Bacterial Transformation Lab
Bacterial Transformation Lab
BacterialTransformationLab
KaitlinSepanek
MaddieFrew,VictoriaFelder
October52015
Biology2Period2
ObservingBacterialTransformationbyGlowingandGrowingunderU.V.Lighting
withandwithouttheAbsorptionofpGloPlasmidinE.coli
Objective:AfterthetransformationofE.colibytheuptakeofthepGloplasmid,the
bacteriashouldbeabletogrowandhavefluorescence.
IndependentVariable:absorptionofpGloplasmid.
DependentVariable:theabilitytogrowandglowinvaryingenvironmentalconditions.
Controls:pGloLBplate,pGloLBampplate.
Constants:heatshockprocedure,receivingLBbrothafterheatshock,minimumof24
hoursincubationperiodwithincubatorsetat37degreesCelsius(agarfacingdown);
samestrainofE.coli.
Introduction:Inthislab,bacterialtransformationwasused.Thisisaprocessoftakinga
pieceofprotein,orDNA,andinsertingitintoanotherorganismchangingitsgenesand
traits.Genetictransformationisregularlyusedineverydaylife(suchasfoodmaking
processes)andbioremediationforsickpeople(suchaspeoplewithdiabetes).*The
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insulinismadebybacteria,theplasmidintheinsulinattachestotheirDNAand
completesthesequence,healingthemtemporarily.Thislabusestheprocessofbacterial
transformationtomakeE.coli(abacteriumfoundinintestinesofhumansandanimals)
glowbyinsertingthePGLOplasmidfromajellyfish.Heatshockwasusedtocomplete
theprocessoftransformation.Heatshockisdonebyputtingthetesttubesintheicebath,
thenputtingthemintothehotbath,andthenbackintotheicebathagain.Thisprocess
expandsandcontractsthecells,whichmakesthemmorepermeabletoplasmids.A
plasmidisageneticstructurethatreplicateswithoutchromosomes,andisusedto
manipulategenes.Thisplasmid(GreenFlorescenceProteinorGFP)wheninserted
properlywithsugarwillmakethebacteriumglow.Thesugar,arabinose,makesitglow
becausetheprotein,inordertowork,needsanenergysourcetobind.Whenthe
arabinoseispresent,araCbindstothesugarandinstructstheRNAPolymerasetomake
copiesoftheGFPmRNAflorescenceoccurswhenenergyfromanoutsidesourceof
lightisabsorbedbyacellandalmostimmediatelyremittedduetoachemicalreaction
insideanorganism(BioRad).Thisreactionisaidedbyrestrictionenzymes;itcutsboth
endsoftheplasmidneededintheotherDNA,andcreatesstickyendsthatwillattach
easilytoeachother.Oncethestickyendsaretogether,theDNAstrandiscomplete,and
theprocessiscomplete.
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Materials:
250lTransformationsolution
Ice
pGLO
PlasmidDNA
Rack
pGLO
+pGlo
Ice
Incubator
Racksothebottomofthetubesstickoutandmakecontactwiththeice.
4E.coliplates
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Procedure:
TransformationKitQuickGuide
1. Labeloneclosedmicrotesttube+pGLOandanotherpGLO.Labelbothtubes
withyourgroupsname.Placetheminthefoamtuberack.
2. Openthetubesandusingasteriletransferpipet,transfer250loftransformation.
3. Placethetubesoncrushedice.Donotusecubedice.
4. Useasterilelooptopickupasinglecolonyofbacteriafromyourstarterplate.
Pickupthe+pGLOtubeandimmersetheloopintothetransformationsolutionat
thebottomofthetube.Spintheloopbetweenyourindexfingerandthumbuntil
theentirecolonyisdispersedinthetransformationsolution(withnofloating
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chunks).Placethetubebackinthetuberackintheice.Usinganewsterileloop,
repeatforthepGLOtube.
5. ExaminethepGLOplasmidDNAsolutionwiththeUVlamp.Noteyour
observations.ImmerseanewsterileloopintotheplasmidDNAstocktube.
Withdrawaloopful.Thereshouldbeafilmofplasmidsolutionacrossthering.
Thisissimilartoseeingasoapyfilmacrossaringforblowingsoapbubbles.Mix
theloopfulintothecellsuspensionofthe+pGLOtube.Optionally,pipet10lof
pGLOplasmidintothe+pGLOtubeandmix.ClosethepGLOtubeandreturnit
totherackonice.DonotaddplasmidDNAtothepGLOtube.Closethe
pGLGOtubeandreturnittotherackonice.
6. Incubatethetubesonicefor10min.Makesuretopushthetubesalltheway
downintherack.
7. Whilethetubesaresittingonice,labelyourfouragarplatesonthebottom(not
thelid)asshownonthediagram.
8. Heatshock.Usingthefoamrackasaholder,transferboththe(+)pGLOand()
pGLOtubesintothewaterbath,setat42C,forexactly50seconds.Makesureto
pushthetubesallthewaydownintheracksothebottomofthetubesstickout
andmakecontactwiththewarmwater.Whenthe50secondshavepassed,place
bothtubesbackonice.Forthebesttransformationresults,thechangefromthe
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ice(0C)to42Candthenbacktotheicemustberapid.Incubatetubesonicefor
2min.
9. Removetherackcontainingthetubesfromtheiceandplaceonthebenchtop.
Openatubeand,usinganewsterilepipet,add250lofLBnutrientbrothtothe
tubeandrecloseit.Repeatwithanewsterilepipetfortheothertube.Incubatethe
tubesfor10minsatroomtemperature.
10. Gentlyflicktheclosedtubeswithyourfingertomix.Usinganewsterilepipetfor
eachtube,pipet100lfromeachofthetubestothecorrespondingplates,as
shownonthediagramontotheappropriateplates.
11. Useanewsterileloopforeachplate.Spreadthesuspensionsevenlyaroundthe
surfaceoftheagarbyquicklyskatingtheflatsurfaceofanewsterileloopback
andforthacrosstheplatesurface.
12. Stackupyourplatesandtapethemtogether.Putyourgroupnameandclass
periodonthebottomofthestackandplacethestackupsidedowninthe37C
incubatoruntilthenextday.
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DataTable1:Resultsfrombacterialtransformation
Plate
Conditions
Expected
Results
Expected Observed
Results
Results
Observed
Results
PhotoofPlate
Growth
Color
UVand
nonUV
ColorUV
andnonUV
Growth
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Plate1
Yes
UV
yellow
NonUV
yellow
Yes
No
Nocolor
No
Nocolor
Yes
UV
yellow
Yes
UVyellow
LBpGlo
(no
plasmid)
Plate2
UVyellow
NonUV
yellow
LB/amp
pGlo(no
plasmid)
Plate3
LBAmp
+pGlo
(plasmid)
Plate4
LBAmpara
+pGlo
NonUV
offwhite,
yellow
NonUV
yellow
Yes
UV
Green
Yes
NonUV
offwhite
UVGreen
NonUV
yellow,off
white
Conclusion:
Claim:AfterthetransformationofE.colibytheuptakeofthepGloplasmid,thebacteria
shouldbeabletogrowandhavefluorescence.
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Evidence:Indatatableone,theplates1,3,and4grew;however,onlyoneofthose
platesglowedintheUVlight.Inthepicture,itshowstheplatewiththesugarandAmp
geneglowingundertheUVlight.Plate3,theonewithoutthesugar,didnotglowunder
theUVlights,andthecontrolledplate,plate1,didnotglow.Plate2neitherglowednor
grew.
Reasoning:Theplatethatpossessedtheabilitytogrow,Plate4,grewbecausetherewas
sugarprovidedfortheE.colitofeedoffof,andreproducerapidly.Becauseitreproduced
withtheAmp,thepGloplasmidwasputintothenewDNAofE.coli.Theotherplates
mayhavegrownjustasmuch,orevenmorethenPlate4,buttheydidnotglowbecause
oftheabsenceofsugararabinose.Withoutarabinose,thereisnoenergyforthepGlo
genetobeactivated,anddoesnotglowbecauseofthis.Heatshockexpandsandcontracts
thecells,whichmakesthemmorepermeabletoplasmids,whichishowplate4beganto
glow.Plate2didnotgroworglowbecauseitneitherhadthesugarnortheAmpgeneto
reproducelikePlate1,3and4did.Plates1and3grew,becausetheampgenewaspresent
andcombinedtotheDNA,howevertheydidnotglowbecausetheydonothavethe
genestoreproducetheglowinggene,orthefoodtoprovidetheenergytosupportthe
glowinggene.
Reflection: This experiment was properly executed, and nothing was
out of the ordinary in the results obtained from putting the pGlo gene
into the E. coli. The only exception to this would be the pictures of the
controls in the data table. Another group took these photos; however,
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because these controls are all the same, it was acceptable to take the
pictures from them. The experiment, though successful, did not have
some of the same results in other classes. Doing the experiment for
longer time periods while in the ice, hot bath, and incubator, may
increase the percentage of successful results. Doing the experiment
multiple times would also increase the accuracy of each experiment.
The controls, pGloLBplateandpGloLBAmpplate,areintheexperimenttoadd
validity,andcomparisontotheotherplatesthathadthearabinoseand+pGloplasmids
addedtothem.Theconstantscreatedtheisolatedvariablesthatweretestedinthis
experiment;theseareoneofthemostimportantitemsbecauseitdecipherswhatexactly
isbeingtested.Thelevelofconfidenceinthisexperimentwashighbecauseallofthe
controls,constants,andtestedvariableswereintheproperplacesandattherighttimes.
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