BIOIMG101x
INTRODUCTION
TO
BIOMEDICAL
IMAGING
Course
Syllabus
____________________________________
Table
of
Contents
Contents
1.0
What
is
this
Biomedical
Imaging
course
about?
2.0
Who
is
the
audience
for
this
course?
3.0
What
are
the
expected
learning
outcomes?
4.0
What
is
the
learning
pathway
for
the
course?
5.0
How
is
the
course
content
organised?
6.0
Approximately
how
long
will
it
take
to
complete
the
course?
7.0
How
do
I
navigate
through
the
course?
1.0 What
is
this
Biomedical
Imaging
course
about?
Imaging
technologies
form
a
significant
component
of
the
health
budgets
of
all
developed
economies,
and
most
people
need
advanced
imaging
at
some
stage
during
their
life.
All
of
us
are
aware
of
the
misinformation
sometimes
portrayed
in
TV
dramas,
which
either
exaggerates
the
benefits
or
overemphasises
the
risks.
This
course
will
provide
an
introduction
to
the
physics
and
engineering
of
modern
imaging
modalities.
It
will
introduce
some
of
the
key
applications
in
neurological
disease,
degenerative
disease,
reproduction
and
oncology.
The
course
will
include
modules
that
will
be
of
interest
to
the
general
public,
whilst
also
providing
some
advanced
modules
which
will
contribute
to
professional
development
in
health,
engineering
and
the
IT
industry.
2.0
Who
is
the
audience
for
this
course?
This
course
is
designed
with
two
audiences
in
mind.
1. The
basic
course:
It
is
anticipated
that
this
audience
will
have
completed
secondary
schooling
(and
particularly
science
subjects)
as
some
biology,
physics
and
chemistry
concepts
are
involved.
2. The
advanced
course:
First
tertiary
year
of
applied
mathematics
or
computer
science
specialising
in
modelling
is
recommended.
Health
professionals
wishing
to
update
their
knowledge
concerning
medical
imaging
post-processing
may
wish
to
take
this
course
as
part
of
their
continuing
professional
development
program.
3.0
What
are
the
expected
learning
outcomes?
On
completion
of
the
basic
course,
you
should:
Recognise
that
there
is
a
need
for
different
imaging
modalities
Understand
the
basic
principles
of
each
modality
Understand
the
terminology
of
biomedical
imaging
Understand
the
patient
experience
and
why
things
happen
during
the
imaging
procedure
Select
the
most
suitable
modality
for
a
given
clinical
case
Provide
basic
advice
on
imaging
modalities
to
your
peers
Additionally,
the
advanced
course
will
ensure
that
you
have
a:
Basic
understanding
how
an
image
is
reconstructed
/
visualised.
OR
You
understand
the
principles
of
image
post-processing
4.0
What
is
the
learning
pathway
for
the
course?
The
following
diagram
shows
how
the
course
is
designed.
It
is
recommended
that
if
you
are
doing
the
basic
course
then
you
work
through
the
introduction,
the
basic
modules
(coloured
blue)
and
then
complete
the
case
studies
in
the
final
module.
If
you
intend
to
do
the
advanced
course,
you
are
welcome
to
complete
the
basic
course
and
then
complete
the
advanced
sections
(coloured
orange).
Alternatively,
you
can
complete
just
the
assessment
pieces
from
the
basic
course
to
test
your
understanding
of
the
topics,
and
then
complete
the
related
advanced
modules.
Courseware
Case
studies
1
week
MRI-
2
weeks
PET
&
SPECT
-
2
weeks
Advanced
PET
&
SPECT
Ultrasound
-
2
weeks
X-ray
-
1.5
week
Advanced
X-ray
Advanced
Ultrasound
CT
-
1
week
Year 15
Advanced
CT
Introduction
-
0.5
week
Year 13
Advanced
MRI
Prerequisites
5.0
How
is
the
course
content
organised?
This
course
incorporates
a
Case
Study
which
is
introduced
at
the
start
of
each
section
(an
outline
of
the
sections
and
sub-sections
is
shown
in
the
table
below).
This
case
study
follows
a
hypothetical
patient
required
to
undergo
various
imaging
modalities
for
a
medical
condition.
Following
the
case
study,
each
section
has
information
relevant
to
that
modality
divided
into
sub-section
topics
such
as
basic
scientific
principles,
hardware
and
technology
and
clinical
applications.
These
early
sub-sections
form
the
basic
course.
Each
sub-section
has
one
or
several
short
quiz/zes.
These
quizzes
do
not
contribute
to
your
final
grade,
but
let
you
know
if
you
have
understood
the
key
points.
The
final
sub-section
for
each
section
of
the
basic
course
is
a
marked
quiz
on
that
topic.
The
advanced
sub-section
is
then
presented
just
after
the
assessment
item,
for
each
section.
Finally,
a
discussion
forum
has
been
integrated
at
the
end
of
each
section.
This
table
provides
a
summary
of
the
course
sections
and
sub-sections.
Week
Section
1.
1
and
2
3.
Sub-sections
Introduction
to
biomedical
imaging
Welcome
to
the
course
Survey
How
to
use
this
course
Myth
busting
Can
you
guess
what
is
imaged?
The
need
of
Multimodality
Case
study
Meet
our
unlucky
patient
Introductory
Discussion
Episode
1:
X-rays
Case
study
Basic
scientific
principles
Technology
Contrast
Clinical
applications
Assessment
1
(18%)
Advanced:
Advanced
course
-
x-rays
Discussion
Episode
2:
Computerised
Case
study
Tomography
(CT)
Basic
scientific
principles
Technology
Contrast
Clinical
applications
5
4
and
5
Episode
3:
Ultrasound
(U/S)
6
and
7
Episode
4:
Magnetic
Resonance
Imaging
(MRI)
8
and
9
Episode
5:
PET
and
SPECT
10.
Assessment
Scenarios
(2)
Assessment
2
(18%)
Advanced:
Advanced
course
CT
Discussion
Case
study
Basic
scientific
principles
Technology
Clinical
applications
Assessment
3
(18%)
Advanced:
Advanced
course
U/S
Discussion
Case
study
Basic
principles
Nuclear
Spin
Basic
principles
the
MR
Signal
Basic
principles
Relaxation
Basic
principles
Spatial
encoding
Basic
principles
Contrast
MR
Technology
Clinical
applications
Assessment
4
(18%)
Advanced:
Advanced
course
MRI
Discussion
Basic:
Case
study
Basic
principles
SPECT
PET
Quality
control
Assessment
5
(18%)
Advanced:
Advanced
course
CT
Discussion
Final
assessment
(10%)
Note!
To
complete
the
basic
course
you
must
also
complete
the
final
section
(Week
10
Assessment
Scenarios)
which
involves
reviewing
2
case
studies/scenarios
and
answering
questions
related
to
imaging
modalities
of
relevance.
6.0
Approximately
how
long
will
it
take
to
complete
the
course?
As
you
can
see
from
the
table,
some
of
the
topics
run
across
more
than
1
week.
For
the
basic
course,
one
week
of
work
involves
approximately
2
-3
hours
of
work.
Therefore,
for
the
ultrasound
topic,
for
example,
you
will
need
to
allow
4
6
hours
to
complete.
If
you
are
doing
the
advanced
course,
estimates
for
how
long
this
will
take
will
depend
on
whether
or
not
you
also
complete
the
basic
course
content.
7.0
How
do
I
navigate
through
the
course?
When
you
first
go
to
the
course
you
will
land
in
Course
Info
area,
where
you
will
see
announcements,
course
updates
etc.
This
area
also
contains
links
to
the
syllabus
(this
document)
and
general
information
about
doing
edX
courses.
There
are
several
other
tabs
across
the
top
of
the
page:
Progress:
This
tab
shows
your
progress
and
grades
for
all
completed
sections
of
the
course.
Courseware:
This
area
holds
the
course
content
videos,
lectures,
assessments
etc.
You
should
generally
work
through
the
course
in
the
order
in
which
it
is
presented.
The
sections
are
listed
in
the
left-hand
navigation
bar
and
when
you
click
on
one
of
these
then
the
sub-sections
will
be
displayed
as
shown
here
for
the
x-ray
section.
Once
you
click
into
a
sub-section
then
each
of
these
will
consist
of
a
varying
number
of
units
(between
1
and
10).
These
are
displayed
in
the
horizontal
bar
across
the
top
of
the
screen.
7
Tip!
It
can
be
easy
to
miss
some
of
the
content
if
your
previous
experience
of
learning
platforms
uses
navigation
from
the
sidebar.
In
the
edX
environment
you
need
to
navigate
using
both
the
left
side
bar
and
the
bar
at
the
top
of
the
page.
There
is
a
video
tutorial
demonstrating
how
to
use
the
edX
platform
in
the
section
called
Introduction
to
Biomedical
Imaging.
If
you
need
additional
help,
the
edX
Demo
course
goes
into
more
depth
on
how
to
use
the
platform.
8.0
What
are
the
assessment
and
completion
requirements
for
this
course?
Basic
course:
Please
note
that
only
the
basic
course
is
evaluated,
as
follows
-
-
5
quizzes
(one
for
each
episode)
worth
18%
each.
2
assessment
scenarios
at
the
end
of
the
course
(in
week
10)
worth
5%
each.
The
pass
mark
is
50%.
In
order
to
receive
a
certificate,
all
assignments
have
to
be
completed
within
2
weeks
of
the
end
of
the
course.
The
due-by-dates
are
displayed
under
the
Assessment
sub-section
titles
on
the
left
navigation
pane.