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CIGAR
•
reset
4
votes
2
replies
1.5k
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GAlignments Cigar to GRanges
GenomicRanges
cigarRangesAlongReferenceSpace
GenomicAlignments
Cigar
9 months ago
pineiroalejandro
▴ 10
4
votes
6
replies
2.8k
views
How to query a base along an aligned read by genomic position?
GenomicAlignments
BAM
CIGAR
updated 6.3 years ago by
Janet Young
▴ 740 • written 6.3 years ago by
Shian Su
▴ 40
1
vote
2
replies
1.9k
views
GenomicAlignments and mapping CIGAR coordinates
cigar
not-implemented-yet
updated 6.3 years ago by
Hervé Pagès
16k • written 6.3 years ago by
stephen.rudd
• 0
2
votes
3
replies
1.4k
views
Rsubread CIGAR output M only?
Rsubread
cigar
updated 6.4 years ago by
Gordon Smyth
53k • written 6.4 years ago by
lauren.fitch
• 0
1
vote
4
replies
3.2k
views
How to find the end position of a read?
rsamtools
alignment
cigar
8.7 years ago
Frocha
▴ 20
1
vote
2
replies
2.9k
views
Finding mismatches between reads and reference sequence
bsgenome
cigar
alignment
updated 11.2 years ago by
Hervé Pagès
16k • written 11.2 years ago by
Stefanie Tauber
▴ 40
6 results • Page
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
Votes
Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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