Showing 35 open source projects for "research"

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  • 1
    Systems Biology Markup Language (SBML)

    Systems Biology Markup Language (SBML)

    A file format for exchanging computational models in systems biology

    The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.
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    Downloads: 37 This Week
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  • 2
    Phenoscape
    The Phenoscape project attempts to formalize the description of evolutionary characters to make them interoperable and computable with the body of phenotype annotation being generated by model organism databases, and other biomedical research.
    Downloads: 0 This Week
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  • 3

    BioC

    We describe a simple XML format to share text documents and annotation

    A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are...
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    Downloads: 26 This Week
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  • 4
    BenchLab is a Web Application benchmarking framework using real web browsers.
    Downloads: 32 This Week
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  • 5
    CanReg5 (moved to Github)

    CanReg5 (moved to Github)

    Canreg5 is a software package for population based cancer registries

    Cancer registries need a tool to input, store, check and analyse their data. If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry,...
    Downloads: 2 This Week
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  • 6
    CRAFT HPC Floating-point Analysis

    CRAFT HPC Floating-point Analysis

    CRAFT: Configurable Runtime Analysis for Floating-point Tuning

    CRAFT (Configurable Runtime Analysis for Floating-point Tuning) for HPC (High-Performance Computing) uses binary instrumentation to perform runtime analysis of floating-point code, detecting cancellations and making precision level recommendations. NOTE: THIS PROJECT HAS MOVED TO GITHUB!!!! https://github.com/crafthpc/craft
    Downloads: 0 This Week
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  • 7

    Liferay for Virgo

    The research of an ability to port Liferay to Virgo

    This project is a result of my tries to port Liferay portal Community Edition to Virgo. I have done this work in the research purpose to analyze an ability of development a serious mass enterprise system on very perspective and great Virgo platform couple with the most powerful open source portal Liferay. My theoretical research has pointed these two product like the most perspective flexible and multi functional solutions matching my aims very well. But practically Virgo has turned out inapplicable for my tasks for a lot of different reasons (low performance, inconvenient migration process, poor environment, not enough functionality of tools, low robust, poor documentation and etc.) ...
    Downloads: 0 This Week
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  • 8
    P53 Cancer Rescue Project, University of California, Irvine , Samuel A. Danziger, Christopher Wassman, Faezeh Salehi Amiri, Roberta Baronio, Linda Hall, Rainer K. Brachmann, G. Wesley Hatfield, Peter Kaiser, Richard H. Lathrop
    Downloads: 22 This Week
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  • 9
    GRAIL Real Time Location Service (RTLS)
    Downloads: 6 This Week
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  • 10
    Gavrog stands for "Generation, Analysis and Visualization of Reticular Ornaments using Gavrog". It is a Java library together with a suite of interactive applications for the study of periodic net-like structures in space and their applications.
    Downloads: 2 This Week
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  • 11
    Using encryption to secure your code or text. Click File->Run to run your code using Ruby, see the pop up for output. Never save your text or code to disk unencrypted. Don't forget your password. Encryption is error-persistent.
    Downloads: 0 This Week
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  • 12
    Lioness (Languages Interop Framework)
    Framework for making Windows applications that are one .exe file in AutoHotKey_L,C++,C#, VB.NET,Java,Groovy,Common Lisp,Nemerle,Ruby,Python,PHP,Lua,Tcl,Perl,Jint,S#,WSH VBScript,HTML/JavaScript/CSS,COM, PowerShell without compiling . For .NET 4.
    Downloads: 0 This Week
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  • 13
    Object oriented reusable software classes designed to be used to construct larger software projects developed in multiple software languages.
    Downloads: 1 This Week
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  • 14
    Object oriented software classes and programs implemented in multiple software languages for biological informatics and bioinformatics applications.
    Downloads: 0 This Week
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  • 15
    Mahatma68k is a free/Open Source emulator library for the legendary Motorola 68000 CPU written for the Java virtual machine.
    Downloads: 0 This Week
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  • 16
    PORIS toolkit allows describing graph-based systems and their behavior in a snapshot. It provides a web editor for a domain visual specific language (DSL) and transformation tools to generate software prototypes, system configurations, ...
    Downloads: 0 This Week
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  • 17
    GEEP (Group Experiment Environment Project) is a research project focused on emergent group behavior. A suite of games accessible through a common Web interface allow visitors to compete against each other, providing anonymous data for later analysis.
    Downloads: 0 This Week
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  • 18
    Patacritism is a project to develop interpretive tools for online humanities.
    Downloads: 0 This Week
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  • 19
    This is a recopilation of programs programmed by Eliot Hijano using either Java or Ruby. All the programs have something in common with both physics and Maths and are explained mathematically and physically in its own pdf.
    Downloads: 0 This Week
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  • 20
    This project automates Http-requests i.e. all browser activities can be logged/written to XML-formated files and redone by using simple methods. This is very useful for automating http-server-requests e.g. queries to search engines, external databases..
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    Downloads: 0 This Week
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  • 21
    JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts
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    Downloads: 1 This Week
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  • 22
    Spamato is a spam filter system that combines several anti-spam techniques, from which thousands of users benefit. It is available as an add-on for Thunderbird and Outlook, and as a stand-alone proxy for other email clients. IMAP and POP are supported.
    Downloads: 0 This Week
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  • 23
    A modular extensible network protocol for general-purpose communication between a generic client and generic server housing various modules.
    Downloads: 0 This Week
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  • 24
    Design and develop Recommendation and Adaptive Prediction Engines to address eCommerce opportunities. Build a portfolio of engines by creating and porting algorithms from multiple disciplines to a usable form. Try to solve NetFlix and other challenges.
    Downloads: 0 This Week
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  • 25
    OAproject implements a plataform to allow applications to interact. Apps using the platform send/receive messages through a message oriented middleware. Main features are a Single Sign On (SSO), Identity Management System (IMS) and a provisioning system
    Downloads: 0 This Week
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