PPICompare detects statistically significant rewiring events in protein-protein interaction networks - even if they are caused by alternative splicing - and reports plenty of information to that. The input data needs to be constructed with PPIXpress (see https://sourceforge.net/projects/ppixpress/).
The original publication can be found on https://bmcsystbiol.biomedcentral.com/articles/10.1186/s12918-017-0400-x.

Project Samples

Visualization of results in Cytoscape Workflow of PPICompare

Project Activity

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Categories

Molecular Science, Bio-Informatics, Medical

License

GNU General Public License version 3.0 (GPLv3)

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Additional Project Details

Operating Systems

Linux, Mac, Windows

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Java

Related Categories

Java Molecular Science Software, Java Bio-Informatics Software, Java Medical Software

Registered

2016-02-23
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