Showing 9 open source projects for "parallel computing"

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    NESSIE is a modern first-principle calculation software that can adequately address the need for ever-higher levels of numerical accuracy and high-performance in large-scale electronic structure simulations, as well as pioneer the fundamental study of quantum many-body effects in a large number of emerging nanomaterials. NESSIE is an electronic structure code that uses a real-space FEM discretization and domain-decomposition (DD) to perform all-electron ground-state DFT and real-time...
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  • 2
    PMCGPU

    PMCGPU

    Parallel simulators for Membrane Computing on the GPU

    Membrane Computing is a new research area (within Natural Computing) that aims to provide computing devices abstracted from the functioning and structure of living cells. These devices are called P systems. The objective of this project (PMCGPU) is to bring together all the researchers working on the development of parallel simulators for P systems, specially those using the GPU (e.g.
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  • 3

    SAT-Assembler

    Scalable and accurate targeted gene assembly for large-scale NGS data

    ...It recovers genes from gene families of particular interest to biologists with high coverage, low chimera rate, and extremely low memory usage compared with exiting gene assembly tools. Moreover, it is naturally compatible with parallel computing platforms.
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  • 4

    BriCS

    SaaS for running simulation models in the cloud

    The Bristol Cloud Service simulation runner is a cloud computing Software as a Service designed to enable users to quickly launch simulation code on Amazon AWS' Elastic Compute Cloud (EC2). BRiCS is written in Python using the Django framework and interacts with EC2 using the boto API. BriCS enables multiple simulation runs to be launched in parallel from a web browser. Model configuration (parameters) files are uploaded via the browser and results files are downloadable on completion. ...
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    ViennaX

    A flexible plugin execution framework for scientific computing in C++

    Welcome to the project homepage of ViennaX, a high-performance scientific computing C++ framework for executing plugins. A plugin system allows to wrap already available functionality into reusable components, which can have data input and output dependencies via a socket system. Different scheduler kernels are available, supporting serial and MPI-based distributed executions, supporting task and data parallelism.
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  • 6
    Distributed Parallel Programming for Python! This package builds on traditional Python by enabling users to write distributed, parallel programs based on MPI message passing primitives. General python objects can be messaged between processors. Ru
    Downloads: 1 This Week
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  • 7
    This project aims to modify Parallel Virtual Machine (PVM) to use benefits of RDMA-capable network interconnects, commonly used in HPC clusters.
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  • 8
    CPPScaLapack is a C++ class wrapper for PBLAS and ScaLAPACK with MPI. CPPScaLapack provides a user-friendly interface of high-speed parallel matrix calculation with BLAS and LAPACK techonologies for programers concerning with large-scale computing.
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  • 9
    GAP (Grid Agents Platform) Toolkit for Modeling and Simulation of Mobile Agents in Grid Environments. GAP is an abstraction over GridSim, a Grid Simulation Toolkit for Resource Modelling and Application Scheduling for Parallel and Distributed Computing.
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