https://sourceforge.net/p/xia2/activity/Recent activity for xia2enThu, 16 Jul 2015 13:14:12 -0000https://sourceforge.net/p/xia2/code/5394/Cope with Windows style drive lettersGraeme WinterThu, 16 Jul 2015 13:14:12 -0000https://sourceforge.net/p/xia2/code/5394/https://sourceforge.net/p/xia2/code/5393/Add ability to set the image range on image=/pa...Graeme WinterThu, 16 Jul 2015 10:32:25 -0000https://sourceforge.net/p/xia2/code/5393/https://sourceforge.net/p/xia2/code/5392/Record log files from indexing & refine bravais...Graeme WinterThu, 16 Jul 2015 05:44:23 -0000https://sourceforge.net/p/xia2/code/5392/https://sourceforge.net/p/xia2/code/5391/if trust_beam_centre do not search other index ...Graeme WinterTue, 14 Jul 2015 13:51:40 -0000https://sourceforge.net/p/xia2/code/5391/https://sourceforge.net/p/xia2/code/5390/update testRichard GildeaMon, 13 Jul 2015 17:03:48 -0000https://sourceforge.net/p/xia2/code/5390/https://sourceforge.net/p/xia2/code/5389/Clean HTML clutterGraeme WinterMon, 13 Jul 2015 11:25:42 -0000https://sourceforge.net/p/xia2/code/5389/https://sourceforge.net/p/xia2/code/5388/Revert change which broke xia2html; FIXME need ...Graeme WinterFri, 10 Jul 2015 21:08:41 -0000https://sourceforge.net/p/xia2/code/5388/https://sourceforge.net/p/xia2/code/5387/use dials.check_indexing_symmetry to check for ...Richard GildeaFri, 10 Jul 2015 16:21:27 -0000https://sourceforge.net/p/xia2/code/5387/https://sourceforge.net/p/xia2/code/5386/update testRichard GildeaThu, 09 Jul 2015 17:12:54 -0000https://sourceforge.net/p/xia2/code/5386/https://sourceforge.net/p/xia2/code/5385/use glm background algorithm by defaultRichard GildeaThu, 09 Jul 2015 13:41:22 -0000https://sourceforge.net/p/xia2/code/5385/https://sourceforge.net/p/xia2/code/5384/update testsRichard GildeaThu, 09 Jul 2015 10:33:24 -0000https://sourceforge.net/p/xia2/code/5384/https://sourceforge.net/p/xia2/code/5383/update testsRichard GildeaWed, 08 Jul 2015 15:30:16 -0000https://sourceforge.net/p/xia2/code/5383/https://sourceforge.net/p/xia2/code/5382/more specific phil parameterRichard GildeaMon, 06 Jul 2015 15:48:25 -0000https://sourceforge.net/p/xia2/code/5382/https://sourceforge.net/p/xia2/code/5381/set min_local=0 in dials.find_spotsRichard GildeaMon, 06 Jul 2015 14:43:31 -0000https://sourceforge.net/p/xia2/code/5381/https://sourceforge.net/p/xia2/code/5380/fix testsRichard GildeaMon, 06 Jul 2015 14:43:22 -0000https://sourceforge.net/p/xia2/code/5380/https://sourceforge.net/p/xia2/code/5379/Work in progress towards detecting completely b...Graeme WinterThu, 02 Jul 2015 14:40:10 -0000https://sourceforge.net/p/xia2/code/5379/https://sourceforge.net/p/xia2/code/5378/dmin -> d_min, patch courtsey of jmp85Markus GerstelWed, 24 Jun 2015 16:14:08 -0000https://sourceforge.net/p/xia2/code/5378/https://sourceforge.net/p/xia2/code/5377/Accept reason in reindex assignmentGraeme WinterMon, 22 Jun 2015 10:01:18 -0000https://sourceforge.net/p/xia2/code/5377/https://sourceforge.net/p/xia2/code/5376/#1 explain why setting reindex operation to aid...Graeme WinterMon, 22 Jun 2015 10:00:51 -0000https://sourceforge.net/p/xia2/code/5376/https://sourceforge.net/p/xia2/code/5375/support global_threshold=autoRichard GildeaSat, 20 Jun 2015 17:44:53 -0000https://sourceforge.net/p/xia2/code/5375/https://sourceforge.net/p/xia2/code/5374/pass global_threshold parameter to dials.find_s...Richard GildeaFri, 19 Jun 2015 23:00:53 -0000https://sourceforge.net/p/xia2/code/5374/https://sourceforge.net/p/xia2/code/5373/catch phil interpretation runtimeerror and re-r...Richard GildeaFri, 19 Jun 2015 23:00:44 -0000https://sourceforge.net/p/xia2/code/5373/https://sourceforge.net/p/xia2/code/5372/If unify_setting; do the reindexing to a common...Graeme WinterFri, 19 Jun 2015 15:06:24 -0000https://sourceforge.net/p/xia2/code/5372/https://sourceforge.net/p/xia2/code/5371/Removed previous attempt at reindexing to stand...Graeme WinterFri, 19 Jun 2015 09:39:11 -0000https://sourceforge.net/p/xia2/code/5371/https://sourceforge.net/p/xia2/code/5370/A hill of commits working towards being able to...Graeme WinterThu, 18 Jun 2015 15:10:12 -0000https://sourceforge.net/p/xia2/code/5370/https://sourceforge.net/p/xia2/code/5369/Code to generate masks from diffraction images ...Graeme WinterWed, 17 Jun 2015 12:30:56 -0000https://sourceforge.net/p/xia2/code/5369/https://sourceforge.net/p/xia2/code/5368/typo fixGraeme WinterTue, 16 Jun 2015 18:59:49 -0000https://sourceforge.net/p/xia2/code/5368/https://sourceforge.net/p/xia2/code/5367/Changed syntax of is_similar_to: this is not te...Graeme WinterTue, 16 Jun 2015 12:44:27 -0000https://sourceforge.net/p/xia2/code/5367/https://sourceforge.net/p/xia2/code/5366/If modern aimless; set odd #terms as well as evenGraeme WinterTue, 16 Jun 2015 12:43:52 -0000https://sourceforge.net/p/xia2/code/5366/https://sourceforge.net/p/xia2/code/5365/If small molecule don't use 20 bins (messes thi...Graeme WinterTue, 16 Jun 2015 08:18:47 -0000https://sourceforge.net/p/xia2/code/5365/https://sourceforge.net/p/xia2/code/5364/Switch off SdB correction for small molecule wo...Graeme WinterTue, 16 Jun 2015 08:09:27 -0000https://sourceforge.net/p/xia2/code/5364/https://sourceforge.net/p/xia2/code/5363/Use wider scale factor ranges for small molecul...Graeme WinterTue, 16 Jun 2015 08:08:20 -0000https://sourceforge.net/p/xia2/code/5363/https://sourceforge.net/p/xia2/code/5362/Do not want to use this reindex at the moment, ...Graeme WinterTue, 16 Jun 2015 06:58:11 -0000https://sourceforge.net/p/xia2/code/5362/https://sourceforge.net/p/xia2/code/5361/Unwelcome emergent behaviour; now recording mer...Graeme WinterMon, 15 Jun 2015 10:59:13 -0000https://sourceforge.net/p/xia2/code/5361/https://sourceforge.net/p/xia2/code/5360/If small molecule and no reindex op; reindex MT...Graeme WinterMon, 15 Jun 2015 09:26:06 -0000https://sourceforge.net/p/xia2/code/5360/https://sourceforge.net/p/xia2/code/5359/Small changes to manipulate data less if small ...Graeme WinterSun, 14 Jun 2015 06:42:05 -0000https://sourceforge.net/p/xia2/code/5359/https://sourceforge.net/p/xia2/code/5358/Add a pointless tolerance development option; u...Graeme WinterFri, 12 Jun 2015 15:14:29 -0000https://sourceforge.net/p/xia2/code/5358/https://sourceforge.net/p/xia2/code/5357/fix testRichard GildeaThu, 11 Jun 2015 13:47:03 -0000https://sourceforge.net/p/xia2/code/5357/https://sourceforge.net/p/xia2/code/5356/working towards multi-sweep indexing (not yet c...Richard GildeaThu, 11 Jun 2015 13:29:20 -0000https://sourceforge.net/p/xia2/code/5356/https://sourceforge.net/p/xia2/code/5355/support for multiple sweeps in dials.index wrapperRichard GildeaThu, 11 Jun 2015 13:29:12 -0000https://sourceforge.net/p/xia2/code/5355/https://sourceforge.net/p/xia2/code/5354/Bodge scales file to put a space after Nparamet...Graeme WinterWed, 10 Jun 2015 14:30:14 -0000https://sourceforge.net/p/xia2/code/5354/https://sourceforge.net/p/xia2/code/5353/fix testRichard GildeaWed, 10 Jun 2015 14:14:39 -0000https://sourceforge.net/p/xia2/code/5353/https://sourceforge.net/p/xia2/code/5352/read mosaic from integrated_experiments.json ra...Richard GildeaWed, 10 Jun 2015 13:58:17 -0000https://sourceforge.net/p/xia2/code/5352/https://sourceforge.net/p/xia2/code/5351/update testRichard GildeaThu, 04 Jun 2015 12:03:01 -0000https://sourceforge.net/p/xia2/code/5351/https://sourceforge.net/p/xia2/code/5350/increase maximum timeout to 10 minutes. Timeout...Markus GerstelMon, 01 Jun 2015 17:11:31 -0000https://sourceforge.net/p/xia2/code/5350/https://sourceforge.net/p/xia2/code/5349/add missing importMarkus GerstelMon, 01 Jun 2015 17:11:31 -0000https://sourceforge.net/p/xia2/code/5349/https://sourceforge.net/p/xia2/code/5348/absolute maximum of 3 * rmsd_p1 to accept index...Richard GildeaFri, 29 May 2015 20:34:40 -0000https://sourceforge.net/p/xia2/code/5348/https://sourceforge.net/p/xia2/code/5347/fix broken xia2 -dialsRichard GildeaFri, 29 May 2015 20:15:56 -0000https://sourceforge.net/p/xia2/code/5347/https://sourceforge.net/p/xia2/code/5346/fast_mode for xia2 -dials: indexing of wedges (...Richard GildeaThu, 28 May 2015 18:56:08 -0000https://sourceforge.net/p/xia2/code/5346/https://sourceforge.net/p/xia2/code/5345/bug fixRichard GildeaThu, 28 May 2015 18:55:55 -0000https://sourceforge.net/p/xia2/code/5345/https://sourceforge.net/p/xia2/code/5344/Add a kernel size parameter for dialsGraeme WinterWed, 27 May 2015 21:18:37 -0000https://sourceforge.net/p/xia2/code/5344/https://sourceforge.net/p/xia2/code/5343/fix dials indexer followed by xds integraterRichard GildeaWed, 27 May 2015 03:28:25 -0000https://sourceforge.net/p/xia2/code/5343/https://sourceforge.net/p/xia2/code/5342/start counting from 1Markus GerstelFri, 22 May 2015 12:51:21 -0000https://sourceforge.net/p/xia2/code/5342/https://sourceforge.net/p/xia2/code/5341/download files in parallelMarkus GerstelFri, 22 May 2015 12:37:37 -0000https://sourceforge.net/p/xia2/code/5341/https://sourceforge.net/p/xia2/code/5340/Oops dont set defaultsGraeme WinterFri, 22 May 2015 12:05:22 -0000https://sourceforge.net/p/xia2/code/5340/https://sourceforge.net/p/xia2/code/5339/The big one; move defaults to be using DIALS no...Graeme WinterThu, 21 May 2015 15:18:05 -0000https://sourceforge.net/p/xia2/code/5339/https://sourceforge.net/p/xia2/code/5338/probably better to copy downloader code over, s...Markus GerstelWed, 20 May 2015 10:52:51 -0000https://sourceforge.net/p/xia2/code/5338/https://sourceforge.net/p/xia2/code/5337/use Downloader() module from bootstrap script. ...Markus GerstelWed, 20 May 2015 10:33:49 -0000https://sourceforge.net/p/xia2/code/5337/https://sourceforge.net/p/xia2/code/5336/fix case with download list file present. (It r...Markus GerstelTue, 19 May 2015 16:32:50 -0000https://sourceforge.net/p/xia2/code/5336/https://sourceforge.net/p/xia2/code/5335/updated testsRichard GildeaTue, 19 May 2015 16:17:04 -0000https://sourceforge.net/p/xia2/code/5335/https://sourceforge.net/p/xia2/code/5334/updated testsRichard GildeaTue, 19 May 2015 11:57:23 -0000https://sourceforge.net/p/xia2/code/5334/https://sourceforge.net/p/xia2/code/5333/update testsRichard GildeaTue, 19 May 2015 08:44:45 -0000https://sourceforge.net/p/xia2/code/5333/https://sourceforge.net/p/xia2/code/5332/update testsRichard GildeaMon, 18 May 2015 16:39:17 -0000https://sourceforge.net/p/xia2/code/5332/https://sourceforge.net/p/xia2/code/5331/a bit of a hack; restrain the sd parameters to ...Graeme WinterMon, 18 May 2015 12:16:40 -0000https://sourceforge.net/p/xia2/code/5331/https://sourceforge.net/p/xia2/code/5330/Little command-line tool to make pretty picture...Graeme WinterMon, 18 May 2015 09:16:47 -0000https://sourceforge.net/p/xia2/code/5330/https://sourceforge.net/p/xia2/code/5329/Kinder name for failure modeGraeme WinterSat, 16 May 2015 05:46:01 -0000https://sourceforge.net/p/xia2/code/5329/https://sourceforge.net/p/xia2/code/5328/Fix get_beam_centre to return the two-theta=0 e...Graeme WinterFri, 15 May 2015 15:35:05 -0000https://sourceforge.net/p/xia2/code/5328/https://sourceforge.net/p/xia2/code/5327/If small molecule data allow a larger relative ...Graeme WinterFri, 15 May 2015 15:26:16 -0000https://sourceforge.net/p/xia2/code/5327/https://sourceforge.net/p/xia2/code/5326/Allow command-line override of dials integratio...Graeme WinterThu, 14 May 2015 13:32:35 -0000https://sourceforge.net/p/xia2/code/5326/https://sourceforge.net/p/xia2/code/5325/add phil parameter for dials.refine interval_wi...Richard GildeaThu, 14 May 2015 13:30:38 -0000https://sourceforge.net/p/xia2/code/5325/https://sourceforge.net/p/xia2/code/5324/re-plot blend dendrogram with SWEEP labels; add...Richard GildeaWed, 13 May 2015 14:05:25 -0000https://sourceforge.net/p/xia2/code/5324/https://sourceforge.net/p/xia2/code/5323/expand dials phil_file parameters to absolute p...Richard GildeaWed, 13 May 2015 10:53:20 -0000https://sourceforge.net/p/xia2/code/5323/https://sourceforge.net/p/xia2/code/5322/dials.spotfinder phil scope -> dials.find_spotsRichard GildeaWed, 13 May 2015 10:00:27 -0000https://sourceforge.net/p/xia2/code/5322/https://sourceforge.net/p/xia2/code/5321/fix testsRichard GildeaWed, 13 May 2015 09:06:58 -0000https://sourceforge.net/p/xia2/code/5321/https://sourceforge.net/p/xia2/code/5320/update cell in testRichard GildeaTue, 12 May 2015 12:10:59 -0000https://sourceforge.net/p/xia2/code/5320/https://sourceforge.net/p/xia2/code/5319/use dials.discover_better_experimental_model in...Richard GildeaTue, 12 May 2015 09:30:39 -0000https://sourceforge.net/p/xia2/code/5319/https://sourceforge.net/p/xia2/code/5318/bug fix for deprecated -image optionRichard GildeaTue, 12 May 2015 08:25:15 -0000https://sourceforge.net/p/xia2/code/5318/https://sourceforge.net/p/xia2/code/5317/also take into account min_cc for 'worse' solut...Richard GildeaTue, 12 May 2015 08:25:08 -0000https://sourceforge.net/p/xia2/code/5317/https://sourceforge.net/p/xia2/code/5316/Add FIXME for > 1 abs surface@Graeme WinterMon, 11 May 2015 09:51:51 -0000https://sourceforge.net/p/xia2/code/5316/https://sourceforge.net/p/xia2/code/5315/Angles were back to front => surface was not co...Graeme WinterMon, 11 May 2015 09:28:58 -0000https://sourceforge.net/p/xia2/code/5315/https://sourceforge.net/p/xia2/code/5314/Print the other way around (makes more sense)Graeme WinterMon, 11 May 2015 08:58:56 -0000https://sourceforge.net/p/xia2/code/5314/https://sourceforge.net/p/xia2/code/5313/Typo fixedGraeme WinterMon, 11 May 2015 08:55:59 -0000https://sourceforge.net/p/xia2/code/5313/https://sourceforge.net/p/xia2/code/5312/Make PNG map of abs corr; not sure if right yet...Graeme WinterMon, 11 May 2015 08:31:30 -0000https://sourceforge.net/p/xia2/code/5312/https://sourceforge.net/p/xia2/code/5311/Discussed with PRE over the weekend, this shoul...Graeme WinterMon, 11 May 2015 08:18:25 -0000https://sourceforge.net/p/xia2/code/5311/https://sourceforge.net/p/xia2/code/5310/First cut at interpreting Aimless absorption su...Graeme WinterSun, 10 May 2015 05:36:49 -0000https://sourceforge.net/p/xia2/code/5310/https://sourceforge.net/p/xia2/code/5309/Changes to cope with centric data => no anomalo...Graeme WinterFri, 08 May 2015 10:22:38 -0000https://sourceforge.net/p/xia2/code/5309/https://sourceforge.net/p/xia2/code/5308/Repair broken XML file from pointless (bodge un...Graeme WinterFri, 08 May 2015 10:21:58 -0000https://sourceforge.net/p/xia2/code/5308/https://sourceforge.net/p/xia2/code/5307/If multiple data sets share abs surface; should...Graeme WinterFri, 08 May 2015 10:04:38 -0000https://sourceforge.net/p/xia2/code/5307/https://sourceforge.net/p/xia2/code/5306/update dials reflection statsRichard GildeaThu, 07 May 2015 16:18:59 -0000https://sourceforge.net/p/xia2/code/5306/https://sourceforge.net/p/xia2/code/5305/don't ignore user-specified beam centre in -dia...Richard GildeaThu, 07 May 2015 09:58:33 -0000https://sourceforge.net/p/xia2/code/5305/https://sourceforge.net/p/xia2/code/5304/better lattice decision making (and fixes test)Richard GildeaWed, 06 May 2015 16:39:26 -0000https://sourceforge.net/p/xia2/code/5304/https://sourceforge.net/p/xia2/code/5303/remove old-style parallelisationRichard GildeaWed, 06 May 2015 14:24:20 -0000https://sourceforge.net/p/xia2/code/5303/https://sourceforge.net/p/xia2/code/5302/include min_cc in deciding whether to reject a ...Richard GildeaWed, 06 May 2015 13:28:48 -0000https://sourceforge.net/p/xia2/code/5302/https://sourceforge.net/p/xia2/code/5301/Cope with user passing chemical compound (invol...Graeme WinterTue, 05 May 2015 14:23:39 -0000https://sourceforge.net/p/xia2/code/5301/https://sourceforge.net/p/xia2/code/5300/bug fixRichard GildeaTue, 05 May 2015 11:26:15 -0000https://sourceforge.net/p/xia2/code/5300/https://sourceforge.net/p/xia2/code/5299/A little jiffy to add FLAG column to unmerged d...Graeme WinterTue, 05 May 2015 08:53:04 -0000https://sourceforge.net/p/xia2/code/5299/https://sourceforge.net/p/xia2/code/5298/store symops in reciprocal spaceRichard GildeaSat, 02 May 2015 13:44:55 -0000https://sourceforge.net/p/xia2/code/5298/https://sourceforge.net/p/xia2/code/5297/bug fix for XDS CORRECT reindexing, need to tra...Richard GildeaFri, 01 May 2015 15:36:22 -0000https://sourceforge.net/p/xia2/code/5297/https://sourceforge.net/p/xia2/code/5296/Use by default abs surface in crystal frame not...Graeme WinterFri, 01 May 2015 15:29:35 -0000https://sourceforge.net/p/xia2/code/5296/https://sourceforge.net/p/xia2/code/5295/Little jiffy to read an unmerged MTZ file from ...Graeme WinterFri, 01 May 2015 15:19:46 -0000https://sourceforge.net/p/xia2/code/5295/