Submission of naijR 0.6.1 for review under the rOpenSci Champions Program

[BroVic]

Date accepted: 2023-12-02

Submitting Author Name: Victor Ordu
Submitting Author Github Handle: @BroVic

Other Package Authors Github handles: (comma separated, delete if none)
Repository: https://github.com/BroVic/naijR

Version submitted: 0.6.1

Submission type: Standard

Editor: @emilyriederer

Reviewers: @mcsiple, @cagrigokcek

Archive: TBD
Version accepted: TBD
Language: en

---

• Paste the full DESCRIPTION file inside a code block below:

Package: naijR
Type: Package
Title: Operations to Ease Data Analyses Specific to Nigeria
Version: 0.6.1
Depends: R (>= 3.6)
Imports:
    RColorBrewer (>= 1.1.2),
    cli (>= 3.6.0),
    lifecycle (>= 0.2.0),
    grDevices,
    graphics,
    mapdata (>= 2.3.0),
    maps (>= 3.3.0),
    rlang (>= 0.4.0),
    sf (>= 1.0.13),
    stats,
    stringi (>= 1.7.6),
    utils
Suggests: 
    ISOcodes,
    covr,
    here,
    knitr,
    purrr,
    readxl,
    rmarkdown,
    testthat (>= 3.0.0),
    usethis
Authors@R: person("Victor", "Ordu", 
              email = "victorordu@outlook.com",
              role = c("aut", "cre"),
              comment = c(ORCID = "0000-0003-3716-0668"))
Description: A set of convenience functions as well as geographical/political
  data about Nigeria, aimed at simplifying work with data and information that
  are specific to the country.
License: GPL-3
LazyData: TRUE
Encoding: UTF-8
RoxygenNote: 7.2.3
VignetteBuilder: knitr
RdMacros: lifecycle
URL: https://brovic.github.io/naijR/
BugReports: https://github.com/BroVic/naijR/issues
Config/testthat/edition: 3

Scope

• Please indicate which category or categories from our package fit policies this package falls under: (Please check an appropriate box below. If you are unsure, we suggest you make a pre-submission inquiry.):

  • data retrieval
  • data extraction
  • data munging
  • data deposition
  • data validation and testing
  • workflow automation
  • version control
  • citation management and bibliometrics
  • scientific software wrappers
  • field and lab reproducibility tools
  • database software bindings
  • geospatial data
  • text analysis

• Explain how and why the package falls under these categories (briefly, 1-2 sentences):
  naijR is an R package that contains a suite of functions that make it easier to deal with data and datasets about the country Nigeria and its constituent parts.

• Who is the target audience and what are scientific applications of this package?
  Anyone needing Nigerian geospatial data.

• Are there other R packages that accomplish the same thing? If so, how does yours differ or meet our criteria for best-in-category?
  Not to my knowledge.

• (If applicable) Does your package comply with our guidance around Ethics, Data Privacy and Human Subjects Research?
  Yes

• If you made a pre-submission inquiry, please paste the link to the corresponding issue, forum post, or other discussion, or @tag the editor you contacted.

• Explain reasons for any pkgcheck items which your package is unable to pass.

Technical checks

Confirm each of the following by checking the box.

• I have read the rOpenSci packaging guide.
• I have read the author guide and I expect to maintain this package for at least 2 years or to find a replacement.

This package:

• does not violate the Terms of Service of any service it interacts with.
• has a CRAN and OSI accepted license.
• contains a README with instructions for installing the development version.
• includes documentation with examples for all functions, created with roxygen2.
• contains a vignette with examples of its essential functions and uses.
• has a test suite.
• has continuous integration, including reporting of test coverage.

Publication options

• Do you intend for this package to go on CRAN?

• Do you intend for this package to go on Bioconductor?

• Do you wish to submit an Applications Article about your package to Methods in Ecology and Evolution? If so:

MEE Options

• The package is novel and will be of interest to the broad readership of the journal.
• The manuscript describing the package is no longer than 3000 words.
• You intend to archive the code for the package in a long-term repository which meets the requirements of the journal (see MEE's Policy on Publishing Code)
• (Scope: Do consider MEE's Aims and Scope for your manuscript. We make no guarantee that your manuscript will be within MEE scope.)
• (Although not required, we strongly recommend having a full manuscript prepared when you submit here.)
• (Please do not submit your package separately to Methods in Ecology and Evolution)

Code of conduct

• I agree to abide by rOpenSci's Code of Conduct during the review process and in maintaining my package should it be accepted.

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Checks for naijR (v0.6.1)

git hash: ec9bffb5

• ✔️ Package is already on CRAN.
• ✖️ does not have a 'codemeta.json' file.
• ✖️ does not have a 'contributing' file.
• ✖️ The following function has no documented return value: [fix_region_manual]
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✖️ These functions do not have examples: [fix_mobile, fix_region_manual, is_lga].
• ✔️ Package has continuous integration checks.
• ✖️ Package coverage is 70.1% (should be at least 75%).
• ✔️ R CMD check found no errors.
• ✔️ R CMD check found no warnings.
• 👀 Function names are duplicated in other packages

Important: All failing checks above must be addressed prior to proceeding

(Checks marked with 👀 may be optionally addressed.)

Package License: GPL-3

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	base	217
internal	naijR	52
internal	methods	6
imports	cli	71
imports	graphics	16
imports	utils	16
imports	stats	11
imports	grDevices	10
imports	lifecycle	9
imports	rlang	6
imports	maps	3
imports	sf	3
imports	RColorBrewer	NA
imports	mapdata	NA
imports	stringi	NA
suggests	ISOcodes	NA
suggests	covr	NA
suggests	here	NA
suggests	knitr	NA
suggests	purrr	NA
suggests	readxl	NA
suggests	rmarkdown	NA
suggests	testthat	NA
suggests	usethis	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

paste (17), list (16), c (11), attr (9), if (9), length (9), unlist (7), character (6), plot (6), sub (6), vapply (6), which (6), col (5), grep (5), names (5), for (4), grepl (4), paste0 (4), data.frame (3), ls (3), match (3), sprintf (3), sum (3), any (2), as.character (2), as.data.frame (2), attributes (2), class (2), duplicated (2), integer (2), interactive (2), lapply (2), logical (2), mapply (2), nchar (2), sapply (2), sort (2), sQuote (2), strrep (2), substitute (2), try (2), agrep (1), as.list (1), as.vector (1), charToRaw (1), deparse (1), eval (1), get (1), getOption (1), identical (1), inherits (1), is.character (1), is.data.frame (1), is.factor (1), is.null (1), is.numeric (1), labels (1), levels (1), match.arg (1), mode (1), ngettext (1), quit (1), range (1), seq_along (1), setdiff (1), stop (1), switch (1), sys.calls (1), typeof (1), unclass (1), unique (1), unname (1)

cli

cli_abort (53), cli_warn (18)

naijR

lgas (12), states (5), lgas_like_states (4), f (3), get_all_states (3), is_state (3), check_nesting_func (2), country_name (2), is_lga (2), stateList (2), as_lga (1), as_state (1), c.regions (1), disambiguate_lga (1), doOneMap (1), findStates (1), fix_mobile (1), fix_region (1), fix_region_manual (1), fix_region.default (1), fix_region.states (1), get_proper_value (1), head.regions (1), map_ng (1)

graphics

title (8), text (7), legend (1)

utils

data (6), str (6), menu (2), packageVersion (1), prompt (1)

stats

df (3), dt (3), stl (3), na.exclude (2)

grDevices

colors (9), palette (1)

lifecycle

deprecate_warn (3), deprecated (3), is_present (3)

methods

show (6)

rlang

is_null (3), expr (1), is_symbol (1), warn (1)

maps

map (3)

sf

st_as_text (1), st_bbox (1), st_centroid (1)

NOTE: Some imported packages appear to have no associated function calls; please ensure with author that these 'Imports' are listed appropriately.

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (100% in 13 files) and
• 1 authors
• 2 vignettes
• 2 internal data files
• 12 imported packages
• 18 exported functions (median 20 lines of code)
• 172 non-exported functions in R (median 7 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	13	68.2
files_vignettes	2	85.7
files_tests	7	86.4
loc_R	1330	75.4
loc_vignettes	177	45.0
loc_tests	922	85.8
num_vignettes	2	89.2
data_size_total	4821	67.1
data_size_median	2410	69.8
n_fns_r	190	89.0
n_fns_r_exported	18	64.2
n_fns_r_not_exported	172	91.8
n_fns_per_file_r	9	85.5
num_params_per_fn	2	11.9
loc_per_fn_r	8	20.0
loc_per_fn_r_exp	20	48.3
loc_per_fn_r_not_exp	8	22.0
rel_whitespace_R	48	91.7
rel_whitespace_vignettes	39	50.4
rel_whitespace_tests	21	84.8
doclines_per_fn_exp	46	57.9
doclines_per_fn_not_exp	0	0.0	TRUE
fn_call_network_size	162	86.1

---

2a. Network visualisation

Click to see the interactive network visualisation of calls between objects in package

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

GitHub Workflow Results

id	name	conclusion	sha	run_number	date
5848527475	pages build and deployment	success	ec9bff	16	2023-08-13
5848527510	R-CMD-check	success	ec9bff	150	2023-08-13

---

3b. goodpractice results

R CMD check with rcmdcheck

R CMD check generated the following note:

1. checking R/sysdata.rda ... NOTE

Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
sysdata.rda 1.2Mb 780Kb xz

R CMD check generated the following check_fails:

1. no_import_package_as_a_whole
2. rcmdcheck_uncompressed_sysdata

Test coverage with covr

Package coverage: 70.12

Cyclocomplexity with cyclocomp

The following functions have cyclocomplexity >= 15:

function	cyclocomplexity
map_ng	43
lgas	22
states	21

Static code analyses with lintr

lintr found the following 9 potential issues:

message	number of times
Avoid library() and require() calls in packages	5
Avoid using sapply, consider vapply instead, that's type safe	3
Lines should not be more than 80 characters.	1

---

4. Other Checks

Details of other checks (click to open)

✖️ The following function name is duplicated in other packages:

• • states from aphylo, clickstream, datafsm, markovchain, pop, rEMM, segclust2d, tigris

---

Package Versions

package	version
pkgstats	0.1.3.4
pkgcheck	0.1.2.1

---

Editor-in-Chief Instructions:

Processing may not proceed until the items marked with ✖️ have been resolved.

[BroVic]

@ropensci-review-bot check package

[ropensci-review-bot]

Thanks, about to send the query.

[ropensci-review-bot]

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Editor check started

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[ropensci-review-bot]

Checks for naijR (v0.6.1)

git hash: 8ccaf792

• ✔️ Package is already on CRAN.
• ✔️ has a 'codemeta.json' file.
• ✔️ has a 'contributing' file.
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✔️ Package has continuous integration checks.
• ✖️ Package coverage is 72% (should be at least 75%).
• ✔️ R CMD check found no errors.
• ✔️ R CMD check found no warnings.
• 👀 Function names are duplicated in other packages

Important: All failing checks above must be addressed prior to proceeding

(Checks marked with 👀 may be optionally addressed.)

Package License: GPL-3

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	base	219
internal	naijR	54
internal	methods	6
imports	cli	71
imports	graphics	15
imports	utils	15
imports	grDevices	10
imports	lifecycle	9
imports	stats	7
imports	rlang	6
imports	maps	3
imports	sf	3
imports	RColorBrewer	NA
imports	mapdata	NA
imports	stringi	NA
suggests	ISOcodes	NA
suggests	covr	NA
suggests	here	NA
suggests	knitr	NA
suggests	purrr	NA
suggests	readxl	NA
suggests	rmarkdown	NA
suggests	testthat	NA
suggests	usethis	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

list (16), paste (16), c (11), length (10), attr (9), if (9), unlist (7), which (7), character (6), sub (6), vapply (6), col (5), grep (5), names (5), plot (5), for (4), grepl (4), paste0 (4), data.frame (3), interactive (3), ls (3), sprintf (3), substitute (3), sum (3), any (2), as.character (2), as.data.frame (2), attributes (2), class (2), deparse (2), duplicated (2), integer (2), lapply (2), logical (2), mapply (2), match (2), nchar (2), sapply (2), sQuote (2), strrep (2), try (2), agrep (1), as.list (1), as.vector (1), charToRaw (1), eval (1), get (1), getOption (1), identical (1), inherits (1), is.character (1), is.data.frame (1), is.factor (1), is.null (1), is.numeric (1), labels (1), levels (1), match.arg (1), mode (1), ngettext (1), quit (1), range (1), seq_along (1), setdiff (1), sort (1), split (1), stop (1), switch (1), sys.calls (1), typeof (1), unclass (1), unique (1), unname (1)

cli

cli_abort (52), cli_warn (19)

naijR

lgas (11), states (5), get_all_states (4), lgas_like_states (4), f (3), is_state (3), arg_str (2), check_nesting_func (2), country_name (2), is_lga (2), as_lga (1), as_state (1), assert.lgl.arg (1), c.regions (1), disambiguate_lga (1), doOneMap (1), findStates (1), first_elem_warn (1), fix_mobile (1), fix_region (1), fix_region_manual (1), fix_region.default (1), fix_region.states (1), get_proper_value (1), head.regions (1), lgas_ng (1)

graphics

text (7), title (7), legend (1)

utils

data (6), str (6), menu (2), packageVersion (1)

grDevices

colors (9), palette (1)

lifecycle

deprecate_warn (3), deprecated (3), is_present (3)

stats

df (3), dt (2), na.exclude (2)

methods

show (6)

rlang

is_null (3), expr (1), is_symbol (1), warn (1)

maps

map (3)

sf

st_as_text (1), st_bbox (1), st_centroid (1)

NOTE: Some imported packages appear to have no associated function calls; please ensure with author that these 'Imports' are listed appropriately.

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (100% in 17 files) and
• 1 authors
• 2 vignettes
• 2 internal data files
• 12 imported packages
• 18 exported functions (median 20 lines of code)
• 172 non-exported functions in R (median 7 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	17	76.7
files_vignettes	2	85.7
files_tests	7	86.4
loc_R	1331	75.4
loc_vignettes	177	45.0
loc_tests	948	86.1
num_vignettes	2	89.2
data_size_total	4821	67.1
data_size_median	2410	69.8
n_fns_r	190	89.0
n_fns_r_exported	18	64.2
n_fns_r_not_exported	172	91.8
n_fns_per_file_r	7	77.7
num_params_per_fn	2	11.9
loc_per_fn_r	8	20.0
loc_per_fn_r_exp	20	46.7
loc_per_fn_r_not_exp	7	18.0
rel_whitespace_R	46	91.3
rel_whitespace_vignettes	39	50.4
rel_whitespace_tests	22	85.6
doclines_per_fn_exp	46	57.9
doclines_per_fn_not_exp	0	0.0	TRUE
fn_call_network_size	163	86.2

---

2a. Network visualisation

Click to see the interactive network visualisation of calls between objects in package

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

GitHub Workflow Results

id	name	conclusion	sha	run_number	date
5890683643	pages build and deployment	success	8ccaf7	17	2023-08-17
5890683746	R-CMD-check	success	8ccaf7	159	2023-08-17

---

3b. goodpractice results

R CMD check with rcmdcheck

R CMD check generated the following check_fail:

1. no_import_package_as_a_whole

Test coverage with covr

Package coverage: 71.96

Cyclocomplexity with cyclocomp

The following functions have cyclocomplexity >= 15:

function	cyclocomplexity
map_ng	43
lgas	22
states	19
fix_region.lgas	15

Static code analyses with lintr

lintr found the following 8 potential issues:

message	number of times
Avoid library() and require() calls in packages	5
Avoid using sapply, consider vapply instead, that's type safe	3

---

4. Other Checks

Details of other checks (click to open)

✖️ The following function name is duplicated in other packages:

• • states from aphylo, clickstream, datafsm, markovchain, pop, rEMM, segclust2d, tigris

---

Package Versions

package	version
pkgstats	0.1.3.4
pkgcheck	0.1.2.1

---

Editor-in-Chief Instructions:

Processing may not proceed until the items marked with ✖️ have been resolved.

[BroVic]

@ropensci-review-bot check package

[ropensci-review-bot]

Thanks, about to send the query.

[ropensci-review-bot]

🚀

Editor check started

👋

[ropensci-review-bot]

Checks for naijR (v0.6.1)

git hash: 5d70cafd

• ✔️ Package is already on CRAN.
• ✔️ has a 'codemeta.json' file.
• ✔️ has a 'contributing' file.
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✔️ Package has continuous integration checks.
• ✔️ Package coverage is 79.3%.
• ✔️ R CMD check found no errors.
• ✔️ R CMD check found no warnings.
• 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: GPL-3

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	base	219
internal	naijR	53
internal	methods	6
imports	cli	72
imports	graphics	15
imports	utils	15
imports	grDevices	10
imports	stats	7
imports	rlang	6
imports	maps	3
imports	sf	3
imports	RColorBrewer	NA
imports	lifecycle	NA
imports	mapdata	NA
imports	stringi	NA
suggests	ISOcodes	NA
suggests	covr	NA
suggests	here	NA
suggests	knitr	NA
suggests	purrr	NA
suggests	readxl	NA
suggests	rmarkdown	NA
suggests	testthat	NA
suggests	usethis	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

list (16), paste (16), c (11), length (10), attr (9), if (9), unlist (7), which (7), character (6), sub (6), vapply (6), col (5), grep (5), names (5), plot (5), for (4), grepl (4), paste0 (4), data.frame (3), interactive (3), ls (3), sprintf (3), substitute (3), sum (3), any (2), as.character (2), as.data.frame (2), attributes (2), class (2), deparse (2), duplicated (2), integer (2), lapply (2), logical (2), mapply (2), match (2), nchar (2), sapply (2), sQuote (2), strrep (2), try (2), agrep (1), as.list (1), as.vector (1), charToRaw (1), eval (1), get (1), getOption (1), identical (1), inherits (1), is.character (1), is.data.frame (1), is.factor (1), is.null (1), is.numeric (1), labels (1), levels (1), match.arg (1), mode (1), ngettext (1), quit (1), range (1), seq_along (1), setdiff (1), sort (1), split (1), stop (1), switch (1), sys.calls (1), typeof (1), unclass (1), unique (1), unname (1)

cli

cli_abort (53), cli_warn (19)

naijR

lgas (11), states (5), get_all_states (4), lgas_like_states (4), f (3), is_state (3), arg_str (2), check_nesting_func (2), country_name (2), is_lga (2), as_lga (1), as_state (1), assert.lgl.arg (1), c.regions (1), disambiguate_lga (1), doOneMap (1), findStates (1), first_elem_warn (1), fix_mobile (1), fix_region (1), fix_region_manual (1), fix_region.default (1), fix_region.states (1), get_proper_value (1), head.regions (1)

graphics

text (7), title (7), legend (1)

utils

data (6), str (6), menu (2), packageVersion (1)

grDevices

colors (9), palette (1)

stats

df (3), dt (2), na.exclude (2)

methods

show (6)

rlang

is_null (3), expr (1), is_symbol (1), warn (1)

maps

map (3)

sf

st_as_text (1), st_bbox (1), st_centroid (1)

NOTE: Some imported packages appear to have no associated function calls; please ensure with author that these 'Imports' are listed appropriately.

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2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (100% in 17 files) and
• 1 authors
• 2 vignettes
• 2 internal data files
• 12 imported packages
• 17 exported functions (median 20 lines of code)
• 171 non-exported functions in R (median 7 lines of code)

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Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	17	76.7
files_vignettes	2	85.7
files_tests	7	86.4
loc_R	1321	75.2
loc_vignettes	177	45.0
loc_tests	962	86.3
num_vignettes	2	89.2
data_size_total	4821	67.1
data_size_median	2410	69.8
n_fns_r	188	88.8
n_fns_r_exported	17	62.4
n_fns_r_not_exported	171	91.7
n_fns_per_file_r	7	77.4
num_params_per_fn	2	11.9
loc_per_fn_r	8	20.0
loc_per_fn_r_exp	20	46.7
loc_per_fn_r_not_exp	7	18.0
rel_whitespace_R	45	91.1
rel_whitespace_vignettes	39	50.4
rel_whitespace_tests	21	85.3
doclines_per_fn_exp	46	58.1
doclines_per_fn_not_exp	0	0.0	TRUE
fn_call_network_size	156	85.6

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2a. Network visualisation

Click to see the interactive network visualisation of calls between objects in package

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3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

GitHub Workflow Results

id	name	conclusion	sha	run_number	date
5905586565	pages build and deployment	success	5d70ca	18	2023-08-18
5905586586	R-CMD-check	success	5d70ca	163	2023-08-18

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3b. goodpractice results

R CMD check with rcmdcheck

R CMD check generated the following check_fail:

1. no_import_package_as_a_whole

Test coverage with covr

Package coverage: 79.29

Cyclocomplexity with cyclocomp

The following functions have cyclocomplexity >= 15:

function	cyclocomplexity
map_ng	40
lgas	22
states	19
fix_region.lgas	15

Static code analyses with lintr

lintr found the following 5 potential issues:

message	number of times
Avoid library() and require() calls in packages	2
Avoid using sapply, consider vapply instead, that's type safe	3

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4. Other Checks

Details of other checks (click to open)

✖️ The following function name is duplicated in other packages:

• • states from aphylo, clickstream, datafsm, markovchain, pop, rEMM, segclust2d, tigris

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Package Versions

package	version
pkgstats	0.1.3.4
pkgcheck	0.1.2.1

---

Editor-in-Chief Instructions:

This package is in top shape and may be passed on to a handling editor

[noamross]

@ropensci-review-bot assign @emilyriederer as editor

[ropensci-review-bot]

Assigned! @emilyriederer is now the editor