go.mod

module github.com/shenwei356/LexicMap

go 1.22

toolchain go1.22.6

// replace github.com/shenwei356/lexichash => /home/shenwei/go/src/github.com/shenwei356/lexichash/
// replace github.com/shenwei356/wfa => /home/shenwei/go/src/github.com/shenwei356/wfa/

require (
	github.com/dustin/go-humanize v1.0.1
	github.com/iafan/cwalk v0.0.0-20210125030640-586a8832a711
	github.com/klauspost/pgzip v1.2.6
	github.com/mattn/go-colorable v0.1.13
	github.com/mitchellh/go-homedir v1.1.0
	github.com/pelletier/go-toml/v2 v2.1.1
	github.com/pkg/errors v0.9.1
	github.com/rdleal/intervalst v1.3.0
	github.com/shenwei356/bio v0.13.6
	github.com/shenwei356/go-logging v0.0.0-20171012171522-c6b9702d88ba
	github.com/shenwei356/kmers v0.1.0
	github.com/shenwei356/lexichash v0.5.0
	github.com/shenwei356/util v0.5.2
	github.com/shenwei356/wfa v0.4.0
	github.com/shenwei356/xopen v0.3.2
	github.com/spf13/cobra v1.8.0
	github.com/twotwotwo/sorts v0.0.0-20160814051341-bf5c1f2b8553
	github.com/vbauerster/mpb/v8 v8.7.2
	github.com/zeebo/wyhash v0.0.1
	gonum.org/v1/gonum v0.14.0
	gonum.org/v1/plot v0.14.0
)

require (
	git.sr.ht/~sbinet/gg v0.5.0 // indirect
	github.com/VividCortex/ewma v1.2.0 // indirect
	github.com/acarl005/stripansi v0.0.0-20180116102854-5a71ef0e047d // indirect
	github.com/ajstarks/svgo v0.0.0-20211024235047-1546f124cd8b // indirect
	github.com/campoy/embedmd v1.0.0 // indirect
	github.com/dsnet/compress v0.0.1 // indirect
	github.com/elliotwutingfeng/asciiset v0.0.0-20230602022725-51bbb787efab // indirect
	github.com/go-fonts/liberation v0.3.1 // indirect
	github.com/go-latex/latex v0.0.0-20230307184459-12ec69307ad9 // indirect
	github.com/go-pdf/fpdf v0.8.0 // indirect
	github.com/golang/freetype v0.0.0-20170609003504-e2365dfdc4a0 // indirect
	github.com/inconshreveable/mousetrap v1.1.0 // indirect
	github.com/klauspost/compress v1.17.3 // indirect
	github.com/kr/text v0.2.0 // indirect
	github.com/mattn/go-isatty v0.0.16 // indirect
	github.com/mattn/go-runewidth v0.0.15 // indirect
	github.com/pmezard/go-difflib v1.0.0 // indirect
	github.com/rivo/uniseg v0.4.4 // indirect
	github.com/rogpeppe/go-internal v1.12.0 // indirect
	github.com/shenwei356/breader v0.3.2 // indirect
	github.com/shenwei356/natsort v0.0.0-20190418160752-600d539c017d // indirect
	github.com/spf13/pflag v1.0.5 // indirect
	github.com/ulikunitz/xz v0.5.11 // indirect
	golang.org/x/image v0.18.0 // indirect
	golang.org/x/sys v0.16.0 // indirect
	golang.org/x/text v0.16.0 // indirect
)