Open Source Ruby Scientific/Engineering Software for ChromeOS

The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.

BenchLab is a Web Application benchmarking framework using real web browsers.

A quantitative finance C++ library for modeling, pricing, trading, and risk management in real-life. A cross-platform free/open-source tool for derivatives and financial engineering.

Cancer registries need a tool to input, store, check and analyse their data. If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry, quality control, consistency checks and basic analysis of the data It was designed with an emphasis on user friendliness, it has a modern user interface and is easy to navigate. Is available in several languages. (English, French, Spanish, Portuguese, Russian, Turkish, Georgian, and Chinese.)

JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts

Object oriented reusable software classes designed to be used to construct larger software projects developed in multiple software languages.

moved to https://github.com/Mithos/Euclid/wiki

The Feynman Simulation Framework provides a standard methodology for software engineers to develop simulations in Ruby with the flexibility to develop only the classes that are necessary to solve the physical problem.

Network Visualization is a mature part of computer science that is enjoying a good deal of growth, partially fueled by Bioinformatics. Network is a synonym for Graph, and both refer to a collection of nodes and edges.

Simulator of virtual animals made up of biological neural networks for research in the Computational Neuroscience field.

The Phenoscape project attempts to formalize the description of evolutionary characters to make them interoperable and computable with the body of phenotype annotation being generated by model organism databases, and other biomedical research.

PORIS toolkit allows describing graph-based systems and their behavior in a snapshot. It provides a web editor for a domain visual specific language (DSL) and transformation tools to generate software prototypes, system configurations, ...

Design and develop Recommendation and Adaptive Prediction Engines to address eCommerce opportunities. Build a portfolio of engines by creating and porting algorithms from multiple disciplines to a usable form. Try to solve NetFlix and other challenges.

Netlist database and manipulation API with interfaces to Java and Ruby. Verilog netlist inputs are supported. Project branch continues to evolve: https://github.com/gburdell/nldb including addition of tclsh UI.

reputron is a knowledge extraction engine platform that covers all aspect of text mining, relevance, indexing and querying on a corpus of text documents.