Bioconductor Missing data

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Missing Data TCGAbiolinks Kaplan-Meier LIHC Xenabrowser

6.3 years ago • updated 6.2 years ago jam526 • 0

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3.7k

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deseq2 sample_table missing data

updated 7.1 years ago by g.wang2 • 0 • written 10.9 years ago by anpham ▴ 70

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deseq2 paired samples missing data multiple treatments

updated 7.2 years ago by Michael Love 43k • written 7.2 years ago by greg.deakin • 0

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3.6k

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limma missing data methylation normalization

updated 8.3 years ago by Aaron Lun ★ 29k • written 8.3 years ago by mheydarpour ▴ 10

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3.1k

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limma contrast missing data lmfit makecontrasts

updated 8.4 years ago by Gordon Smyth 53k • written 8.5 years ago by wewolski ▴ 10

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1.2k

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pcamethods missing data

8.9 years ago eli-sava • 0

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software error rnaseq wgcna missing data

10.2 years ago • updated 9.8 years ago dvillarlozano ▴ 10

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1.3k

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cellhts2 upload missing data

updated 10.0 years ago by Joseph Barry ▴ 160 • written 10.0 years ago by zmorehouse • 0

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1.3k

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missing data filter

updated 10.2 years ago by James W. MacDonald 68k • written 10.2 years ago by rgescudero • 0

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1.9k

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missing data missing value imputation impute MICE bioconductor

10.3 years ago svlachavas ▴ 840

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1.8k

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software error missing data workflowinstall

10.8 years ago anoll2 • 0

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bayseq missing data

10.8 years ago k.w.lau • 0

12 results • Page 1 of 1

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Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Comment: GSEA in R/Bioconductor course by a2a2haa • 0

Academic researchers often share their breakthroughs and course updates through visual stories, making it essential to have tools that pres…

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…

Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo by a2a2haa • 0

By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…

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Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

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