Bioconductor Epicarray

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limma epicarray IlluminaHumanMethylationEPICanno.ilm10b2.hg19

written 14 months ago by Melisa Tecik • 0

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1.4k

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stattistics epicarray Epigenetics DMRcate

updated 2.3 years ago by James W. MacDonald 68k • written 2.3 years ago by Jitendra ▴ 10

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1.7k

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linearregression epicarray MethylationArray limma

2.5 years ago Jitendra ▴ 10

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1.9k

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RnBeads minfiData minfi EPICarray

updated 2.7 years ago by Basti ▴ 780 • written 2.7 years ago by Jitendra ▴ 10

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1.9k

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champ.load epicarray ChAMP methylationArrayAnalysis

2.8 years ago arisarkar88 ▴ 40

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2.0k

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methylationArrayAnalysis EPICarray ChAMP Champ.SVD

4.9 years ago • updated 4.8 years ago arisarkar88 ▴ 40

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4.1k

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ChAMP methylationepic epicarray epigenomics

updated 8.4 years ago by rcavalca ▴ 140 • written 8.4 years ago by karthikrpad ▴ 10

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Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Comment: GSEA in R/Bioconductor course by a2a2haa • 0

Academic researchers often share their breakthroughs and course updates through visual stories, making it essential to have tools that pres…

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…

Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo by a2a2haa • 0

By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…

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Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

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