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bufferedmatrix
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Reading CEL files in using BufferedMatrix.justRMA
BufferedMatrix
BufferedMatrix
13.1 years ago
Emma Reick
▴ 10
0
votes
0
replies
997
views
Creating one matrix of intensity data from 4 diffrent CEL files
Normalization
cdf
probe
affy
BufferedMatrix
Normalization
cdf
probe
affy
BufferedMatrix
16.6 years ago
Radhika Ambatipudi
▴ 20
0
votes
0
replies
1.2k
views
Oligo package and tiling arrays - PM and MM
cdf
affyio
oligo
BufferedMatrix
cdf
affyio
oligo
BufferedMatrix
18.2 years ago
Naira Naouar
▴ 140
0
votes
3
replies
2.0k
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pd.mapping 10Karray
BiocViews
cdf
affyio
biocViews
oligo
pdInfoBuilder
BufferedMatrix
BiocViews
BiocViews
cdf
updated 18.5 years ago by
Seth Falcon
★ 7.4k • written 18.5 years ago by
Marianne Tuefferd
▴ 10
0
votes
1
reply
1.3k
views
Problem with snprma
SNP
Biobase
oligo
BufferedMatrix
SNP
Biobase
oligo
BufferedMatrix
updated 18.8 years ago by
Benilton Carvalho
★ 4.3k • written 18.8 years ago by
OLIVIERNUÑEZ
▴ 80
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Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https:/…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: wgcna module preseravtion taking too long?
by
a2a2hset32aa
• 0
Calculating WGCNA module preservation can be a resource heavy task, even with a 10-core processor. For a dataset of 9,800 genes, the permut…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
Robert Castelo
★ 3.4k
Hi Gordon, thanks for giving your advice on how to use sample weights with GSVA scores. I have not used so far sample weights with GSVA sco…
Votes
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
Answer: Which preprocessing steps are needed before running limpa?
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4.3k
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