group comparisons made available
in a peer group reports 69
Figure 67 : Example of peer group comparison data, specific for equipment
and method, for 2 levels of QCs with monthly and cumulative
statistics and the number of participating labs and data points 69
Figure 68 : Pre-purchase verification using manufacturer’s
kit insert (An example) 74
Figure 69 : Pre-purchase verification using manufacturer’s
kit insert (example 2) 74
Figure 70 : TEA values from BV for the above examples 75
Figure 71 : Sigma Calculation for the above examples showing unacceptable
Sigma for lower limit of Calcium and upper limits of Glucose 76
Figure 72
Figure 73
:
: Clinical Decision Levels; An excerpt PY
Explanations for regression plots with illustrative examples 82
83
O
Figure 74 : Illustrative example with explanation for Blandt Altman 85
Figure 75 : Making serial dilutions for linearity test
C
87
Figure 76 : Illustrative example of a linearity test.
The test is linear and the error within limits at all dilutions 89
T
vi
INTRODUCTION
CHAPTER 1: OVERVIEW
“ Learning Objectives
At the end of this chapter the learners will understand the following
Overview on quality control in laboratory
Difference between internal and external control
Difference between qualitative and quantitative controls
Difference between ongoing performance evaluation and
evaluation of new methods
How to use this module
PY
1.1. Quality Controls: Ongoing Performance Evaluation: Overview
O
The principles of quality management, assurance and control have become the foundation
C
by which clinical laboratories are managed and operated. ISO 15189 in Clause 5.6
elaborates the need for “Assuring the Quality of Examinations”.
T
1.1.1 Process Control is an essential element of the quality management, and refers to
AF
control of the all activities employed in the pre-examination, examination and post-
examination processes in order to ensure accurate and reliable reports. Sample
R
management and quality control processes are a part of process control. While
sample management points to the process control in the pre-analytical phase,
D
Quality control (QC) monitors activities related to the examination (analytic) phase of
testing. The goal of quality control is to detect, evaluate, and correct errors due to test
system failure, environmental conditions, or operator performance, before patient
results are reported.
1.1.2 Internal Quality Control is the measure of precision, or how well the measurement
system reproduces the same result over time and under varying operating
conditions. Internal quality control material is usually run at the beginning of each
shift, after an instrument is serviced, when reagent lots are changed, after calibration,
whenever patient results seem inappropriate or as per selected QC rules.
PY
not expressed in numerical terms, but in qualitative terms such as “positive” or
“negative”; “reactive” or “non-reactive”; “normal” or “abnormal”; and “growth” or “no
growth”. Examples of qualitative examinations include microscopic examinations,
O
serologic procedures for presence or absence of antigens and antibodies, and many
microbiological procedures.
C
these tests are expressed as an estimate of how much of the measured substance is
AF
serologic testing, the result is often expressed as a titer; again involving a number but
providing an estimate, rather than an exact amount of the quantity present.
D
PY
The module is written keeping in mind the needs of Indian public health labs, to introduce the
concept of quality and to enable the implementation of a robust quality control system.
Assuring the quality of examinations is a requirement as per ISO 15189: 2012. Both internal
O
quality controls and external quality controls (Proficiency Testing) are discussed. Internal
C
controls are discussed with reference to daily monitoring using LJ charts as well as
evaluation of ongoing method performance using sigma metrics. Proficiency Testing (EQA)
T
will include the options of PT programs for different disciplines, interpretation of results and
remedial actions. In addition, Method Evaluation (ME) is included as it is also a requirement
AF
The target audience for this manual is the laboratory professionals, doctors and technicians
who do clinical laboratory testing.
1.5 Method
Regional trainings will be conducted for all institutions served by Labs for Life. Activity
sheets, handouts, PPTs than can be used for onward training are developed and distributed.
In addition, Labs for Life website has a QC toolkit for all the statistical activities described in
this manual. A digitalized version of this module will also be available soon on the Labs for
Life website.
Internal Controls-
Quantitative,
(Statistical Quality PY
Pre-purchase
Assessment
PDCA
O
Control)
(Volume 1)
C
5S
T
Linearity
AF
Internal Controls
- Qualitative and FMEA
Semi Quantitative,
R
Dept. Wise
(Volume 2) Precision
D
RCA
Proficiency Accuracy
Pareto
Testing / EQAS Analsis
(Volume 1)
Biological
Reference Trend
Intervals Analsis
Process
Mapping
PY
details of multi-rule selections in the case of poorly performing parameters. The concept of
Uncertainty of Measurement as a tool for reporting the confidence levels of a lab’s performance is
explained. Using a lot of QC as per new guidelines is described. Some specific control
O
mechanisms employed in certain equipments, such as radar graphs, Bull’s Algorithm are also
explained. The concept of harmonization of equipment as an indicator of comparability of
C
This chapter describes the mechanisms of testing the proficiency of your lab. It outlines the ISO
requirements therein and under this scope describes how several mechanisms of proficiency
testing can be interpreted. Details of scoring systems and judging acceptance as well as a list of
R
PY
Chapter 8: IQC (Qualitative) in Hematology and Clinical Pathology
This chapter describes a few points to keep in mind, where making blood and bone marrow films
are concerned. Some general errors in doing ESR are pointed out. Control mechanisms including
O
pre-analytical and post analytical are enumerated for cavity uids, urine analysis and semen
C
analysis.
T
The processes that happen in histopathology and cytology labs are several. Each step includes
chances of potential error. These should be understood and avoided as part of the quality
assurance process. To this end, each step in elaborated with suggestions of how to manage an
R
PART 1
ONGOING EVALUATION
PY
O
OF METHOD
C
T
PERFORMANCE
AF
R
D
7
CHAPTER 2: INTERNAL CONTROLS:
QUANTITATIVE (STATISTICAL QUALITY CONTROLS)
“ Learning Objectives
At the end of this chapters the learners will be able to answer the following questions:
How to select, reconstitute, store and use the quality control materials
The details of quality control material
Evolution of Quality Control techniques and monitoring mechanism
through statistical process like LJ, Total Error and sigma metrics
How to handle a new lot of quality control
How to set quality requirements for a lab
How to plan a QC program in a lab
Concepts of Uncertainty of Measurement
PY
Quantitative tests measure the quantity of a substance in a sample, yielding a numeric result. For
O
example, the quantitative test for glucose can give a result of 110 mg/dL. Since quantitative tests have
C
numeric values, statistical tests can be applied to the results of quality control material to differentiate
between test runs that are “in control” and “out of control”. This is done by calculating acceptable
T
As a part of the quality management system, the laboratory must establish a quality control program
for all quantitative tests. Evaluating each test run in this way allows the laboratory to determine if
patient results are accurate and reliable.
R
D
PY
or made in-house by pooling sera from different patients.
• Purchased controls may be either assayed or un-assayed.
O
• Assayed controls have a pre-determined target value, established by the manufacturer.
When using assayed controls the laboratory must verify the value using its own
C
methods. Assayed controls are more expensive to purchase than un-assayed controls.
• Assayed controls are more expensive to purchase than un-assayed controls.
T
exact specification.
D
PATIENT CONTROLS
2.1 (c) Availability Critical
Critical high and
Controls are usually available in ‘high’, Abnormal low ranges
‘normal’, and ‘low’ ranges.
Shown in the graphic are normal, abnormal
Normal Normal range
high and low, and critical high and low ranges.
For some assays, it may be important to
include controls with values near the low Abnormal
Abnormal high
end of detection. and low range
Critical
PY
frozen control material.
In the case of liquid controls, understand the storage requirements, the need for aliquoting.
O
In the case of hematology controls, there the guidelines on the maximum number of cap
opening or piercing should be understood and followed.
C
If in-house control material is used, freeze aliquots and place in the freezer so that a small
amount can be thawed and used daily. An example of a QC insert is given below:
T
AF
PY
5) Be available at different concentration levels to assess the measuring range of
the method
O
6) Remain stable before and after opening a vial as indicated by the manufacturer
C
7) Produce minimal vial-to-vial variability
T
In addition to the above stated qualities, other considerations that should be kept in mind are:
AF
• Require availability of clean Class ‘A’ Volumetric pipets and pipetting bulbs.
• Require staff that is capable of
• Accurately pipetting manually Strictly adhering to reconstitution and mixing
instructions provided by the manufacturer
• May experience more vial-to-vial variability (increase imprecision) especially if
improper handling and reconstitution occurs
• Frequently has a shorter opened vial expiry interval
• May result in discarding unused portion (hidden cost consideration)
4) Vendor considerations
• Availability of an inter-laboratory comparison program
• Provide troubleshooting support
• Ability to accommodate standing orders
• Ability to sequester specified lot number and automatically ship and bill as
outlined in the purchase agreement
Dependent controls are typically provided by the instrument manufacturer. This type
AF
of control material also includes what is referred to as “in kit” controls; those control
materials provided as a part of a discrete test kit. Dependent control materials are
often manufactured from the same lot of raw material, using the same manufacturing
R
process, and made in the same facility used to manufacture the instrument, kit or
method calibrators. At some point, the manufacturing process for controls and
D
calibrators splits.
Independent (Third Party) Control Material is manufactured outside the quality
system used to manufacture the instrument, kit or method it is intended to monitor and
whose performance is independent of any design inputs from the instrument, kit or
method manufacturer.
Quality control material (assayed or un-assayed) is a medical device intended for use in a
test system to estimate test precision and detect systematic analytical deviations that may
arise from reagent or analytical instrument variation
Semi-dependent control material is manufactured outside the quality system used to
manufacture the instrument, kit or method it is intended to monitor but is manufactured on
behalf of and with input from the instrument, kit or method manufacturer.
Control
First Part Controls: Risk when the controls and calibrators share common
manufacturing pathway is that they may be insensitive to change affecting
patient samples
Control
PY
instructions for production. Again, the controls may be insensitive to changes
that can affect patient samples.
O
C
Control
T
AF
Third Part Controls: The third-part controls are designed and manufactured free
of any method manufacturer involvement. Therefore, they can often readily
R
PY
Median (the central point of the values when they are arranged in numerical sequence.)
The median of a data set is the value of the middle point, when they are arranged in order.
Using the previous data set and arranging from lowest to highest {2, 3, 4, 5, 5, 7, 9}, we
O
can determine the median by crossing off the lowest and highest values, then the next
C
lowest and next highest value. Continue crossing off values from both ends until only one
value, the middle value, remains {2, 3, 4, 5, 5, 7, and 9}. For this data set, the median is 5.
T
Example: For the following data set containing 6 numbers, {2, 3, 4, 5, 7, 9}, we can
determine the median as follows: 2, 3, 4, 5, 7, 9. for this data set, two numbers, 4 and 5, lie
at the center. To determine the median for this data set, we would take the average of 4
R
and 5 as follows:
D
4+5 = 9/2 = 4.5. The median for this data set is 4.5.
Some characteristics of the median are:
• always exists for a set of data
• unique
• not strongly affected by extreme values
• corresponds to the 50th percentile
PY
O
C
T
All normal density curves satisfy the following property which is often referred to as the
Empirical Rule.
D
PY
The purpose of obtaining 20 data points by running the quality control sample is to
quantify normal variation, and establish ranges for quality control samples. Use the
results of these measurements to establish QC ranges for testing.
O
If one or two data points appear to be too high or low for the set of data, they should not be
C
included when calculating QC ranges. They are called “outliers”.
If there are more than 2 outliers in the 20 data
T
2.2 (g)
PY
Graphically Representing Control Ranges: Levey-Jennings Charts
The laboratory needs to document that quality control materials are assayed and that the
O
quality control results have been inspected to assure the quality of the analytical run. This
documentation is accomplished by maintaining a QC Log and using the Levey-Jennings
C
chart on a regular basis. The QC Log can be maintained on a computer or on paper. The log
should identify the name of the test, the instrument, units, the date the test is performed, the
T
initials of the person performing the test, and the results for each level of control assayed.
AF
The Levey-Jennings charts represent the range graphically for the purpose of daily
monitoring.
R
A Levy-Jennings chart can then be drawn, showing the mean value as well as plus/minus
1, 2, and 3 standard deviations (SD). The mean is shown by drawing a line horizontally in
D
the middle of the graph and the SD are marked off at appropriate intervals and lines drawn
horizontally on the graph as shown below.
PY
An LJ is basically a Gaussian on its side, separated by time as a frequency. If you look
at the figures above and below, this can be understood.
O
C
T
AF
R
D
PY
process control used in industry since the 1950s.There are several rules in the Westgard
scheme. These rules are used individually or in combination to evaluate the quality of
analytical runs.
O
Westgard devised a shorthand notation for expressing quality control rules. Most of the
quality control rules can be expressed as NL where N represents the number of control
C
observations to be evaluated and L represents the statistical limit for evaluating the
control observations. Thus 1:3s or 13s represents a control rule that is violated when one
T
1. 1:3s or 13s refers to a control rule that is commonly used with a Levey-Jennings chart
when the control limits are set as the mean plus 3s and the mean minus 3s. A run is
rejected when a single control measurement exceeds the mean plus 3s or the mean
R
minus 3s control limit. This rule identifies unacceptable random error or possibly the
D
beginning of a large systematic error. Any QC result outside ±3s violates this rule.
Figure 12: 1:3s or 1:3S denotes a Random Error or a beginning of a Systematic Error
PY
Figure 15: 2 of 3:2s denotes a Systematic Error
5. R4S or R:4S - When 1 control measurement in a group exceeds the mean plus 2s and
O
another exceeds the mean minus 2s. This rule should only be interpreted within-run,
C
not between-run. This rule identifies random error only, and is applied only within
the current run. If there is at least a 4s difference between control values within a single
T
run, the rule is violated for random error. For example, assume both Level I and Level II
have been assayed within the current run. Level I is +2.8s above the mean and Level II is
AF
-1.3s below the mean. The total difference between the two control levels is greater than
4s (e.g. [+2.8s – (-1.3s)] = 4.1s). In the above example, though the Level II has not
R
violated a -2 SD level, together the within run QC violates an R4S. Some authors validate
across run R4s violations.
D
PY
application indicates systematic
error over a broader concentration.
O
C
• Greater than 1s
D
9. 7T - When seven control measurements trend in the same direction, crossing the mean,
AF
PY
measurement to its target/ true value (explained later). When the mean changes
from the true mean, there is measuring system is said to have a systematic error or
bias Systematic error is evidenced by a change in the mean of the control values.
O
C
T
AF
R
D
2) The change in the mean may be gradual and demonstrated as a trend in control
values or it may be abrupt and demonstrated as a shift in control values. Bias is the
difference between true or target value and the obtained value.
Bias thus has a value which can be used to eliminate or minimize the offset e.g. by
recalibration or by adjusting raw results with a correction factor.
4) Total Error is the combined value of both accuracy and precision (Discussed later)
PY
TE= SE + RE, where SE is the Systematic Error (Bias) calculated by
O
subtracting the Obtained Lab Mean from the True (Target) Mean and
RE is 1.65 (Z Factor)* SD (or CV)
C
T
bull’s eye.
The bull’s eye represents the
accepted reference value which is
the true, unbiased value. If a set of
data is clustered around the bull’s Figure 23: Difference between Accuracy & Precision
PY
O
C
Figure 26: Recap Increasing Imprecision (a) and Shifting Accuracy (b)
Figure 28: Recap on shifting accuracy and increasing imprecision on a Gaussian: Shifting accuracy (a to c). In figure (a)
the two populations are overlapping and is difficult to distinguish an emerging population. In figure (b & c) the shift
becomes more pronounced and can be easily understood. In figure (d) increasing imprecision gives rise to populations
outside the original Gaussian (Widening Gaussian in pink).
PY
O
C
T
AF
Trend Shift
A trend indicates a gradual loss of reliability in the Abrupt changes in the control mean are defined
test system. Trends are usually subtle. Causes of as shifts. Shifts in QC data represent a sudden
R
• Deterioration of the instrument light source • Sudden failure or change in the light
• Gradual accumulating of debris in sample / • Change in reagent formulation
reagent tubing • Change of reagent lot
• Gradual accumulation of debris on • Major instrument maintenance
electrode surfaces
• Sudden change in incubation temperature
• Aging od reagents (enzymes only)
• Gradual deterioration of control materials • Change in room temperature or humidity
• Gradual deterioration of incubation • Failure in the sampling system
chamber temperature (enzymes only)
• Failure in reagent dispense system
• Gradual deterioration of light filter integrity
• Inaccurate calibration / recalibration
• Gradual deterioration of calibration
As explained earlier, the change in the mean may be gradual and demonstrated as a
trend in control values or it may be abrupt and demonstrated as a shift in control values.
the same measurement procedure, same operators, same measuring system, same
operating conditions and same location, and replicate measurements on the same or
similar objects over a short period of time. Repeatability may be expressed in terms of
R
PY
provisional values may have to be established from data collected over fewer than 20 days.
Possible approaches include making no more than four control measurements per day for
five different days. Sampling from at least a few reconstituted vials will include any errors of
O
reconstitution. For liquid stable quality control products, fewer bottles may be required,
since such materials are expected to exhibit less vial to vial variation. When an opened bottle
C
of QC material will be used for more than one day, the same bottle should be assayed on
several days to allow analyte stability to be reected in the mean value. Also note that the
T
2.4 (b) Establishing the Value of the Standard Deviation for a New Lot of QC Material
If there is a history of quality control data from an extended period of stable operation of
D
the measurement procedure, the established estimate of the standard deviation can be
used with the new lot of control material, as long as the new lot of material has similar
target levels for the analyte of interest as for previous lots. The estimate of the standard
deviation should be reevaluated periodically.
If there is no history of quality control data, the standard deviation should be estimated,
preferably with a minimum of 20 data points from 20 separate days. The analyte stability
after opening a control product should also be considered, and the same bottle tested on
sequential days to include this source of variability in the estimate of SD. This initial
standard deviation value should be replaced with a more robust estimate when data from
a longer period of stable operation become available.
Estimates of the standard deviation (and to a lesser extent the mean) from monthly
control data are often subject to considerable variation from month to month, due to an
insufficient number of measurements (e.g., with 20 measurements, the estimate of the
standard deviation might vary up to 30% from the true standard deviation; even with 100
measurements. the estimate may vary by as much as 10%).More representative
estimates can be obtained by calculating cumulative values based on control data from
quantify the largest variation from the true or target value. Total analytical error is a useful
metric both to assess laboratory assay quality and to set goals. The common evaluation
R
methods are:
Direct Estimation
D
Figure 31: Concept of Total Error (Combination of Systematic and Random Errors)
T
Bias is the difference obtained by subtracting the target value from the lab mean value.
Bias has direction. If the mean is more than the target it is a positive number and if less, a
negative number. But for the sake of calculations, the absolute number has to be used.
R
Example: If the Target is 100, and the Mean is 95, the Bias is 95- 100= -5. The absolute
D
PY
O
C
T
AF
Figure 33: Capturing TE from a Gaussian. 95 % of the error are detected by using 1.65 as a z factor
R
PY
perspective about variability of results within an
acceptable interval and potential significance
Figure 36: Stockholm Hierarchy for TE A
of abnormal findings. A commonly used quality
O
requirement is Total Allowable Error (TEA), which is derived from medically important
analyte concentrations or clinical decision thresholds. A hierarchy of quality requirements
C
has been proposed, and the most stringent quality requirements are based on clinical
outcomes and clinical decision thresholds. Quality requirements may also be based on
T
data about biologic variation of an analyte (BV Values), analytical performance criteria of
AF
2.6 (b) Getting the TEA values: Applying the Stolkholm Hierarchy
D
1) Medical Requirements:
Apart from a few analytes like HbA1C with a TEA specified as as ± 6% by NGSP and
Total Cholesterol ± 9%, HDL-C 13%, LDL-C 12%, Tryglyceride 15% specified by
NCEP, no other analyte has directly defined TEA values.
Note on abbreviations:
AF
PY
O
C
T
In the absence of any guideline, the lab may use the survey reports from earlier PT
reports. As median values are used in PT reports, it will be less affected by outliers
and hence a good indicator of TEA. An example is given above ( Figure 40 ). The CD 4
count reports complied shows a certain variation at each level, in SDs and CVs. A 3*
SD or CV may be applied as the TEA. In the figure, if you take the average CV% it will
be 5%. Three times this is 15%. This may be applied as the % TEA. A count of 100
cells, an acceptable would be ± 15. Alternatively, the lab can use 3 times the
respective CV% against each level.
1. Instrument selection if manu-facturer’s claims such as CV/ SD for Medical Decision Points
for instrument performance are available.
2. TEA can also use for method evaluation to determine whether that instrument’s
analytical performance is adequate.
3. If analytical performance is deemed adequate, TEAcan further be used during
ongoing performance evaluation.
4. TEA can be used to guide comparison of test results across laboratories and clinics
PY
using the same or different analytical methods.
5. TEA can be used to help interpret results from external quality assurance (proficiency
testing) programs or to help interpret results of comparability testing, where a
O
reference laboratory is used to “check” in clinic or other laboratory results.
C
Tools for 1-3 are available in the Labs for Life website. 4 &5 can also be analyzed using
T
It is important to realize that TEA may differ with analyte concentration TEA may differ at
low, or high analyte concentrations.
R
D
PY
O
C
T
AF
PY
O
C
T
AF
R
A six sigma test can fit in 6 SDs on either side of the mean. This means there is no bias and
the degree of dispersion or imprecision is stable. In figure 45, see the first picture. This is
Six Sigma performance where the chances of defects is < 3.4/ million.
In the second picture, the positive bias formation has compromised the margin the mean
can shift, and the Sigma number. Similarly a widening Gaussian due to imprecision can
also breach the limits leading to lower Sigma.
Deriving the sigma metric for an analysis again combines the 4 Key Quality Numbers; Mean,
SD, Target and TEA into one statistic. It benchmarks the performance of the measurement
procedure in relationship to the quality required (i.e. Six Sigma ). Knowing the Sigma
performance of an analyte can be used to select appropriate control rules for a method. .
This is described in later sections.
Sigma= (TEA- Absolute Bias) / SD
or
Sigma= (%TEA -% Bias)/ % CV
Thus essentially the sigma metrics is an extension of SEc but can also be called a sigma-
metric, which is more easily understood in light of current interests in Six Sigma Quality
Management. Depending on the sigma performance on an anlayte, the monitoring rules
for that analyte can be modified. See Figure 46
Please refer to exercise no.13
PY
O
C
T
AF
R
D
PY
on the quality goal required clinically and the performance characteristics of each
test/analyzer. The laboratory's efforts would be focused on the analytes that require the
maximum control. The ideal IQC design should be derived for each individual test in a
O
multi-test system, selecting where possible the combination of the highest Percent Error
Detection (Ped) and the lowest Percent False Rejection (P fr).
C
A single-rule QC procedure uses a single criterion or single set of control limits, such as
AF
either the mean plus or minus 2 standard deviations (2s) or the mean plus or minus 3s.
Multi-rules QC on the other hand, uses a combination of decision criteria, or control rules,
to decide whether an analytical run is in-control or out-of-control.
R
D
The N and R
N represents the total number of control measurements that are available at the time a
decision on control status is to be made. If 2 levels of (control levels)measurements are
available within one run, N=2. If three are available then, N=3.
R represents the number of runs
Example: If 2 levels of control measurements are available and two runs are available ,
N=2 & R=2 and the total available data points are 4 per day.
1:2s rule may be used as a warning to trigger application of the other rules, thus anytime a
single measurement exceeds a 2SD control limit, respond by inspecting the control data
using the other rules.
The power of daily monitoring PLUS The power of periodic review = 13s/22s/R4s/41s/10x
PY
For certain types of tests, notably hematology, immunoassay and blood gas, controls
tend to be run in three's, i.e., one low control, one middle control, and one high control.
O
For situations like this, it isn't practical to use the "Classic Westgard Rules"; those rules
were built for controls in multiples of 2. So when you're running 2, 4, 8 controls, use the
C
"classic" rules. When you're running 3 or 6 controls, use a set that works for multiples of
threes: In this case:
T
AF
The power of daily monitoring PLUS The power of periodic review =13s/2 of
32s/R4s/ 31s/12x
R
The length of an analytical run must be defined appropriately for the specific analytical
system and specific measurement procedure. In laboratory operations, control samples
should be analyzed during each analytical run to monitor method performance. The
length of the analytical run can be defined as an interval over which the risk (severity and
likelihood) of unexpected events that could impact precision and accuracy has been
mitigated to a tolerable level by virtue of the operational characteristics of the testing
system. The user should define the run length for the specific application in their own
laboratory because the operating conditions, workload, and application of the
measurement procedure in their laboratory may differ from nominal conditions evaluated
by the manufacturer.
The user should define the period of time or series of measurements within which
validation of the measurement procedure is important, based on the expected stability of
the measurement procedure, the number of patient samples typically being analyzed,
cost of reanalysis in the event of a QC failure, workow patterns, operator characteristics,
and the clinical impact of an undetected error condition existing for a period of time before
the next QC measurement(s). Stability of an analyte in patient samples is a consideration
PY
at the beginning and the end of the run to detect shifts, might be spaced evenly throughout
the batch to monitor drift, or distributed randomly among the patient samples to detect
O
errors. In any case, the QC results would be evaluated before patient results are reported.
For a high-volume analyzer that continuously produces test results, an appropriate
C
analytical run might be defined as a certain interval of time, then QC samples would be
analyzed and evaluated at the beginning of a run and then again as each run (i.e. ., the next
T
time interval or defined number of samples) occurs. If a quality control fault is detected,
AF
results reported since the previous quality control event should be reviewed.
CAUTION: Routine placement immediately after calibration materials may give falsely
R
low estimates of analytical imprecision and will not provide any estimate of shift or drift
D
PY
5. Interpret multirule to help indicate the occurrence of random error or systematic error.
O
2.8 (g) Tools to Use to Determine the Appropriate Control Rule(s)
C
If medically important errors can be detected 90% of the time (i.e., probability of error
detection of 0.90 or greater), then a single rule QC procedure is adequate. If 90% error
T
highly automated and very precise chemistry and hematology analyzers. However, the 2s
control limits or the 1:2s control rule should be avoided to minimize waste and reduce
R
costs. Earlier generation automated systems and manual methods will often benefit from
the improved error detection of multi-rules QC procedures.
D
There are many tools available to understand the rule(s) that should be used to alert you
to a significant error. The tools include power function graphs such as Sigma-Metric Rule
Selection Tool, critical-error graphs, QC Selection Grids, charts of operating
specifications (OP Specs chart), and the QC Validator, Westgard advisor by Bio-Rad, Opt-
mizer and EZ Rules .
In this manual, Sigma Metric Rule selection tool will be explained as it tis the tool
described in CLSI guidelines.
PY
In the example below, a SEc of 2.5 (Sigma 4.15) is being evaluated for appropriate QC
rules. The graph that intersects at 0.9 or 90% closest is graph number 3. (Please note
graphs 3 and 4 crossing over near 0.6 of the Y axis). The set of rules appropriate for Graph
O
3 is: 13s/22s/R4s/41s, N4 and R1. This means multirules as stated above, for 4 controls
available at each run, for 2 runs, and a false rejection of 0.03 or 3%.
C
T
AF
R
D
Figure 47: Technique for using Sigma rule selection tool for QC rules in the lab
PY
measurements are needed in a single run.
( N = 4 , R = 1 ) , o r a l t e r n a t i v e l y, 2 c o n t r o l
measurements in each of 2 runs (N=2, R=2), using
D
PY
This example of a methods decision chart
shows allowable total error. Allowable
O
inaccuracy (% bias) is plotted on the y-axis
versus allowable imprecision (% CV) on
C
4-sigma quality.
D
PY
O
C
T
AF
R
Clinicians compare most measurement results with reference values and with previous
results from the same patient. Results should therefore be reliable and accurate. But the
inherent errors could be misleading, rendering ongoing monitoring by clinicians difficult.
The MU approach focuses on identifying the dispersion of results that might have been
obtained for an analyte if a sample had been measured repeatedly instead of once. CLSI
defines MU as associated with the result of a measurement, that characterizing the
dispersion of the values that could reasonably be attributed to the analyte. To do this, the
MU approach uses available data about repeated measurements from a given measuring
system to define an interval of values within which the true value of the measured analyte
is believed to lie, with a stated level of confidence. The parameter may be, for example, a
standard deviation. The term measurement uncertainty tends to give the wrong
impression, as it is actually a quantitative indication of the level of confidence, or
belief, the laboratory has about the quality of a result.
ISO 15189 mandates the determination of measurement uncertainty of all measurement
procedures. All types of measurement that have a magnitude expressed as a number and
a reference need to define the MU as per ISO.
PY
systematic effects, such as components associated with corrections and reference
standards, contribute to the dispersion should ideally be included. However, the
calculations of MU assumes that the bias cannot be estimated correctly and hence is not
O
considered in the estimate of MU. The MU approach assumes that known bias is
C
eliminated or minimized e.g. by re-calibration. Further, just as a bias value cannot be
exactly known, bias cannot be completely eliminated. The MU approach recognizes that
T
the value used for bias correction has an associated uncertainty, being the combination of
the uncertainty of the reference value itself.
AF
Thus some of the components like imprecision of the measuring system may be
evaluated from the statistical distribution of the results of series of measurements and can
R
bias value used if bias was eliminated or minimized may also be characterized by
standard deviations as expanded uncertainty. Since it is rarely possible in practice due to
limited time and resources, the extended uncertainty of a measurement result is usually
evaluated with a mathematical model using the law of propagation of uncertainty.
PY
• k=1.00 (64.90%)
• k=1.00 (96 .95%)
• k=2.00 (95.45%)
O
• k=2.00 (58 99%)
C
• k=3.00 (99.73%)
T
AF
PY
In summary, MU does not estimate error, but provides a quantitative estimate of where the
true value of a measured analyte is believed by the laboratory to lie, with a stated
O
confidence level. MU is therefore an essential parameter of the reliability of measurement
results.
C
T
• 100 mg/dL +/- 6 mL at 95% confidence level. – Defines the expanded uncertainty at
D
Interpretation
Bull’s algorithm detects only systematic errors and it has its own control chart and its own
rules. If Bull’s algorithm is used for the quality control of erythrocyte indices the control
limits of Bull’s chart are B X ± 3%. The range ± 3% comes from the biological variation of
the erythrocyte indices which is around 1%. Any shift in calibration will result in shifting
averages provided the population served is, within reasonable limits, the same. If either of
PY
two criteria are satisfied: (1) the Bull's mean of one of the red blood cell indices is outside
its 3% limits, or (2) the average of three consecutive Bull's means is outside its 3% limits,
O
the equipment requires attention. The mean of each batch is compared to Bull’s mean
and its action limits, i.e. the percent deviation of Bull’s mean.
C
T
AF
R
D
In the above example, the MCV and MCH are above 3% of the target. Since both these
have, in their calculations RBC count as the denominator, it can be assumed that the RBC
count has fallen due to calibration errors. A total of 6 data points have been plotted on the
upward trend, pinpointing the time the defect has occurred to about 120 tests earlier
(6*20). This will aid the lab in the root cause analysis tremendously.
PY
For points which fall beyond the upper or lower limit, a red “X” is plotted on the upper or
O
lower limit. Data equals the target value: Plotted on the central line. (Blue line in the graph)
C
Data exceeds the upper limit: Plotted on the upper limit line as a red “X”.
Data falls below the lower limit: Plotted on the lower limit line as a red “X”.
T
In the example below, RBC is higher than acceptable and Hb is lower than acceptable and
AF
“ Learning Objectives
At the end of this chapters, the learners will be able to understand the
ISO requirements for proficiency testing (Inter-laboratory comparison)
Different mechanism for proficiency testing
Assessing acceptability of the proficiency testing reports
Frequency and scope of testing of some commonly used EQA in India (in
annexure)
External Quality Assurance monitor the accuracy of the laboratory’s methods on an ongoing basis.
PY
It enables the lab to compare itself with others using the same method for the same analyte.
Essentially EQA involves use of the same sample in several labs and comparing the lab’s results
O
with that of others performing the same test by the same method. Participation in EQA enhances
the confidence of the lab in its results. It also enhances the users’ confidence in the lab they use for
C
their tests.
T
Several terms are used interchangeably to denote External Quality Assurance processes.
ISO 15189: 2012, Clause 5.6.3 uses the terms Inter laboratory Comparisons (ILC) and
R
The accreditation standard for ILC/EQA is 17043. The laboratory should strive to
participate in an ILC/EQA program accredited by or at least substantially fulfill the
relevant requirements of 17043.
ISO also mandates that the ILC/EQA samples should be integrated into the routine
laboratory testing process and not be treated as special category. It also requires to be
run by the same staff that runs tests. It also says that the ILC/EQA samples should be run just
once with no confirmatory run.
Also as per regulatory requirements, the labs are required to keep the raw data of
analysis such as equipment printouts of proficiency testing, for verification in audits
F. Mean
G. Expected Range
T
H. SD
AF
The following figure shows an example. Analyte name, units of reporting, sample IDs,
D
The N
The N is the number of participating labs in the PT program. The providers may define and
compare (explained later) the participant lab’s result in several ways.
If N is too low, statistics may not be calculated for that peer group by the PT provider. The
higher the N, the better an estimate of the target value can be determined for that PT sample.
The higher the N, the more data points can be used to calculate the SD for the group. The
higher the N, the less impact aberrant results or incorrectly defined outliers will have on the
group’s SD and/or mean. At the least lowest minimum N of 10 is required. An N of 100 gives
very good anchoring of the mean. A 30 in is an acceptable good number.
• as part of all reports submitted for that analyte or;
• more specifically as part of the reports performed by the same method for that
•
anlayte or;
PY
most specifically, by the same method and equipment as the participant lab, for
O
that analyte;
• N is equally important in all the above scenarios
C
T
and standard deviation for the group. The program will generally report your
performance relative to the group. The difference between your test results and the
T
expresses the difference in terms of the number of standard deviations from the overall
mean. Thus SDI/Z-score is a calculated value that tells how many standard deviations
R
the reported value is from the expected value for that material. It is calculated by taking
the difference between the reported value and the expected value, then dividing by the
D
standard deviation observed for that control material from the analyses in all
participant labs. For example, for reported value of 112 for an expected value of 100
and a standard deviation of 5, the SDI/Z-score is 2.4 [(112- 100)/5] denoting 2.4
standard deviation in the positive direction from its expected value
On a series of specimens, if you observe SDIs such as +1.5, +0.8, +2.0, +1.4, and +1.0
(all positive), this suggests that your method is generally running on the high side and is
biased, on average, by +1.3 SDI.
PY
O
Figure 54: Attributes of EQA reports (3)
Please note that SDI/Z score has both value and direction, indicating that it can be a
C
The histograms indicate the performance in the current sample, whereas the line graphs
indicate the performance in the past 12 months.
Please note that the lab has been showing a consistent positive bias for the past 8
months. (Graph in the green circle, with months on the X axis and Z scores on the Y axis).
PY
Below that is another line chart, Yundt Chart (Blue circle with Expected values on the
X axis and Z score on the Y axis). This shows more positive bias points at higher
O
concentrations. Both these graphs together tell you about a shift in accuracy
C
towards in the positive direction over a period of months, especially in higher
concentrations of the analyte.
T
AF
R
D
PY
with details of ranges and SDs, Z scores and RMZ etc. patterns of bias in the upper level in Yundt plot
The Comparator
O
To continue with the above figure, see
C
Thus the best indicator of accuracy can be obtained by comparing with the same method
and equipment. The lab should understand the comparator in the program it is
participating in
PY
O
C
3.2.3 (e) The Target Score (TS) and %Deviation by Concentration Chart
TS allows participants to assess their performance at a glance.
The TS relates the %Deviation of the reported result from the Mean to a Target Deviation
R
for Performance Assessment (TDPA). TDPAs are set to encourage participants to achieve
D
PY
O
C
T
AF
R
D
PY
the value obtained after
excluding results, from labs
with same method, which are
O
> 3SD of Method Mean and
recalculating the mean after
C
PY
of each level’s value to the group’s performance. Youden plot is a rectangular chart of
which the four angles correspond to the control limits of the two control levels [-4SD -
+4SD]. The acceptable part, the mid-zone and the rejected part have different colors.
O
Each dot represents a different laboratory and therefore Youden plot describes the whole
EQAS scheme. Dots (laboratories) that lie across the diagonal of the rectangular, at 45o
C
(The Manhattan Mean or MM), but are far from the center correspond to laboratories with
proportional analytical error. The greater the distance from the center, the greater the
T
which the performance is considered acceptable for this specific analyte. The service
providers mark your lab among the dots.
R
In India, The CMC Hemostasis EQAS adopts this scheme in addition to the bar graphs.
Both peer and method comparisons are made and the acceptability reported as within/
D
Out-with consensus.
PY
• Your laboratory receives a report indicating your analytical performance.
O
Consensus Based Metrics such as SDI for accuracy and CVI for comparison of your lab’s
precision to the other participant labs is also provided. SDI has been discussed in the
C
earlier section. CVI is the Coefficient of Variation Index and is calculated by dividing the
lab’s monthly CV by the CV of all the values. Ideally, CVI 1.0, since your values are from
T
a single lab, while the peer CV is from several laboratories. The smaller the number, higher
AF
requiring investigation.
D
Figure 65 : Diagrammatic representation of collecting, compiling, analysis and dissemination of peer group data
As in the Proficiency Testing Comparators, the ILC groups can be your peer using the
same method and equipment (blue arrow) or that of the all-labs group (red arrow). Also
monthly as well as cumulative data is made available. (Figure 66)
The figure 67 below shows an ILC report for Direct Bilirubin by diazotization method (red
horizontal circle), done on Beckman Coulter Equipment AU 400 to 5800 (red horizontal
circle), by 153 labs collecting 22,609 data points (L1 & L2, Cumulative). Level 1 and 2
controls (Red and Green vertical circles) are used. Monthly and cumulative data (Red and
Green dotted arrows) are collected and computed. Mean, SD CV, number of data points
and number of labs are shown in the report.
PY
Such a robust mean allows anchoring as the true/ target value for any kind of comparison
O
and calculation. Please also refer to the advantages of having such a target value in the
IQC monitoring, enabling the calculation of TE, SEc and Sigma-metrics.
C
ISO also allows this kind of comparison as an alternative approach albeit in the absence
T
Figure 67: Example of peer group comparison data, specific for equipment and method, for 2 levels of
QCs with monthly and cumulative statistics and the number of participating labs and data points
Some labs also do inter-observer variance as a substitute to exchanging samples with other
laboratories. For unstable analytes like semen analysis where time lapse affects the motility,
such measures may be acceptable. Decisions on these may be taken and documented by
the lab in alignment with the requirement of any accreditation bodies.
5. Transcription errors
Please refer annexure 6B for EQA (PT failure checklist) corrective action format
D
Actual Analytical Errors should immediately lead to serious investigations and root
cause analysis.
a. Relook at the IQC data
b. Are there trends? High/low bias?
c. Change in reagents?
d. Changes in calibrators?
e. Look for acceptance testing details, lot verifications.
f. Storage of reagents, Calibrators?
g. Change in the environment?
h. Water quality?
I Operator?
j. Investigate Equipment performance: aspiration system, incubators, cuvette systems,
optical system, refrigeration system
PY
METHOD EVALUATION
O
C
T
AF
71
CHAPTER 4: METHOD EVALUATION
“
4.1
Learning Objectives
At the end of this chapter, the learners will be able to understand the
Difference between validation and verification
Pre-purchase assessment of equipment using statistical tools
Setting up of acceptance testing program for newly procured equipment
PY
activity. Verification is simply verifying the manufacturer’s claims for performance
specifications. It is typically performed in a clinical laboratory for implementing an FDA-
approved instrument/method. It is a much simpler and streamlined method than validation.
O
C
ISO 15189: 2012, in clause 5.3.1.2 mandates equipment acceptance testing. Performance
specifications as claimed by the manufacturer is derived under ideal conditions. The
T
working condition of the lab may not be able to replicate that ideal condition. Besides, the
AF
transportation of the equipment can affect the factory settings. Thus it is incumbent on the
laboratory that upon installation, the equipment is verified and the claims of the
manufacturer reestablished.
R
D
As per 5.5.1 it is also incumbent upon the laboratory to use validated examination
procedures. These procedures are also to be subjected to independent verification in the lab
by obtaining objective evidence in the form of performance characteristics, to establish the
claims put forward by the manufacturer.
Acceptance testing may further be modified into performance evaluation for fitness of
purpose, by using sigma metrics.
This section explains the process of this verification and performance evaluation. In addition,
the section explains a method for assessing the “fitness for purpose” of the equipment prior
to purchase, by calculating the sigma metrics, using the manufacturer supplied
performance data. An FDA approved method just means that the claimed performance
specifications have been verified. It does not necessarily mean that the method performance
will be acceptable for the purpose for which it is intended. The onus is on the lab to
understand this and pre-verify the suitability of the method.
Installation Qualification
Responsibility of Manufacturer
Operational Qualification
PY
Responsibility of Manufacturer
O
C
Responsibility of Manufacturer
AF
R
D
Acceptance testing/Method
Evaluation/Performance Qualification
Responsibility of Lab
This module will discuss 2 aspects where the laboratory’s responsibility dwells primarily.
1) Pre purchase assessment of methods or equipment
2) Acceptance Testing
Please refer to the Equipment Management Module of Labs for Life for details of the
other aspects.
Let us consider two examples, calcium and glucose, from certain product inserts
PY
O
C
T
AF
R
D
Figure 68: Pre-purchase verification using manufacturer’s kit insert (An example)
E.g. Calcium
• To arrive at sigma metrics 4 key values are required. Target Value, Observed Value, % CV/
SD and %TEA/ TEA
• Precision details: The CV% for Calcium at 3 Clinical Decision Levels, 8.12, 12.48 and 13.2
mg/dL are 1.34. 0.68 and 0.84 respectively. (Green brackets). The Clinical Decision
Levels may be considered as the Target Values for which the Sigma is to be assessed.
• Accuracy details are given as method comparison where patient samples were used to
compare the method with a standard method. 3 values are to be noted, Correlation
coefficient denoting the comparability and the slope and intercept denoting the
Proportional and Constant parts of Systematic error. (The details of these are explained
along with Method Validation in later sections). Using the formula Y’= mx+b, where m is
the proportional error, x is the clinical decision level and b is the constant error, the Y or Y’
can be calculated. Y’ becomes the Observed/ Obtained value, if the method is used, for
the Target Values. From Y’, the bias (Systematic Error) and % Bias (%Systematic Error)
PY
may be calculated using the formula SE%= (SE/ Clinical Decision Level) *100. % TEA or
TEA may be chosen from any reliable source. Sigma calculations can be done as shown in
figure 71.
O
C
T
AF
R
D
Using the data provided by the manufacturer, and the TEA as per BV (Desirable), sigma
metrics have been calculated for calcium and glucose, at the clinical decision levels,
chosen by the manufacturer. The values obtained should be checked against the quality
specifications set by the lab. In the example given, calcium method is showing sigma of
PY
less than 3 at the lower clinical decision level. Understanding the method’s suitability
before purchase will enable the lab to decide optimally. Post purchase validation may
prove futile in such a situation where the manufacturer’s claims itself proves inadequate to
O
meet the requirements of the lab.
C
first design a verification plan describing how they will satisfy each of these requirements.
The plan must also detail the acceptability criteria for each element.
R
After completing all of the exercises, results should be compiled and filed in an organized manner.
D
PY
Put into routine use
O
C
4.6 Understanding Quality Requirements
The lab has to define its quality requirements to ensure that the test selected meets intended use for
T
that test. It is the laboratories’ responsibility to the define the quality required and then judge the
acceptability on the basis of the performance observed in the laboratory against the goals selected.
AF
The lab also has to verify the claims by the manufacturer for specific performance characteristics
as per quality specified by the lab. (See below as an example, where the laboratory selects the
R
sigma-metric of 3 as the minimum performance quality required for this selected test to meet,
before it can be judged acceptable. If the lab chooses the quality requirement as TE = Bias +3
D
SD, and TEA is chosen from CLIA, then using the data from the exercises, the lab has to calculate
the Total Error using that formula. Bias +3 SD should be less than the CLIA TEA. Alternatively the
lab may choose a defendable and attainable Sigma limit to refer the verification against.
Care must be exercised that the quality specifications chosen should be both attainable
and defensible.
TE<TEA
Meet or exceed manufacturer’s performance specifications and/or
If the lab chooses 3 SD as the quality specification and CLIA as the chosen TEA, then,
TE= Bias + 3SD < CLIA TEA
(%TE= %Bias + 3CV% < CLIA %TEA)
4.8 Precision
PY
Precision is the agreement of the measurements of replicate runs of the same sample.
O
Replication experiments are performed to estimate the imprecision or random error of the
analytical method. Precision is measured in terms of coefficient of variation (CV).
C
EP15: a five-day procedure to verify that imprecision meets the claims of a measurement
procedure (EP15 is most frequently used by clinical laboratories for method evaluation.)
T
4.8.3 Long-Term (Between-Run/Between Day Labs for Life QC Tool: LJ with CV trends)
PY
A. Material Used:
1. Two / Three levels (Low/High or Normal/Abnormal)
2. Control Material. A lab may already have this data available from their daily QC runs.
O
B. Testing: Run the QC once a for 20 days or 4 times a day for 5 days to collect minimum 20
C
data points
C. Acceptability criteria:
T
b. Sample Criteria
PY
i. A minimum of 20 samples that cover the reportable range of the method and include
O
points near the Medical Decision Points.
C
ii. Patient, quality control, and proficiency testing materials may be used.
iii. 50% of the selected samples must lie outside of the current reference range.
T
c. Testing
AF
Linear regression consists of finding the best-fitting straight line through the data points of
the 2 sets of data.
PY
1. r. When 2 sets of data are plotted on a graph with the reference method as the X axis and
test method as the Y axis, best-fitting line through these points is called a regression line.
O
r is a statistical measure of the degree of agreement between 2 sets of data about how close
C
the data are to the fitted regression line. This can be a helpful tool in determining the strength
of the relationship between two variables as we can predict scores of one variable from the
scores of the second variable. This valuable numerical measure of association between two
T
indicating the strength of the association of the observed data for the two variables.
• 0 says no relationship exists
R
PY
The test is 40% more than the reference value. The error is
proportional all levels and thus the m of the Y’= mx+b. The formula
requires multiplication of the value of x by 1.4 to get the predicted Y.
The blue and red lines start from 0 but the gap widens as the values
O
increase.
There is no b value in this case as there is no constant error
C
r is 1 denoting good correlation despite the proportional error. .
Proceed to Sigma Metrics.
T
AF
In this graph there is both constant and proportional errors which are
quantified by the formula mx+b. These numbers can be used for any
predictions of Y. As the r = 0.998, the method is comparable and the
R
Here the r is 0.751. The fact is evident from the visual assessments as
these are exaggerated numbers. However, for numbers with smaller
differences, the r should be monitored before error calculations are
assessed. Any value< 0.975% shows lack of correlation and
requires repeat process with more samples.
PY
performance of the new method at each clinical decision point using the formula,
Sigma = (TEA- Bias)/SD or (TEA%- Bias %) / CV%. Judge acceptability. as per defined
quality specifications of the lab (See below).
O
The lab should define in its quality specifications about acceptable performance.
C
In addition to Sigma-Metrics or instead of Sigma Metrics, the lab can opt for comparisons
of TE with TEA as follows
T
AF
OR
(%TE= %Bias + n* CV% < CLIA %TEA)
RECAP
TE<TEA
Meet or exceed manufacturer’s performance specifications and/or
TE= Bias + n* SD < CLIA TEA
(%TE= %Bias + n* CV% < CLIA %TEA)
And / Or
Sigma Metrics; A sigma of >3
(or as decided by the quality requirement of the lab)
As seen in the ongoing method evaluation, it will be good to evaluate the method for
sigma scale, at all clinical decision levels.
PY
difference plot is done. The concept of Blandt Altman is explained below. This can also be
easily done using scatter plots on the Excel.
O
Regression Plots Interpretations
C
PY
The difference and % difference plots show all
values on the upper side of Zero (red arrow).
Difference (blue diamonds) and the % Difference
(red squares) are all above zero. At the lower
O
concentration of analytes, however the %bias is
more pronounced between 20-40%. At higher
C
concentrations, the %bias is less, between 10 and
20%. That the % Bias is more conclusive is evident
from the plot. At lower levels, the unit bias is small,
T
Blandt Altman plots thus give bias and % bias plots in addition to the linear regression
D
data and valuable details for visual assessment. The lab is now required to assess the
data elicited against its quality specifications. Visually scan for significant and dramatic
differences at the upper and lower ends of the range. Positive or negative biases should
be addressed by repeating the accuracy exercise. In the event of persistent biases, a
reevaluation biological reference range must be done
4.10 Linearity
Linearity studies are performed to determine the linear reportable range for an analyte. The
linearity for each analyte is assessed by checking the performance of recovery throughout
the manufacturer’s stated range of the testing system. This is done using a set of standards
containing varying levels of an analyte in high enough and low enough concentrations so as
to span the entire range of the test system. Therefore, the demonstration of the linear range
requires a series of known concentrations or known relationships established by dilution. A
quantitative analytical method is said to be linear when measured results from a series of
sample solutions are directly proportional to the concentration or activity in the test
i. The Analytical Measurement Range (AMR) is the range of analyte values that a
method can directly measure on the specimen without any dilution, concentration, or
other pretreatment not part of the usual assay process. AMR validation is the process
of confirming that the assay system will correctly recover the concentration or activity
of the analyte over the AMR. The manufacturer defines the AMR – but it is the
laboratory’s responsibility to verify it.
ii. The Clinical Reportable Range / Reportable Range (CRR) is the range of analyte
PY
values that a method can report as a quantitative result, allowing for specimen
dilution, concentration or other pretreatment used to extend the AMR. The laboratory
must specify the maximum concentration or dilution that may be performed to obtain
O
a reportable numeric result.
C
A linearity study is used to establish or verify the measuring interval for a measurement
T
method. Measuring Interval: the interval between lower and upper numerical values for
which a method can produce quantitative results suitable for the intended clinical use.
AF
CLSI Guideline for Linearity – Measuring Interval EP06: procedures to verify or establish
D
range. Ensure that both specimens meet storage and stability requirements as stated by
the manufacturer.
4) Prepare 5 pools for testing as follows:
i. Label the low specimen Pool 1 and the high specimen Pool 5.
ii. Prepare Pool 2 (75/25) with 3 parts Pool 1 + 1 part Pool 5.
PY
iii. Prepare Pool 3 (50/50) with 2 parts Pool 1 + 2 parts Pool 5.
iv. Prepare Pool 4 (25/75) with 1 part Pool 1 + 3 parts Pool 5.
v. Pool 5 is the High sample
O
6) Care must be taken to mix each pool thoroughly, and to protect the pools from
C
3) If one value deviates greatly from the others due to random error, it may be removed from
D
3) The recovered mean values will be plotted versus the corresponding assigned values. A
best-fit straight line will be drawn to connect the points on the graph with greater emphasis
on the first three points when drawing the best-fit line. Alternatively, the scatter plot may be
used on excel or Labs for Life QC Tool: Linearity may be used. Yet another alternative to
creating a graph is to use the Linear-data Plotter located on the www.westgard.com
website.
4) The plot will be visually inspected for a linear relationship. If using a paper plot, you may
not be able to go further. The visual inspection for linearity would also suffice.
5) If using a scatter plot on Excel/ Labs for Life/ Westgard, note the Slope and Intercept
derived from the regression graph.
PY
6) Y’ is calculated using formula Y’= mX + b. (Green Highlighted Column)
10) For enzyme determinations and other assays with results in high numerical values,
AF
the Y—intercept may be much higher with no clinical significance. (In the figure
below, the intercept is 5.6) The Y— intercept for assays with low numerical values
R
11) The predicted Y (Y’) value will be subtracted from the associated recovered/observed
mean value (Y-Y’). (Lavender Highlights, column 1) to get the absolute difference
12) % Difference will be calculated by the formula, (% Difference = (+/- Diff / y')* 100/ Predicted
Mean)* 100. This difference is the systematic error due to non-linearity. (Blue Highlight)
13) Systematic error will be compared to 50% of the total allowable error ( TEA:Yellow Highlight)
PY
Figure 76: Illustrative example of a linearity test. The test is linear and the error within limits at all dilutions
O
C
T
AF
R
D
Figure 77: Illustrative example of a linearity test. The test is linear in the first three dilutions.
The error within limits in the first three dilutions only. The limits of linearity, in this case is less than the manufacturer’s claim.
In figure 77, the dilutions yield non-linear values at higher levels. As mentioned earlier, if
the slope is outside the acceptable range, examine the results of the highest standard
first. It is possible that the test is nonlinear at its highest value. In the above example, Pool
4 and 5 values are out of linearity. A regression graph shows unacceptable slope and
intercept values. However, a line joining the lower points and the regression plot of the
same acceptable values. Fig 77, graph on the right after removing the higher values. In
this case the validated linearity is up to 354. The higher values exceed acceptable limits in
comparing with the 50% of TEA.
Note the following terminology and corresponding figures as per the example above:
1. Manufacturer’s Claimed AMR: 0-700
2. Linearity Range: 6-704
3. Validated AMR: 6-700
4. Clinical Reportable Range: 6-7000
PY
4.11 LoD / LoQ Limit of Detection (LoD) & Limit of Quantification (LoQ) (sometimes
referred to as “Analytical Sensitivity”)
LoD/ Sensitivity: the lowest amount of analyte (measurand) in a sample that can be
O
detected with a stated probability. Sensitivity is the lowest concentration of an analyte that
C
can be measured. For an FDA approved, unmodified method, the manufacturer’s stated
sensitivity may be used. However, the LoD will be verified for immunoassays, therapeutic
T
drugs, drugs of abuse, cardiac markers, and tumor markers. LoQ: the lowest amount of
AF
analyte (measurand) in a sample that can be quantified with acceptable precision and
bias under stated experimental conditions.
R
Usually, laboratories review and accept the manufacturer’s claims for LoD and LoQ. But
these characteristics can be tested by laboratories using: CLSI Guideline for LoD and LoQ
D
EP17: procedures for verifying or establishing the LoD and the LoQ. This module is not
explaining this concept further.
But these characteristics can be tested by laboratories using: CLSI Guideline for Interference
EP7: procedures for testing constant error due to interference. This module is not explaining
PY
When a new analytical equipment is installed the Biological Reference Range relevant for the
target population should be determined. Laboratories can produce reference intervals in a
variety of ways, including testing procedures found in CLSI Guideline for Reference Intervals
O
or Decision Value C28.
C
Procedures for establishing a reference interval are
• Verifying the suitability of a manufacturer-proposed reference interval
T
• Transference from the previously used reference interval by using the slope and intercept
AF
As said before, the Reference Interval (or Reference Range) is the range of test values
expected for a designated population in which 95% of the individuals are presumed to be
healthy (or normal). In some analytes reference interval have been replaced by decision
limits established by international consensus. For example, cholesterol (NCEP) and HbA1c
(ADA). For such analytes there is no need establish or verify the reference intervals. For such
analytes, there is no need to establish de novo or even verify the reference intervals. Rather,
laboratories must concern themselves with the accuracy of the results they report; that is,
that cholesterol values they report are not appreciably different from the values that are
reported by a certified reference laboratory on the same samples. For such analytes, the
onus falls on manufacturers to ensure their methods are traceable and on individual
laboratories to ensure they run those methods correctly (using peer group, quality control,
proficiency testing, etc.)
In instances, if medical decision limits will be used for interpretation; ensure the method
being used has validated reference intervals traceable to certified reference material and the
accuracy of your method at those medical decision levels is maintained. You should cite the
source of the medical decision limits to be used by your organization, in your reports.
PY
If Then
90% of samples are within the
The reference range is verified.
reference range
O
Re-evaluate the range being verified. Re-
< 90% of samples are within the
C
evaluate the healthy volunteer qualifications.
reference range
Collect and evaluate 20 additional samples.
T
Evaluation of data
Plot the data in a histogram and visually evaluate the frequency distribution and outliers.
Eliminate outliers based on visual examination and clinical experience.
Use a non-parametric method to determine the reference range.
Multiply the total number of samples +1 by 0.025 to determine the sample number that
represents the low end of the range.
Example: Total number of samples= 120.
Low end = (120 + 1) x 0.025 = 3.025 = 3.
Sample 3 is the low end: 8.9 mg/dL.
Multiply the total number of samples +1 by 0.975 to determine the sample number that
PY
represents the high end of the range.
Example: Total number of samples= 120.
High end = (120 + 1) x 0.975 = 117.975 = 118.
O
Sample 118 is the high end: 10.2 mg/dL
C
Use these rank values to estimate the upper and lower reference limits.
Example: Reference range is “Sample 3 to Sample 118” or 8.9 - 10.2 mg/dL
T
Since the assumption is that 95% of the population is healthy, removing 2.5% from the upper
AF
The CLSI C28-A2 describes different ways for a laboratory to validate the “transference” of
established reference intervals. Pediatric reference intervals often require this approach
because of the difficulty in obtaining sufficient specimens to establish or verify reference
intervals. If a laboratory wishes to transfer a reference interval established by another laboratory
or publication, the acceptability should be assessed based on several factors: similarity of
geographies and demographics, similarity of test methodology, sound clinical judgment and
consultation with local medical professionals. Approval by the laboratory medical director is
required and must be documented. Using the slope and intercept obtained from the accuracy
experiment, and the Lower and Upper Reference range from the previously validated method,
using the Y= mx+b equation, the new upper and lower ranges may be derived.
The BRI for the new method will be 14.5 to 51.0 by transference method. However, it is not
advised to do it more than once that is, for one change with reference to one previous method.
An ideal Thromboplastin will be the same as the standard PT reagent established by WHO.
Since in real practice this is not possible 2 corrective steps are undertaken.
2. INR or International Normalized Ratio: Every lot of thromboplastin is also required to have
a population mean from the normal population. For this an estimation of MNPT or Mean
PY
Normal Prothrombin Time is required. A laboratory can estimate the MNPT from a
minimum of 20 healthy individuals with a relatively equal mix of both sexes over a range of
O
age groups. (Avoid people on anticoagulants, pregnant women, and people with known
bleeding tendencies). Estimation of a geometric mean is to be preferred to the arithmetic
C
mean. MNPT samples must be fresh. The mean of a laboratory normal control is not an
acceptable substitute for the MNPT, since control samples may differ excessively from each
T
other, particularly in the case of less responsive reagents. The MNPT should be determined
AF
Using MNPT data to define Biological Reference Range. The reference interval is calculated
by determining the 95% Confidence interval of a group of normal donors. Ideally a number
closer to 120 is required. However, the same group that was used for MNPT will serve as the
pool for determination of reference interval.
a) Look at the individual PT result
b) Calculate mean and +/- 2 SD range
c) Exclude all those outside 2 SD
d) Now recalculate Mean +/-2 SD
e) This is the ref interval.
f) This reference interval is used in the reports
g) For good thromboplastins the reference interval falls between 10-13 secs
Run any sample with high values 3 times consecutively followed by any sample with low
values 3 times consecutively and using the formula given below calculate the carryover%.
Alternatively any sample 2 times followed by 3 runs of cell pack and apply the following formula
Maximum allowable carryover % is WBC <2%, RBC < 1%, HB <2%, and Platelets<2%
PY
validation summary report with approval of the lab director authorizing the introduction into
routine service. A sample method evaluation summary is given as annexure
It is advisable to start with linearity, then precision, accuracy and finally reference range
O
verification/establishment/transference. The sensitivity (LOD) and specificity (Interferences)
C
specified by the manufacturer maybe used. The carryover exercise maybe carried out
periodically, say once in 6 months.
T
AF
PY
CONTINUAL
O
C
IMPROVEMENT
T
AF
R
D
96
CHAPTER 5: GENERAL CONCEPTS IN
QUALITY ASSURANCE
“ Learning Objectives
At the end of this chapter the learners will be able to understand the
The concepts in process control going beyond the testing areas
Some management tools that can be used within the labs to increase
efficiency, detect errors and minimize risks.
5.1 Introduction
PY
There are many process control techniques that come as handy tools to increase the
efficiency of a lab and reduce the risk to results, staff and environment. Every technique or
tool is unique and has its strength to give output. The most critical point is the selection of
O
techniques best suited for that particular objective as not all techniques can be used
C
everywhere. There are overlapping among the tools and the lab may decide on using which
tool and where.
T
This chapter will help the readers in getting ideas about the following process control techniques
AF
a. PDCA
b. 5s
R
c. Trend Analysis
d. Root Cause Analysis
D
e. FMEA
f. Pareto Analysis
g. Value Stream Mapping
Walter Shewhart
Discussed the concept of the continuous improvement cycle (Plan Do Check Act) in his 1939
book, "Statistical Method from the Viewpoint of Quality Control.
W. Edwards Deming
Modified and popularized the Shewart cycle (PDCA) to what is now referred to as the Deming
Cycle (Plan, Do, Study, Act).
PDCA Process
How to use
Component Approach
What? How?
• Identify the problem to • Brainstorm potential • Direct observation of
be examined causes for the problem process
• Formulate a specific • Divide overall system • Process mapping
problem statement to into individual processes • Flowcharting
clearly define the problem -map the process
• Cause and Effect
• Set measurable and • Collect and analyze data diagrams
P
attainable goals to validate the root cause
• Pareto analysis
• Identify stakeholders and • Formulate a hypothesis
PY
develop necessary • Verify or revise the
communication channels original problem
to communicate and statement
gain approval
O
• Establish experimental
C
success criteria
• Design experiment to
D Develop Solutions
T
• Implement the
R
Process to remember
PY
• The PDCA cycle can be an effective and rapid method for implementing continuous
improvement.
• Each step: Plan, Do, Check, and Act are critical for consistent implementation of
O
successful process improvements.
C
• Different organizations will use the cycle uniquely, but organizations that use it well
AF
5.3 The 5S
D
5S was developed in Japan and was identified as one of the techniques that enabled Just in
Time (JIT) manufacturing, aimed at reducing turnaround time.
The goal of 5S is to create a work environment that is clean and well-organized. It consists of
five elements:
Sort (eliminate anything that is not truly needed in the work area)
Set in Order (organize the remaining items)
Shine (clean and inspect the work area)
Standardize (create standards for performing the above three activities)
Sustain (ensure the standards are regularly applied)
It should be reasonably intuitive how 5S creates a foundation for well-running equipment. For
example, in a clean and well-organized work environment, tools and parts are much easier to
find, and it is much easier to spot emerging issues such as uid leaks, material spills, metal
shavings from unexpected wear, hairline cracks in mechanisms, etc.
Set
• Arrange all necessary items so that they can be easily selected for use
• Ensure first-come-first-served basis
• Make workow smooth and easy
Shine
PY
• Clean your workplace completely
• Prevent machinery and equipment deterioration
• Keep workplace safe and easy to work
O
• Keep workplace clean and pleasing to work in
C
• Must be able to detect problems in 5 seconds within 50 feet.
T
Standardize
AF
Sustain
• To keep in proper working order
• Also translates as "do without
being told” Figure79: Diagrammatic representation of 5S
PY
• Failure effects (What would be the consequences of each failure?)
Teams use FMEA to evaluate processes for possible failures and to prevent them by
correcting the processes proactively rather than reacting to adverse events after failures
O
have occurred. This emphasis on prevention may reduce risk of harm to samples, patients
C
and staff. FMEA is particularly useful in evaluating a new process prior to implementation and
in assessing the impact of a proposed change to an existing process.
T
Failure Modes and Effects Analysis (FMEA) was developed outside of health care and is now
AF
being used in health care to assess risk of failure and harm in processes and to identify the
most important areas for process improvements.
R
Following the thoughts above, it is clear that a needle stick injury or spillage is self-evident,
easily detected, reported and gets a higher score for Det. However, the severity (Sev) is
RPN =
Process Occurrence Detection Responsibility
Severity (Occ*Det* Action
Mode 1-10 1-10
Sev)
Needle Training, PEP
3 9 10 270 HOD, QM
stick
Training,
Spillage 2 8 8 128 HOD, QM
Engineering Controls
Training,
Hemolysis 7 3 8 168 Adequate Phlebotomy QM
equipment
Wrong
2 7 8 132 Training QM
Container
Inadequate
Volume
1 3 6
PY
18
Training,
Volume Checks
QM
O
Equipment Maintenance,
Micro clots 8 5 8 320 QM
Training
C
XYZ 2 1 3 6 ABC Senior Technician
T
The Detection (Det.) is deleted in many analysis (see below) as it may bring down the RPN
spuriously. Only Occurrence and Severity are considered. Not being able to detect the risk
AF
PY
of an event is appropriate when the degree of importance is the same for all categories and
when the potential for occurrence is the same for all categories. When the frequency
O
approach is not appropriate, the procedure to be used depends on which of these two
conditions is not satisfied.
C
• When there are many problems or causes and you want to focus on the most significant.
• When analyzing broad causes by looking at their specific components.
R
PY
- Lack of regular preventive maintenance
- Environmental factors like dust
- Inadequate calibration
O
- Poor Handling, like spills
C
- Electricity Fluctuations
The pareto analysis (as shown in the chart) will help us to understand which reason needs to
T
be addressed first. In the example below, if we address the major reason i.e. lack of regular
AF
Pareto chart can be used anywhere in the laboratory to prioritize the incidents and address
them. Data serves as the key factor in this.
Critical decisions on lab activities sometimes are based trends, which often are presented
without a statistical analysis. Those responsible for decision making may be left wondering
whether these apparent trends represent only chance variation. Trend analysis is based on
the idea that what has happened in the past will happen in the future.
PY
Application of Trend analysis in laboratory, single analyte
O
C
T
AF
R
D
Figure 83: Graphical representation of Trend Analysis of single parameter over a period of one year
12
10
Jan
8
Fab
6 Mar
4 Apr
0
Glucose Urea Creatinine Cholesterol
14
12
PY
10
8 Glucose
O
Urea
6
C
Creatinine
4 Cholesterol
T
2
AF
0
Jan Feb Mar Apr
R
5.7 Root cause analysis (RCA) & Cause & Effect Analysis
• Root Cause Analysis (RCA) is a structured
method used to analyze incidents and
adverse events. Initially developed to
analyze industrial accidents, RCA is now
widely deployed as an error analysis tool in
health care.
• A root cause is an initiating cause of either a
condition or a causal chain that leads to an
outcome or effect of interest. Commonly,
root cause is used to describe the depth in
the causal chain where an intervention
could reasonably be implemented to
improve performance or prevent an
undesirable outcome.
Figure 85: Fishbone diagram
PY
In India, one of the causes for recurrent equipment breakdown is dust and lack of
proper maintenance.
O
C
T
• To identify the factors that resulted in the nature, the magnitude, the location, and the
timing of the harmful outcomes (consequences) of one or more past events; to determine
what behaviors, actions, inactions, or conditions need to be changed; to prevent
R
recurrence of similar harmful outcomes; and to identify lessons that may promote the
D
• There may be more than one root cause for an event or a problem, wherefore the difficult
part is demonstrating the persistence and sustaining the effort required to determine
them.
• The root causes identified will depend on the way in which the problem or event is
defined. Effective problem statements and event descriptions (as failures, for example)
are helpful and usually required to ensure the execution of appropriate analyses.
People Methods
Corrective
Problem
Actions
PY
Four Major Steps in RCA
The RCA is a four-step process involving the following:
1. Data collection.
O
2. Causal factor charting
C
3. Root cause identification.
4. Recommendation generation and implementation.
T
AF
accomplished and to move people and products from place to place), waiting, over-
processing (doing more activities than is necessary to complete a piece of work), inventory
issues (obsolete, duplicated, unnecessary, or missed items), defects (errors) and
overproduction (an example, redundant paperwork). All these wasteful activities can occur
along the sample path in a lab.
A proper Value Stream Mapping along the sample path creates value, eliminates waste,
reduces lead time and in turn reduces, total costs. The following are a few examples of the
results of a VSM in a lab, increasing productivity
Reducing analytical batch sizes and increasing the frequency of analyses
Middleware to interface instrumentation with the LIMS
Staggering shifts
Cross training analysts for reporting
Automation of manual analyses
So it is vital that the staff and management of a laboratories undertake VSM to enhance the
performance and avoid mistakes.
PY
O
C
T
AF
R
D
PY
Definitions, Approved Guideline 3rd Edition
7. G 104: Guide to estimation of Measurement Uncertainty In Testing, American Association for
laboratory Accreditation
O
8. Tietz Textbook of Clinical Chemistry and Molecular Diagnostics, 5th Edition
C
9. Recommended Total Allowable Error Limits, Sun Pharma Total + Allowable + Error + Limits
+ Table+Example_rev20120725%20(3).pdf
T
11. Tonk’s Rule: Establishing Performance Standards, A Practical Approach, David G Rhoads
12. CLIA Proficiency Testing Criteria for Acceptable PerformanceCLIAC MeetingSeptember 1,
2010, Rex Astles, PhD, DABCC, FACB, Laboratory Practice Standards Branch, Division of
R
13. Sigma Metrics in Clinical Laboratories, From Theory to Practice, Dr Dana Baily, University Of
Toronto, Gamma DynaCare
14. Bull’s Algorithm: Quality Control in Clinical Laboratories, Petros Karkalousos1 and Angelos
Evangelopoulos, Technological Institute of Athens, Faculty of Health and Caring
Professions, Department of Medical Laboratories Lab Organization & Quality Control dept,
Roche Diagnostics (Hellas) S.A. Athens, Greece
15. Automated Hematology Analyzer, XS series, XS-1000i/XS-800i, Instructions for Use
16. NABL 112 Specific Criteria for Accreditation of Medical Laboratories, 4th Issue, 2016
PY
Chapter 5:General Concepts in Quality Assurance
1. Dennis, Pascal. Lean Production Simplified: A Plain Language Guide to the World’s Most
Powerful Production Systems. Productivity Press, 2002
O
2. http://www.balancedscorecard.org/bkgd/
C
3. http://www.hci.com.au/hcisite2/toolkit/
T
4. http://www.isixsigma.com/
AF
5. RISK AND THE MEDICAL LABORATORY Michael A Noble MD FRCPC, Chair, Program Office
for Laboratory Quality Management, University of British Columbia - Vancouver BC
6. Risk Management in the Medical Laboratory: Reducing Risk through Application of
R
Standards Michael A Noble MD FRCPC, Chair, Program Office for Laboratory Quality
D
PY
Algorithm :
other problem-solving operations, especially by a computer
Solutions with specified defined concentrations that are
O
used to set or calibrate an instrument, kit or system before
Calibrators :
testing is begun. Calibrators are often provided by the
C
manufacturer of an instrument.
The discrete amount of reagent or analyte carried by the
T
PY
defined period of time. Also called obtained/lab mean.
An ongoing process whereby the system is checked for
Performance Evaluation :
fitness for use.
O
Closeness of agreement between quantity values
C
Precision : obtained by replicate measurements of a quantity, under
specified conditions. See Quantitative examination.
T
PY
the ordering physician.
Confirmation, through provision of objective evidence, that
Validation : the requirements for a specific intended use or application
O
have been fulfilled.
C
Values of analytes which is significant clinically. May be
high, low or normal. Other terms used are Medical
Medical Decision Points :
Decision Values (MDV), Clinical Decision points (CDP),
T
BV : Biological Variations
CV
CVI
:
:
PY
Coefficient of Variation
LJ : Levey Jennings
ME : Method Evaluation
MU : Measurement Uncertainty
PT : Prothrombin Time
PT : Proficiency Testing
QC : quality control
PY
RCA : Root Cause Analysis
SD : Standard Deviation
T
SE : Systematic Error
R
TE : Total Error
TEa : Total Allowable Error (Also called ATE; Allowable Total Error)
Annexure 2
A. BV Desirables
B. CLIA Limits
PY
O
C. Recommended TEa Limits (Sun Diagnostic)
C
B. Sigma-Metrics QC Selection
Tool for 3 Levels Control
Annexure 8 Worksheets
118
Job-Aids Annexure 1
PY
O
C
T
AF
R
D
PY
O
C
T
AF
R
D
PY
O
C
T
AF
R
D
PY
a. Choose the appropriate Sigma-metrics QC Selection Tool for the number of controls used
for the test.
O
b. Locate the Sigma-metric value on the Sigma-scale (scale at the top of the X-axis).
c. Validate the Sigma-metric against the SEc scale (scale at the bottom of the X-axis).
C
d. Draw a vertical line from the Sigma-metric value to the SEc value.
e. Assess probability of error rejection where the Sigma line intersects with the QC rule
T
power curve.
AF
h. Select the appropriate QC rule and total number of control measurements (N) that
D
6. On-going monitoring of QC
a. Create the QC chart.
b. Determine how often a supervisor will review the QC chart, depending on the SEc or
Sigma-metric.
c. Initiate corrective action if SEc and Sigma are low.
d. Develop a standardized process to investigate QC rule violations from daily, summary,
and peer-reviewed QC data.
e. Monitor the accuracy, precision, SEc, and Sigma at least on a monthly basis.
f. Take corrective actions as needed; continue to target poorly-performing analytical systems.
Pre-analytical
Note the date of receipt for your shipment
Immediately inspect and reconcile the contents of your shipment with the
accompanying paperwork
Are all required specimens available?
Is the quality and appearance of the specimens acceptable?
Store the shipment properly
Note due date of results
Reconstitute specimens with volumetric pipettes and correct diluent
Mix samples well before analyzing
Analytical
PY
O
Analyze specimens at correct temperature. If shipment was stored in the refrigerator,
C
specimens may need to come to room temperature before testing.
Always refer to your survey instructions for storage and specimen handling.
T
Do not refer any PT samples to another laboratory, even if your instrument is non-
functioning or is part of your testing algorithm.
R
Rotate testing responsibility for PT specimens between all laboratory personnel that are
routinely performing the analysis in your laboratory.
D
Post-Analytical
Assure that your laboratory’s results are reported according to the PT provider’s instructions.
Ensure the proper method and instrument code are recorded for each test so that you are
part of the correct peer group.
If test not performed is the correct answer because of equipment issues, then indicate this
on the form.
If the result obtained requires additional testing per your laboratory’s algorithm, then
indicate on the form to be sent to a reference laboratory or further testing required, but do
not actually send the PT sample to another laboratory.
Review results for clerical errors on answer sheet, including decimal point placement.
If you use the PT sample materials to cross-check other instrument or methods, or as part
of your competency training program, then be absolutely sure the PT results are
submitted to the PT provider before starting these activities.
Receipt of Results
Have the Laboratory Director and Supervisor review, and sign and date results.
Review results with testing personnel. Retain a copy for competency assessment and
place into personnel record.
Investigate any failed responses and complete an EQA Failure Checklist assessment.
PY
O
C
T
AF
R
D
PY
O
C
T
AF
R
D
PY
O
C
T
AF
R
D
Clinical Decision levels for Electrolytes, Metabolites, Proteins and Enzymes, Hormones,
Hematology related tests and Drugs are available. Electrolytes are shown as an example here
PY
O
C
T
AF
R
D
Sigma-Metrics QC Selection
Tools for 2 & 3 Levels Control
PY
O
C
T
AF
R
D
PY
O
C
T
AF
R
D
Name of
Scope Frequency Link
the EQAS
• Chemistry program I (QCH I) *External Quality http://home.cmcvellor
Assurance Scheme e.ac.in/clinqc/aboutR
CMC • Chemistry program II (QCH II)
[EQAS] begins in egistration.aspx
Biochemistry • Thyroid Hormones & Cortisol (QT&C) January.
EQAS • HbA1c (not suitable for Nycocard *Twelve lyophilized
method) (QGHB) human sera / whole
• Reproductive Hormones (QRPH) blood samples in
• Biochemical Markers for Down’s batches of four, once
PY
Screening (QDS) every four months
• Urine Chemistry (QUC)
Randox EQAS RIQAS covers 360 parameters across 32 Frequency depends http://www.randox.co
(Called RIAQS) exible multi-parameter programs. upon on the type of the m/wp-
D
Bio-Rad • Blood Gas Program (12-month cycle) Biorad follows monthly http://www.bio-
cycle for EQAS rad.com/en-
• Blood Typing Program (3 samples tested
program in/category/external-
every 4 months)
quality-assurance-
• Cardiac Markers Program (12-month cycle) services-eqas
• Clinical Chemistry (Monthly) Program
(12-month cycle)
• Coagulation Program (12-month cycle)
• Ethanol/Ammonia Program (12-month
cycle)
PY
Indian Academy A set of slides [gynecological (cervical Pap smears) and non- http://www.cytoindia.
of Cytologists gynecological, FNAC and exfoliative cytology (uid) smears) are com/Aboutcytoind/pr
External Quality dispatched to the first laboratory in four groups for onward circulation. esidents.htm
Assurance
O
Programme
C
which is quarterly
• Hematology (16 parameters) – Monthly, but available only for
Bangalore local labs
R
Immunohistoche Two modules are being Four markers are offered in each www.QcMark.org
mistry ILQA offered: General module for of the three runs in a cycle (year),
program assorted markers and Breast so covering total 12 markers in a
Conducted by module for ER, PR and Her-2 year for general module. The
QcMark testing. breast module repeats ER, PR and
Her in every run (each marker gets
tested thrice in a year).
PY
Chandigarh
IATP External It assesses three major aspects of parasitic diagnosis namely http://iatp.in/
O
Quality
1) Microscopy 2) Serology 3) Molecular biology.
Assurance in
Parasitic
C
Diagnosis
through
JIPMER,
T
Puducherry
AF
EQAS under EQA of the NRLs will be conducted by WHO Supra-National Reference
RNTCP Laboratories. Proficiency testing of DST by the Culture and DST
laboratories is conducted at the time of accreditation by the respective
designated NRL.
The Culture and DST laboratories should send a list of all cultures to
NRLs, who would randomly select ten cultures for proficiency testing.
These cultures would be then sent to NRLs by 37 Culture and DST
laboratories and the result of NRLs will be communicated to the
laboratories with corrective actions, if required.
In addition, NRLs will send a set of 20 cultures to the laboratories at the
time of accreditation and annually thereafter, and the results will be
compared and suggestions for improvement would be provided, if
required.
PY
O
C
T
AF
R
D
QC Level:
PY
Rule/Rules Violated
Check Storage/Expiry of
O
Reagent
C
Calibrator
QC
T
Check Environment
AF
Temperature
Humidity
R
Check Operator
D
Comments
Signature of Technician
Assessment Review
PT Report Reviewed for Clerical Errors:
Evaluation results match your copy of submitted results Yes No N/A
Wrong Data Entered Yes No N/A
Wrong Units Reported Yes No N/A
Incorrect instrument or methodology indicated Yes No N/A
Sample Handling:
Unexpected delays in receiving survey
Kit contents correct and in acceptable condition
PY
Testing performed within suggested instructional time guidelines
Yes
Yes
Yes
No
No
No
N/A
N/A
N/A
O
Specimens stored at correct temperature between receipt and analysis Yes No N/A
C
Specimen analyzed at correct temperature Yes No N/A
Sample mixed properly before testing Yes No N/A
Sample diluted properly Yes No N/A
T
Testing Procedure:
Testing Personnel competent to perform analysis Yes No N/A
R
Sample Results:
A single sample fails on several analytes Yes No N/A
All samples failed for the analyte Yes No N/A
Previous survey results for the analyte demonstrate a problem emerging Yes No N/A
PT material reassayed Yes No N/A
Investigation:
PY
O
C
Conclusion:
T
AF
Equipment/Process:
Serial Number/ Equipment ID: Reference
Serial Number/ Equipment ID: Test
Date:
FDA Approval Status: Approved / not approved
Procedure:
Ref to Lab QSP: Method Evaluation…..
Results:
PY
All raw data reports and statistical analysis details can be found in the file numbers
O
1. Precision – refer to file number
C
Analyte:
T
AF
Analyte :
Results
a) r value
b) Slope
c) Intercept
PY
O
3. Linearity: refer to file number
C
d) Linearity
R
e) AMR
D
f) CRR
Icterus –
Hemolysis –
Lipemia –
Drugs –
Acceptability of Method
PY
O
1. Manufacturer’s claims for linearity, precision and accuracy have been verified
C
2. The Sigma-metric is
T
Method Approval
R
A. 2,2,2,2,42,2,2,2,2,2,2
B. 9, 2,3,4,11,5,8,6,7,5
C. 6,6,6,6,6,6,6,6,6,6,6
PY
Data set A: Mean 90, SD 3.2
Assign the graph with +_3SD numbers & Plot the data on the graph: Is it Gaussian?
O
* 93, 84,90,93,88,86,88,95,92,94,88,90,89,87,91,90,94,88,97,90,91,95,90,85,91,94,89.91,85,89
C
T
+3s
AF
+2s
+1s
R
D
-1s
-2s
-3s
Assign the graph with +_3SD numbers & Plot the data on the graph: Is it Gaussian?
45,48,41,49,102,44,43,141,44,46,43,43,45,49,41,42,40,43,48,43
+2s
+1s
-1s
-2s
-3s
PY
- 2.13, 2.09, 2.10, 2.11, 2.15
- 36.83, 35.79, 37.01, 35.72, 36.29, 36.33, 36.54, 36.48, 36.91, 35.87
O
Exercise 4. LJ Plotting with two levels of QC
C
Plot the LJ with given values:
Following are the data points for Level 1 QC of AST for the month of September 2016. Please
T
define mean, SD (3SD), range and plot the values on the graph.
AF
Data Set A:
R
D
Data Set B:
Following are the data points for Level II QC of AST for the month
Data Set B:
Following are the data points for Level II QC of AST for the month of September 2016. Please define
mean, SD (3SD), range and plot the values on the graph.
PY
O
C
T
AF
R
Graph B:
Lab XYZ, Nov 2015, AST Level II QC
PY
O
C
T
AF
Graph 4
Given below are the data points for AST Level I & II for the month of January 2016.
PY
this. What actions will you take to prevent this in future.
O
87
82
C
77
T
72
AF
67
62
R
57
D
Error:
Possible reasons:
Corrective Actions:
Preventive Actions:
87
82
77
72
67
62
PY
O
57
C
T
AF
Error:
D
Possible reasons:
Corrective Actions:
Preventive Actions:
Mean
SD
CV%:
Data Set B:
210 205 203 204 203 198 199 201 203 205 210 204 205
201 205 200 195 197 203 205 198 198 199 200 202
PY
203 205 207 208 201
Mean
O
SD
CV%:
C
T
Scenario A: You have a new lot of QC no 12345. For AST Level II, the manufacturer’s mean is 220
IU/L and range is 190-250 IU/L. You have done parallel testing and got these values. Plot your
lab’s chart for Lot No. 12345 for AST, before you would assign a new range and new mean.
R
210 205 203 204 203 198 199 201 203 205 210 204 205
D
201 205 200 195 197 203 205 198 198 199 200 202
203 205 207 208 201
What will be the Lab assigned mean and range?
Manufacturer’s mean: 220 IU/L Lab Mean
Manufacturer’s Range: 19-250 IU/L Lab Range
+3s
+2s
+1s
X
-1s
-2s
-3s
PY
O
What will be the Lab assigned mean and range?
C
Manufacturer’s mean: 220 IU/L Lab Mean ______________
Manufacturer’s Range: 19-250 IU/L Lab Range ______________
T
AF
correct and others are wrong (marked accordingly). Identify the problem in the charts and the
consequences of using wrong charts. Specific inputs are to be given for the circled data points.
D
PY
O
C
T
AF
R
D
Glucose AST
Lab Mean 95 203
Peer group Mean 90 197
Bias
Absolute Bias
% Bias
Glucose AST
PY
O
Lab Mean 95 203
Peer group Mean 90 197
C
SD 4 6
T
% CV
AF
Absolute Bias
% Bias
R
TE
D
%TE
Exercise 12: Total Allowable error and judging acceptability of the analyte performance
Find the TEA using CLIA proficiency limits from annexure and compare with the total error in the
above cases and judge acceptability of the analyte performance.
Glucose AST
%TE
% TEA from CLIA
Judging Acceptability
Glucose AST
Lab Mean 95 203
Peer group Mean 90 197
Bias
Absolute Bias
% Bias
SD
%CV
TE
%TE
% TEA
PY
Sigma
Sec
Judging
O
Acceptability
C
Using the data from the exercises 10 to 14, and by using the sigma scale tool (given in
AF
annexure), decide the QC rules to be followed for each of the analytes in your lab.
R
Graph .2
PY
O
C
T
These numbers will not form a Gaussian pattern. A -2SD is a negative number. The mean
AF
Exercise 3
D
Data Set A B C
Mean 5.24 2.1 36.38
SD 0.23 0.02 0.47
Upper End 5.92 2.19 37.78
Lower End 4.56 2.04 34.97
Exercise 4
Graph 2
PY
Graph 3
Graph 4
AF
Exercise 6
LJ Data Set A
Assigned SD 5 5
Exercise 7:
T
CV % 7.2 1.8
D
Exercise 8:
Data Set A:
Mean 202.6
Range 191.5-213.7
SD 3.7
Current Lot CV 4
New Lot Mean 202
New Lot SD 8.1
PY
New Range 178-226
O
Exercise 9:
C
PY
Sigma 1.1 5.7
SEc - 4.1
O
Judging Acceptability Not Acceptable Good Performance
Rule Selection Change Method Single Rule
C
T
AF
R
D