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    CUDA-MEME

    Ultrafast scalable motif discovery algorithm using GPU computing

    ...The experimental results showed that our algorithm scales well with respect to both dataset sizes and the number of GPUs. At present, OOPS and ZOOPS models are supported, which are sufficient for most motif discovery applications. In addtion, this algorithm has been incorporated to NVIDIA Tesla Bio Workbench and deployed in NIH Biowulf.
    Downloads: 0 This Week
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