2025

Forbes, L., Papanatsiou, M., Palombo, A., Christie, J. M. and Amtmann, A. (2025) Optogenetic control of gene expression in the cyanobacterium synechococcus sp. PCC 7002. Frontiers in Bioengineering and Biotechnology, 12, 1529022. (doi: 10.3389/fbioe.2024.1529022)

2024

Busch, F. A. et al. (2024) A guide to photosynthetic gas exchange measurements: fundamental principles, best practice and potential pitfalls. Plant, Cell and Environment, 47(9), pp. 3344-3364. (doi: 10.1111/pce.14815) (PMID:38321805)

Kulkarni, J. et al. (2024) Early-responsive molecular signatures associated with halophytic adaptation in Sesuvium portulacastrum (L.). Plant, Cell and Environment, 47(3), pp. 961-975. (doi: 10.1111/pce.14767) (PMID:38044749)

Perrella, G., Fasano, C., Donald, N. A., Daddiego, L., Fang, W., Martignago, D., Carr, C., Conti, L., Herzyk, P. and Amtmann, A. (2024) Histone Deacetylase Complex 1 and Histone 1 epigenetically moderate stress responsiveness of Arabidopsis thaliana seedlings. New Phytologist, 241(1), pp. 166-179. (doi: 10.1111/nph.19165) (PMID:37565540) (PMCID:PMC10953426)

Shahzad, Z. et al. (2024) Protein kinase SnRK2. 4 is a key regulator of aquaporins and root hydraulics in Arabidopsis. Plant Journal, 117(1), pp. 264-279. (doi: 10.1111/tpj.16494) (PMID:37844131)

2023

Harris, C. J., Amtmann, A. and Ton, J. (2023) Epigenetic processes in plant stress priming: open questions and new approaches. Current Opinion in Plant Biology, 75, 102432. (doi: 10.1016/j.pbi.2023.102432) (PMID:37523900)

Madsen, M. A., Semerdzhiev, S., Twigg, J. D., Moss, C., Bavington, C. D. and Amtmann, A. (2023) Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 6803. Applied Microbiology and Biotechnology, 107, pp. 6121-6134. (doi: 10.1007/s00253-023-12697-9) (PMID:37552253) (PMCID:PMC10485101)

McInnes, K. J., van der Hooft, J. J.J. , Sharma, A., Herzyk, P. , Hundleby, P. A.C., Schoonbeek, H.-J., Amtmann, A. , Ridout, C. and Jenkins, G. I. (2023) Overexpression of Brassica napus COMT1 in Arabidopsis heightens UV-B-mediated resistance to Plutella xylostella herbivory. Photochemical and Photobiological Sciences, 22, pp. 2341-2356. (doi: 10.1007/s43630-023-00455-9) (PMID:37505444) (PMCID:PMC10509076)

2022

Eshel, G. et al. (2022) Positive selection and heat‐response transcriptomes reveal adaptive features of the Brassicaceae desert model, Anastatica hierochuntica. New Phytologist, 236(3), pp. 1006-1026. (doi: 10.1111/nph.18411) (PMID:35909295) (PMCID:PMC9804903)

Horaruang, W. et al. (2022) Engineering a K+ channel 'sensory antenna' enhances stomatal kinetics, water use efficiency and photosynthesis. Nature Plants, 8(11), pp. 1262-1274. (doi: 10.1038/s41477-022-01255-2) (PMID:36266492)

Thu, N. B.A. , Amtmann, A. , Blatt, M. R. and Nguyen, T.-H. (2022) Stomata under salt stress—what can mechanistic modeling tell us? In: Shabala, S. (ed.) Stomata Regulation and Water Use Efficiency in Plants under Saline Soil Conditions. Series: Advances in botanical research (103). Academic Press: Amsterdam, pp. 139-162. ISBN 9780323912174 (doi: 10.1016/bs.abr.2022.02.012)

2021

Eaglesfield, R., Madsen, M. A., Sanyal, S., Reboud, J. and Amtmann, A. (2021) Co-translational recruitment of ribosomes in minimal protocells recreates a translocon-independent mechanism of proteorhodopsin biogenesis. iScience, 24(5), 102429. (doi: 10.1016/j.isci.2021.102429) (PMID:33997704) (PMCID:PMC8102411)

Madsen, M. A., Hamilton, G., Herzyk, P. and Amtmann, A. (2021) Environmental regulation of PndbA600, an auto-inducible promoter for two-stage industrial biotechnology in cyanobacteria. Frontiers in Bioengineering and Biotechnology, 8, 619055. (doi: 10.3389/fbioe.2020.619055) (PMID:33542914) (PMCID:PMC7853294)

2020

Shahzad, Z., Eaglesfield, R., Carr, C. and Amtmann, A. (2020) Cryptic variation in RNA-directed DNA-methylation controls lateral root development when auxin signaling is perturbed. Nature Communications, 11, 218. (doi: 10.1038/s41467-019-13927-3) (PMID:31924796) (PMCID:PMC6954204)

2018

Madsen, M. A., Semerdzhiev, S., Amtmann, A. and Tonon, T. (2018) Engineering mannitol biosynthesis in Escherichia coli and Synechococcus sp. PCC 7002 using a green algal fusion protein. ACS Synthetic Biology, 7, pp. 2833-2840. (doi: 10.1021/acssynbio.8b00238) (PMID:30408953)

Davis, J. L., Armengaud, P., Larson, T. R., Graham, I. A., White, P. J., Newton, A. C. and Amtmann, A. (2018) Contrasting nutrient‐disease relationships: potassium gradients in barley leaves have opposite effects on two fungal pathogens with different sensitivities to jasmonic acid. Plant, Cell and Environment, 41(10), pp. 2357-2372. (doi: 10.1111/pce.13350) (PMID:29851096) (PMCID:PMC6175101)

Shahzad, Z., Kellermeier, F., Armstrong, E. M., Rogers, S. , Lobet, G., Amtmann, A. and Hills, A. (2018) EZ-Root-VIS: A software pipeline for the rapid analysis and visual reconstruction of root system architecture. Plant Physiology, 177(4), pp. 1368-1381. (doi: 10.1104/pp.18.00217) (PMID:29895611)

Amtmann, A. , Armengaud, P. and Volkov, V. (2018) Potassium nutrition and salt stress. In: Roberts, J. (ed.) Annual Plant Reviews. John Wiley & Sons, Ltd, pp. 328-379. ISBN 9781119312994 (doi: 10.1002/9781119312994.apr0151)

2017

Shahzad, Z. and Amtmann, A. (2017) Food for thought: how nutrients regulate root system architecture. Current Opinion in Plant Biology, 39, pp. 80-87. (doi: 10.1016/j.pbi.2017.06.008) (PMID:28672167) (PMCID:PMC5605224)

Amtmann, A. and Shahzad, Z. (2017) To respond or not to respond? Natural variation of root architectural responses to nutrient signals. Journal of Experimental Botany, 68(11), pp. 2636-2640. (doi: 10.1093/jxb/erx160) (PMCID:PMC5853800)

Papanatsiou, M., Amtmann, A. and Blatt, M. R. (2017) Stomatal clustering in Begonia associates with the kinetics of leaf gaseous exchange and influences water use efficiency. Journal of Experimental Botany, 68(9), pp. 2309-2315. (doi: 10.1093/jxb/erx072) (PMID:28369641) (PMCID:PMC5447881)

Asensi-Fabado, M. A., Amtmann, A. and Perrella, G. (2017) Plant responses to abiotic stress: the chromatin context of transcriptional regulation. Biochimica et Biophysica Acta: Gene Regulatory Mechanisms, 1860(1), pp. 106-122. (doi: 10.1016/j.bbagrm.2016.07.015) (PMID:27487458)

2016

Papanatsiou, M., Amtmann, A. and Blatt, M. R. (2016) Stomatal spacing safeguards stomatal dynamics by facilitating guard cell ion transport independent of the epidermal solute reservoir. Plant Physiology, 172(1), pp. 254-263. (doi: 10.1104/pp.16.00850) (PMID:27406168)

Perrella, G., Carr, C., Asensi-Fabado, M. A., Donald, N. A., Páldi, K., Hannah, M. A. and Amtmann, A. (2016) The Histone Deacetylase Complex (HDC) 1 protein of Arabidopsis thaliana has the capacity to interact with multiple proteins including histone 3-binding proteins and histone 1 variants. Plant Physiology, 171(1), pp. 62-70. (doi: 10.1104/pp.15.01760) (PMID:26951436) (PMCID:PMC4854681)

Chen, Z.-H. et al. (2016) Nitrate reductase mutation alters potassium nutrition as well as nitric oxide-mediated control of guard cell ion channels in Arabidopsis. New Phytologist, 209(4), pp. 1456-1469. (doi: 10.1111/nph.13714) (PMID:26508536)

2015

Amtmann, A. , Ma, H. and Wagner, D. (2015) Chromatin and epigenetics. Plant Physiology, 168(4), pp. 1185-1188. (doi: 10.1104/pp.15.01023) (PMID:26246617)

Minas, K. et al. (2015) Biodesalination: an emerging technology for targeted removal of Na+and Cl−from seawater by cyanobacteria. Desalination and Water Treatment, 55(10), pp. 2647-2668. (doi: 10.1080/19443994.2014.940647)

2014

Benito, B., Haro, R., Amtmann, A. , Cuin, T. A. and Dreyer, I. (2014) The twins K+ and Na+ in plants. Journal of Plant Physiology, 171(9), pp. 723-731. (doi: 10.1016/j.jplph.2013.10.014)

Amezaga, J. M. et al. (2014) Biodesalination: a case study for applications of photosynthetic bacteria in water treatment. Plant Physiology, 164(4), pp. 1661-1676. (doi: 10.1104/pp.113.233973)

Kellermeier, F., Armengaud, P., Seditas, T. J., Danku, J., Salt, D. E. and Amtmann, A. (2014) Analysis of the root system architecture of Arabidopsis provides a quantitative readout of crosstalk between nutritional signals. Plant Cell, 26(4), pp. 1480-1490. (doi: 10.1105/tpc.113.122101)

2013

Kellermeier, F., Chardon, F. and Amtmann, A. (2013) Natural variation of arabidopsis root architecture reveals complementing adaptive strategies to potassium starvation. Plant Physiology, 161(3), pp. 1421-1432. (doi: 10.1104/pp.112.211144)

Perrella, G., Lopez Vernaza, M.A., Carr, C., Sani, E., Gossele, V., Verduyn, C., Kellermeier, F., Hannah, M.A. and Amtmann, A. (2013) Histone deacetylase complex1 expression level titrates plant growth and abscisic acid sensitivity in Arabidopsis. Plant Cell, 25(9), pp. 3491-3505. (doi: 10.1105/tpc.113.114835)

Sani, E., Herzyk, P. , Perrella, G., Colot, V. and Amtmann, A. (2013) Hyperosmotic priming of arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome. Genome Biology, 14(6), R59. (doi: 10.1186/gb-2013-14-6-r59) (PMID:23767915) (PMCID:PMC3707022)

2012

Chen, Z.-H., Hills, A., Batz, U., Amtmann, A. , Lew, V.L. and Blatt, M.R. (2012) Systems dynamic modeling of the stomatal guard cell predicts emergent behaviors in transport, signaling, and volume control. Plant Physiology, 159(3), pp. 1235-1251. (doi: 10.1104/pp.112.197350)

Hills, A., Chen, Z.-H., Amtmann, A. , Blatt, M.R. and Lew, V.L. (2012) OnGuard, a computational platform for quantitative kinetic modeling of guard cell physiology. Plant Physiology, 159(3), pp. 1026-1042.

2011

Krämer, U. and Amtmann, A. (2011) Physiology and metabolism. Current Opinion in Plant Biology, 14(3), pp. 223-224. (doi: 10.1016/j.pbi.2011.04.008)

2010

Garcia-Mata, C., Wang, J., Gajdanowicz, P., Gonzalez, W., Hills, A., Donald, N., Riedelsberger, J., Amtmann, A. , Dreyer, I. and Blatt, M.R. (2010) A minimal cysteine motif required to activate the SKOR K+ channel of arabidopsis by the reactive oxygen species H2O2. Journal of Biological Chemistry, 285(38), pp. 29286-29294. (doi: 10.1074/jbc.M110.141176) (PMID:20605786) (PMCID:PMC2937961)

Teakle, N.L., Amtmann, A. , Real, D. and Colmer, T.D. (2010) Lotus tenuis tolerates combined salinity and waterlogging: maintaining O2 transport to roots and expression of an NHX1-like gene contribute to regulation of Na+ transport. Physiologia Plantarum, 139(4), pp. 358-374. (doi: 10.1111/j.1399-3054.2010.01373.x)

Armengaud, P., Breitling, R. and Amtmann, A. (2010) Coronatine-insensitive 1 (COI1) mediates transcriptional responses of Arabidopsis thaliana to external potassium supply. Molecular Plant, 3(2), pp. 390-405. (doi: 10.1093/mp/ssq012) (PMID:20339157) (PMCID:PMC2845782)

Amtmann, A. and Beilby, M.J.. (2010) The role of ion channels in plant salt tolerance. In: Demidchik, V. and Maathuis, F. (eds.) Ion Channels and Plant Stress Responses. Series: Signaling and communication in plants. Springer: Heidelberg, pp. 23-46. ISBN 9783642104930 (doi: 10.1007/978-3-642-10494-7_2)

Troufflard, S., Mullen, W. , Larson, T. R., Graham, I. A., Crozier, A., Amtmann, A. and Armengaud, P. (2010) Potassium deficiency induces the biosynthesis of oxylipins and glucosinolates in Arabidopsis thaliana. BMC Plant Biology, 10(1), p. 172. (doi: 10.1186/1471-2229-10-172)

2009

Armengaud, P., Sulpice, R., Miller, A.J., Stitt, M., Amtmann, A. and Gibon, Y. (2009) Multilevel analysis of primary metabolism provides new insights into the role of potassium nutrition for glycolysis and nitrogen assimilation in arabidopsis roots. Plant Physiology, 150(2), pp. 772-785. (doi: 10.1104/pp.108.133629)

Armengaud, P., Zambaux, K., Hills, A., Sulpice, R., Pattison, R. J., Blatt, M. R. and Amtmann, A. (2009) EZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture. Plant Journal, 57(5), pp. 945-956. (doi: 10.1111/j.1365-313X.2008.03739.x)

Amtmann, A. and Blatt, M.R. (2009) Regulation of macronutrient transport. New Phytologist, 181(1), pp. 35-52. (doi: 10.1111/j.1469-8137.2008.02666.x)

Amtmann, A. (2009) Learning from evolution: Thellungiella generates new knowledge on essential and critical components of abiotic stress tolerance in plants. Molecular Plant, 2(1), pp. 3-12. (doi: 10.1093/mp/ssn094)

Amtmann, A. and Armengaud, P. (2009) Effects of N,P,K and S on metabolism: new knowledge gained from multi-level analysis. Current Opinion in Plant Biology, 12(3), pp. 275-283. (doi: 10.1016/j.pbi.2009.04.014)

Amtmann, A. and Leigh, R. (2009) Ion homeostasis. In: Pareek, A., Sopory, S.K., Bohnert, H.J. and Govindjee, (eds.) Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation. Springer: Dordrecht, pp. 245-262. ISBN 9789048131112 (doi: 10.1007/978-90-481-3112-9_12)

Boscari, A., Clement, M., Volkov, V., Golldack, D., Hybiak, J., Miller, A.J., Amtmann, A. and Fricke, W. (2009) Potassium channels in barley: cloning, functional characterization and expression analyses in relation to leaf growth and development. Plant, Cell and Environment, 32(12), pp. 1761-1777. (doi: 10.1111/j.1365-3040.2009.02033.x)

Pattison, R. J. and Amtmann, A. (2009) N-glycan production in the endoplasmic reticulum of plants. Trends in Plant Science, 14(2), pp. 92-99. (doi: 10.1016/j.tplants.2008.11.008)

Volkov, V., Boscari, A., Clement, M., Miller, A.J., Amtmann, A. and Fricke, W. (2009) Electrophysiological characterization of pathways for K+uptake into growing and non-growing leaf cells of barley. Plant, Cell and Environment, 32(12), pp. 1778-1790. (doi: 10.1111/j.1365-3040.2009.02034.x)

2008

Amtmann, A. , Troufflard, S. and Armengaud, P. (2008) The effect of potassium nutrition on pest and disease resistance in plants. Physiologia Plantarum, 133(4), pp. 682-691. (doi: 10.1111/j.1399-3054.2008.01075.x)

2007

Amtmann, A. and Armengaud, P. (2007) The role of calcium sensor-interacting protein kinases in plant adaptation to potassium-deficiency: new answers to old questions. Cell Research, 17(6), pp. 483-485. (doi: 10.1038/cr.2007.49)

2006

Amtmann, A. , Hammond, J., Armengaud, P. and White, P. (2006) Nutrient sensing and signalling in plants: Potassium and phosphorus. Advances in Botanical Research, 43, pp. 209-257. (doi: 10.1016/S0065-2296(05)43005-0)

Gobert, A., Park, G., Amtmann, A. , Sanders, D. and Maathuis, F. (2006) Arabidopsis thaliana Cyclic Nucleotide Gated Channel 3 forms a non-selective ion transporter involved in germination and cation transport. Journal of Experimental Botany, 57, pp. 791-800. (doi: 10.1093/jxb/erj064)

Volkov, V. and Amtmann, A. (2006) Thellungiella halophila, a salt-tolerant relative of Arabidopsis thaliana, has specific root ion-channel features supporting K+/Na+ homeostasis under salinity stress. Plant Journal, 48, pp. 342-353. (doi: 10.1111/j.1365-313X.2006.02876.x)

Wang, B., Davenport, R., Volkov, V. and Amtmann, A. (2006) Low unidirectional sodium influx into root cells restricts net sodium accumulation in Thellungiella halophila, a salt-tolerant relative of Arabidopsis thaliana. Journal of Experimental Botany, 57, pp. 1161-1170. (doi: 10.1093/jxb/erj116)

2005

Amtmann, A. (2005) Abiotic stress and plant genome evolution. Search for new models. Plant Physiology, 138(1), pp. 127-130. (doi: 10.1104/pp.105.059972)

Breitling, R., Armengaud, P. and Amtmann, A. (2005) Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds. BMC Bioinformatics, 6, (doi: 10.1186/1471-2105-6-181)

Jakobsen, M., Poulsen, L., Schulz, A., Fleurat-Lessard, P., Moller, A., Husted, S., Schiott, M., Amtmann, A. and Palmgren, M. (2005) Pollen development and fertilization in Arabidopsis is dependent on the MALE GAMETOGENESIS IMPAIRED ANTHERS gene encoding a type VP-type ATPase. Genes and Development, 19, pp. 2757-2769. (doi: 10.1101/gad.357305)

2004

Breitling, R., Armengaud, P., Amtmann, A. and Herzyk, P. (2004) Rank products: a simple, yet powerful, new method to detect differentially regulated genes in replicated microarray experiments. FEBS Letters, 573(1-3), pp. 83-92. (doi: 10.1016/j.febslet.2004.07.055)

Breitling, R., Amtmann, A. and Herzyk, P. (2004) Iterative Group Analysis (iGA): A simple tool to enhance sensitivity and facilitate interpretation of microarray experiments. BMC Bioinformatics, 5(34),

Amtmann, A. , Armengaud, P., Breitling, R. and Herzyk, P. (2004) Recent advances in using microarray technology to study the role of hormonal control in plant responses to abiotic stress. Acta Physiologiae Plantarum, 26, p. 92.

Armengaud, P., Breitling, R. and Amtmann, A. (2004) The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling. Plant Physiology, 136, pp. 2556-2576. (doi: 10.1104/pp.104.046482)

Breitling, R., Amtmann, A. and Herzyk, P. (2004) Graph-based iterative Group Analysis enhances microarray interpretation. BMC Bioinformatics, 5, (doi: 10.1186/1471-2105-5-100)

Volkov, V., Wang, B., Dominy, P., Fricke, W. and Amtmann, A. (2004) Thellungiella halophila, a salt-tolerant relative of Arabidopsis thaliana, possesses effective mechanisms to discriminate between potassium and sodium. Plant Cell and Environment, 27, pp. 1-14.

2003

Maathuis, F. et al. (2003) Transcriptome analysis of root transporters reveals participation of multiple gene families in the response to cation stress. Plant Journal, 35, pp. 675-692. (doi: 10.1046/j.1365-313X.2003.01839.x)

2001

Amtmann, A. (2001) Phylogenetic relationships within cation transporter families of Arabidopsis. Plant Physiology, 126(4), pp. 1646-1667. (doi: 10.1104/pp.126.4.1646)

Amtmann, A. (2001) The wheat cDNA LCT1 generates hypersensitivity to sodium in a salt-sensitive yeast strain. Plant Physiology, 126(3), pp. 1061-1071. (doi: 10.1104/pp.126.3.1061)