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Stereo Notes

This chapter discusses stereochemistry, including different types of isomers such as enantiomers and diastereomers. It defines chirality as handedness and discusses how to determine if a molecule is chiral using the CIP rules to assign R/S configurations. It also covers properties of enantiomers like how they can have different interactions with polarized light but identical physical properties. The chapter discusses how to separate enantiomers and examples of other chiral compounds and stereochemistry in reactions.

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Sankar Adhikari
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0% found this document useful (0 votes)
174 views

Stereo Notes

This chapter discusses stereochemistry, including different types of isomers such as enantiomers and diastereomers. It defines chirality as handedness and discusses how to determine if a molecule is chiral using the CIP rules to assign R/S configurations. It also covers properties of enantiomers like how they can have different interactions with polarized light but identical physical properties. The chapter discusses how to separate enantiomers and examples of other chiral compounds and stereochemistry in reactions.

Uploaded by

Sankar Adhikari
Copyright
© © All Rights Reserved
Available Formats
Download as PDF, TXT or read online on Scribd
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Chapter 5

Stereochemistry

Chirality and isomers


Stereoselectivity of reactions
Isomers Ch 5 #2

configurational
isomers

geometric isomers (optical isomers)


Chirality = handedness Ch 5 #3

 chiral object or molecule has


 non-superimposable mirror image
 asymmetric center

 achiral object or molecule has plane of symmetry


Br

C
H
H3CH2C
H
Ch 5 #4

 chiral? achiral? Find


 asymmetric center [= C with 4 different groups]  chiral
 plane of symmetry  achiral ~ always true

not always
true

Me
Me
Me

O O Me Et Me Et

Cl Cl Cl Br
Asymmetric center Ch 5 #5

 atom bonded to 4 different groups


= asymmetric carbon = chiral(ity) center = chiral carbon

 stereocenter and asymmetric center


Enantiomer(s) Ch 5 #6

enantiomer(s)

 Fischer projection
 Horizontal bonds project above the paper;
vertical bonds projects behind the paper.
 Usually, C-C vertical, subs horizontal
CH3 CH3

Br H H Br

CH2CH3 CH2CH3
R,S designation of enantiomers Ch 5 #7

1. Find the asymmetric center.


2. Assign priority of the groups (1, 2 , 3, 4).
 Using Cahn-Ingold-Prelog rules
3. View from asymmetric center to group 4.
4. Determine the direction from group 1 to 2.
 Clockwise ~ (R)
 Counterclockwise ~ (S) 1 2
4 4

R ~ rectus [‘right’]
3 2 3 1
S ~ sinister [‘left’]
‘R for right-turn’ (S)
(R)
Ch 5 #8

 Practice!

1
2 OH
OMe H Ph
H
3 Et C 4
Cl
Me 1
4

OH

C
Cl Et
Me
Ch 5 #9

 R,S in Fischer projection

Cl Cl
Et Pr Pr Et

H H

Me Me

H OH HO H

Et Et
Properties of enantiomers Ch 5 #10

 For an enantiomeric pair:


 properties that are not chiral are the same
 properties observed in achiral environment
 mp, bp, ∆Hcombustion,
 solubility to achiral solvent, reactivity to achiral comp’d
 properties that are chiral are different hand
 properties observed in chiral environment mitten
glove
 solubility to chiral solvent
 reactivity with an enantiomer of a chiral comp’d
 odor, drug [medicine]
 optical rotation
Optical activity Ch 5 #11

 Chiral compounds are optically active, and rotate plane-


polarized light.

 clockwise rotation ~ dextrorotatory ~ (+) or (d)


 counterclockwise rotation ~ levorotatory ~ (–) or (l)
 no rotation ~ not optically active [achiral] or racemic
 racemate [racemic mixture] ~ 50/50 mixture of (+) and (–)
 (±) or (d,l) D/L ~ for carbohydrates

 relation between R/S and +/–? NO relation!


 Observed rotation indicates only chirality and existence or
excess of one enantiomer.
Ch 5 #12

 specific rotation

 T ~ temperature (°C)
 λ ~ wavelength (usually, D ~ sodium D-line, 589 nm)
 α ~ observed raotation (degree)
 l ~ length of sample tube (dm = 10 cm)
 c ~ concentration (g/mL)
 specific rotation for
one enantiomer
 not for racemate
 enantiomeric excess [ee]
 ee = observed [α] / [α] of pure enantiomer (%)
 If [α] = 2.875 observed, ee = 50%. (50+25)% R + 25% S.
More than 1 asymmetric center Ch 5 #13

 # of stereoisomers
 for molecules with n asymmetric centers [C*]
 maximum number of stereoisomers = 2n
 with 2 C*’s
* *
 4 stereoisomers
RR SS
OH

enantiomers
RS SR diastereomers
 2 enantiomers + 2 diastereomers
 for 1 isomer, 1 enantiomer + 2 diastereomers
 with n C*’s
 for 1 isomer, 1 enantiomer and 2n – 2 diastereomers
Ch 5 #14

 Diastereomers are stereoisomers that are not enantiomers.


 enantiomers ~ same achiral properties (mp, bp, ---)
different chiral properties (+/– optical rotation)
 diastereomers ~ different chiral and achiral properties
 Cis-trans isomers are diastereomers.
Ch 5 #15

 erythro ~ similar group on the same side


 threo ~ on opposite sides in Fischer projection (eclipsed!)
Ch 5 #16

Br CH3 Br CH3

H3C CH3 H3C CH3 H3C CH3 H3C CH3


Meso compound Ch 5 #17

2 C*’s, only 3 stereoisomers


(1 meso and its 2 diastereomers)

Br CH3
H
C C
H
H3C Br

CH3
Br H
Br H
CH3

 meso compound [meso-stereoisomer]


 superimposable mirror image ~ achiral
 The 2 C*’s are bonded to the same 4 groups.
Ch 5 #18

 Me2-cp

H3C
=
CH3 H3C CH3 H3C CH3 H3C CH3

 Br2-cx

Still, achiral and meso


R,S for diastereomers Ch 5 #19

(2S,3R) =
Absolute and relative configurations Ch 5 #20

 absolute config ~ R or S
 relative config ~ changed or not [the same or different]
 the same relative config  not breaking bond to C*

absolute config also the same

absolute config changed

 relative config may change  breaking bond to C*


Separation of enantiomers Ch 5 #21

 difficult, tedious, and costly


(1) converting to diastereomers
-
(R)-RCOO (R)-R’NH + 3
+ mixture of
(R)-R’NH2 -
(S)-RCOO (R)-R’NH3+
diastereomers (R)-RCOOH
+
(R)-RCOOH (S)-RCOOH
+ separation by
-
(R)-RCOO (R)-R’NH3+
(S)-RCOOH chromatography
or recrystallization +
racemate -
(S)-RCOO (R)-R’NH3+
HCl

(2) selectively reacting one enantiomer with


chiral reagent and/or chiral catalyst
(3) chromatography with chiral stationary phase
Other chiral compounds Ch 5 #22

 other tetrahedral comp’ds

 pyramidal comp’ds
 not separable

 separable
Ch 5 #23

 substituted allenes
Ch 5 #24

 substituted biphenyls

 rings perpendicular ~ no plane of symmetry


 helical molecules

[α] = 3640
 right-handed and left-handed
Stereochemistry of reactions Ch 5 #25

 regioselectivity

 eg, Markovnikov addition


 if completely regioselective ~ regiospecific
 stereoselectivity

 moderately, highly, completely


 stereospecificity

 All stereospecific reactions are stereoselective. Not vice versa.


Addition rxn creating 1 C* Ch 5 #26

 reactant with no C*

 gives racemate

enantiomers

 = not stereoselective
 not stereospecific ~ both cis- and trans- gives racemate
Ch 5 #27

 reactant with C*

 gives racemate?
 R  RS + RR

 stereoselective
 diastereomers ~ RS > RR or RS < RR
 stereospecific
 S  SR + SS
Addition creating 2 C*’s Ch 5 #28

 through C+ intermediate

 gives 4 stereoisomers

 RR, RS, SS, SR


 not stereoselective and not specific
Ch 5 #29

 catalytic addition
 ‘syn’ addition

 cis-isomer  erythro enantiomers

 symmetric cis  meso compound


Ch 5 #30

 trans-isomer  threo enantiomers

 cycloalkenes  cis or meso


Ch 5 #31

 peroxyacid addition
 syn addition  ‘concerted’
 cis to cis or meso
 trans to trans
Ch 5 #32

 Hydroboration-oxidation
 syn addition  ‘concerted’
 stereoselective
 stereospecific
Ch 5 #33

 halogenation, halohydrin formation


 ‘anti’ addition
 through cyclic intermediate
 cis  threo
 trans  erythro or meso
Ch 5 #34
Summary of addition reactions Ch 5 #35

 through C+ interm
 hydrohalogenation, hydration
 regioselective to specific
 not stereoselective or specific
 through 3-membered cyclic interm
 halogenation, halohydrin, oxymercuration-reduction
 regiospecific
 stereoselective and specific (anti addition)
 concerted addition
 epoxydation, hydroboration-reduction
 regiospecific
 stereoselective and specific (syn addition)
 catalytic hydrogenation
 stereoselective and specific (syn addition)
Chiral catalyst Ch 5 #36

 enzyme ~ protein catalyst for bio-reaction


 (completely) stereoselective

S only, no R

 stereospecific

 other chiral catalyst


Chiral reagents Ch 5 #37

 enzyme

‘lock-and-key’

 receptor
 smells
 drugs

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