Seqera

We're excited to be hosting a joint webinar with BigOmics Analytics on the integration of Omics Playground into Studios as a powerful new way to interactively explore RNA-Seq and proteomics results within Seqera Platform! ☑️ Learn about Omics Playground—a data discovery and exploration platform for single and multiomics that enables bioinformaticians to interactively share analysis results with biologists, while simplifying the analysis, interpretation, and presentation of complex biological data. ☑️ Explore how Studios, a core feature of #Seqera Platform, streamlines the entire data lifecycle by bringing reproducible, containerized and interactive analytical environments to your existing data. ☑️Watch a live demonstration of Omics Playground running within Studios, featuring a real-world drug resistance use case that showcases how this integration supports faster, scalable end-to-end omics analysis. Register below 👇

Building a National Research Platform for Nextflow users in Australia ✨ In the latest episode of the Nextflow Podcast, Dr. Steven Manos and Ziad Al-Bkhetan from Australian BioCommons discuss how they're building a world-class bioinformatics infrastructure across Australia using #Nextflow and #Seqera Platform! 🎙️Watch now: https://hubs.la/Q03qmkV60

🎤 Did you catch Esha Joshi's talk on scaling with Seqera? Turning a research project into a robust, real-world solution requires tools that support both early ideation and mega-scale computation. In this talk, Esha shared how Seqera empowers scientists to scale code, compute, projects, and teams—from early experimentation to enterprise-level deployments. 🔗 Watch the full talk here: https://hubs.la/Q03pHh220 🎥 Check out the #NextflowSummit playlist: https://hubs.la/Q03pHl7q0

Deploying custom applications in Seqera Studios ✨ Studios lets you run interactive analysis applications on the same infrastructure as your #Nextflow workflows, so you can explore, iterate and collaborate faster. With pre-built, version-controlled template images for Jupyter, RStudio, VS Code, and Xpra, Studios already offers powerful flexible options out of the box. But sometimes, you need something even more specific. The solution? Create the tools you need, when you need them. 💡Our latest blog post shows how to build custom Docker images for Studios, with real-world examples including: 🔹marimo: https://hubs.la/Q03psLBd0 🔹Streamlit: https://hubs.la/Q03pszwS0 🔹CELLxGENE: https://hubs.la/Q03psCwb0 🔹Shiny: https://hubs.la/Q03pswN-0 📖 Read the blog post: https://hubs.la/Q03psx6v0

🚀Check out Seqera AI Pipeline Mode: a new way to build and debug entire #Nextflow pipelines! With Pipeline Mode, you can: 🔹Connect your own pipelines via GitHub or explore public examples 🔹Generate entire Nextflow pipelines, fully integrated with nf-core modules 🔹Understand your pipeline’s structure, components, and functionality with AI 🔹Build, customize, and debug workflows in an interactive, transparent environment 🔹Run tests and checks like nf-test and dry-run for confidence before execution 💡Try it now: https://hubs.ly/Q03pdgYc0

📢 Last chance to register for today's "What's New" product webinar! Join our product team for a deep dive into the latest updates to Nextflow and Seqera Platform that are powering faster, scalable, and more collaborative bioinformatics. ✔️ Nextflow 25.04: From strict syntax to native data lineage support, discover how the latest Nextflow updates are providing developers with a more powerful, intuitive, and reproducible experience. ✔️ Studios GA: Learn how session lifespan management, resource labeling, and private sessions are enhancing flexibility, improving cost control, and enabling secure, isolated development environments. ✔️ Seqera Compute: Explore how Seqera Compute is enabling scalable pipeline execution and interactive analysis without the infrastructure burden for faster, more cost-efficient bioinformatics. 👉 Register now: https://hubs.la/Q03p9h080

We're excited to share our latest case study on streamlining bioinformatics at Bio-Rad Laboratories with Fusion! 🚀 By automating infrastructure setup and optimizing data access, Bio-Rad reduced data processing times, eliminated storage inefficiencies, and cut cloud expenses—freeing researchers to focus on scientific discovery and innovation. Faster workfllows. Cost-Efficiency. Simplified Infrastructure. 📚Read the full case study: https://hubs.la/Q03nL9qB0

Welcome to the May 2025 edition of the Seqera Newsletter: Product updates from #NextflowSummit, Regulatory-grade Bioinformatics, Industry Insights, and More! Subscribe below! 👇

🚀 What's New product webinar is happening on May 27! Join us for an exclusive webinar with our product team as they deep-dive into the latest product updates to Nextflow and Seqera. 🔹 From strict syntax to native data lineage support, discover how the latest Nextflow updates are providing developers with a more powerful, intuitive, and reproducible experience. 🔹Explore how Seqera Compute is enabling scalable pipeline execution and interactive analysis without the infrastructure burden for faster, more cost-efficient bioinformatics. 🔹 Learn how session lifespan management, resource labeling, and private sessions features of Studios are enhancing flexibility, improving cost control, and enabling secure, isolated development environments. 👉 Register now: https://hubs.la/Q03nt_740

🎉 Nextflow Summit Boston 2025 – What a Week! Last week, we brought together industry experts from around the world to shape the future of biotech and pharma through innovation in data science and computational biology. Here are a some key highlights: 📢 Evan Floden announced some exciting product updates to Seqera, from compute optimization and pipeline resilience, to smarter platform intelligence and an elevated developer experience: https://hubs.la/Q03ngJYm0 📄Attendees from organizations including Stowers Institute for Medical Research, New England Biolabs, and Amazon Web Services (AWS) presented insightful posters in the lightning rounds: https://hubs.la/Q03ngKRm0 💻 Paolo Di Tommaso demoed new features as part of the #Nextflow 25.04 release, including a new syntax parser and data lineage as a fully integrated, native capability: https://hubs.la/Q03ngL3V0 💡 Insightful keynote talk from Luisa Herrmann, founder of AINovva, on doing #AI right—exploring promises, risks, and the urgent need for ethical, equitable frameworks to drive better patient outcomes: https://hubs.la/Q03ngLM_0 🎤 Fireside chat with Brice Sarver, Ph.D. and Kostantinos Karagiannis on integrating bioinformatics into the regulated pharma lifecycle, and how to balance innovation with GxP compliance to scale pipelines in pharma: https://hubs.la/Q03ngMVm0 ✨ Inspiring panel discussion with Lorena Pantano, Saba Nafees, and Francine Camacho, PhD highlighting the importance of diversity and equity in spaces occupied by the Nextflow community, as well as challenges in science: https://hubs.la/Q03ngNhy0 Thanks to everyone who joined us in Boston. 🌎The Nextflow community continues to inspire us! 👏