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Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale.
From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
•
0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: wgcna module preseravtion taking too long?
by
a2a2hset32aa
•
0
Calculating WGCNA module preservation can be a resource heavy task, even with a 10-core processor. For a dataset of 9,800 genes, the permut…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
•
0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
Robert Castelo
★
3.4k
Hi Gordon, thanks for giving your advice on how to use sample weights with GSVA scores. I have not used so far sample weights with GSVA sco…
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Gordon Smyth
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