Search Results for "artificial intelligence algorithm"
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Showing 25 open source projects for "artificial intelligence algorithm"
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CometAnalyser
CometAnalyser, for quantitative comet assay analysis.
Description: Comet assay provides an easy solution to estimate DNA damage in single cells through microscopy assessment. To obtain reproducible and reliable quantitative data, we developed an easy-to-use tool named CometAnalyser. CometAnalyser is an open-source deep-learning tool designed for the analysis of both fluorescent and silver-stained wide-field microscopy images. Once the comets are segmented and classified, several intensity/morphological features are automatically exported as a... -
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Spheroid_segmentation
Deep learning networks for spheroid segmentation
To accelerate the analysis of tumors' spheroids, different deep learning networks were trained to automatize the segmentation process. The code provides the trained networks based on Vgg16, Vgg19, ResNet18, and ResNet50 ready to be used for segmentation purposes. It also provides Matlab functions ready to be used to train new networks, segment new images, and measure the quality of the training using different quantitative parameters. -
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ANDTool
Analysis Nuclei DAB (AND) Tool
Analysis Nuclei DAB (AND) Tool is a Graphical User Interface (GUI) to analyse microscopy images representing cells with nuclei stained using DAB dyes. The tool requires as input the original RGB images, and the FastRed, FastBlue, DAB channel, easily obtained using the Fiji function: "ImageJ" -> "Image" -> "Colour Deconvolution" -> "FastRed FastBlue DAB" Then, the tool first segment the nuclei using the FastBlue channel and the DAB channel, and then computes statistics by subdividing... -
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BioRec:Bird Census field data annotation
Recognizing biological data from a notebook.
This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis. -
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Density-ratio based clustering
Discovering clusters with varying densities
This site provides the source code of two approaches for density-ratio based clustering, used for discovering clusters with varying densities. One approach is to modify a density-based clustering algorithm to do density-ratio based clustering by using its density estimator to compute density-ratio. The other approach involves rescaling the given dataset only. An existing density-based clustering algorithm, which is applied to the rescaled dataset, can find all clusters with varying... -
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Mass-based dissimilarity
A data dependent dissimilarity measure based on mass estimation.
This software calculates the mass-based dissimilarity matrix for data mining algorithms relying on a distance measure. References: Overcoming Key Weaknesses of Distance-based Neighbourhood Methods using a Data Dependent Dissimilarity Measure. KDD 2016 http://dx.doi.org/10.1145/2939672.2939779 The source code, presentation slide and poster are attached under "Files". The presentation video in KDD 2016 is published on https://youtu.be/eotD_-SuEoo . Since this software is licensed... -
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JAABA
The Janelia Automated Animal Behavior Annotator
The Janelia Automatic Animal Behavior Annotator (JAABA) is a machine learning-based system that enables researchers to automatically compute interpretable, quantitative statistics describing video of behaving animals. Through our system, users encode their intuition about the structure of behavior by labeling the behavior of the animal, e.g. walking, grooming, or following, in a small set of video frames. JAABA uses machine learning techniques to convert these manual labels into behavior... -
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mVision library is a set of functions related with computer vision programmed in Matlab. Also include a couple of GUIs for test visually the functions.
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lonestar
A feature selection and classification algorithm based on L1 Norm SVM
A feature selection and classification algorithm. It is based on L1 Norm Support Vector Machine with t-test and Recursive Feature Elimination. -
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ECOC PAK is a C++ Library for the Error Correcting Output Codes classification framework. It supports several coding and decoding strategies as well as several classifiers.
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NeMo is a high-performance spiking neural network simulator which simulates networks of Izhikevich neurons on CUDA-enabled GPUs. NeMo is a C++ class library, with additional interfaces for pure C, Python, and Matlab.
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DOGMA is a MATLAB toolbox for discriminative online learning. It implements all the state of the art algorithms in a unique and simple framework. Examples are Perceptron, Passive-Aggresive, ALMA, NORMA, SILK, Projectron, RBP, Banditron, etc.
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This project is devoted to the creation of an open source Error-Correcting Output Codes (ECOC) library for the Machine Learning community. The ECOC framework is a powerful tool to deal with multi-class categorization problems.
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A neural network package for Octave! Goal is to be as compatible as possible to the one of MATLAB(TM).
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Projeny (Probablistic Networks Generator in Java) is a graphical (Java SWT) front-end to BNT (Bayes Net Toolbox for Matlab). Projeny requires BNT, JMatLink and a Matlab back-end. There is no installable release package, but source code is available on SVN - please check out from SVN to use Projeny. Projeny was started with BNJ as the base.
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mex-svm is a set of patches against SVM-Light to compile into "mex" libraries and enable fast Support Vector Machine evaluation from within MATLAB.
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MILT is designed to facilitate research in imitation learning through first-person computer games. Featuring strategic, tactical and reactive modules, it allows developers to work with their preferred games or take advantage of integrated Quake2 support.
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Bayesian Surprise Matlab toolkit is a basic toolkit for computing Bayesian surprise values given a large set of input samples. It is also useful as way of exploring surprise theory. For more information see also: http://ilab.usc.edu/
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neuro fuzzy net: 1. Object oriented Programming! 2. matlab project with back propagation, and hibrid learning. 3. Can use to MLP or ANFIS Sugeno modelling. 4. Integrated with Simulink (Sfunction M) by any questions mail me : tsepkovsky@yandex.ru
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mlearn is a gradient based learning toolbox for matlab. While it is fairly simple to build a neural network, it is designed for ease of implementing new kind of gradient based architecture.
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URBI: Universal Robotic Body Interface. URBI is a scripted command language used to control robots (AIBO, pioneer,...). It is a robot-independant API based on a client/server architecture. Liburbi C++/Java/Matlab are available here. Forum available at ht
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MPT is a toolbox that supplies cross-platform libraries for real-time perception primitives, including face detection, eye detection, blink detection, and color tracking.
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