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Commits on Sep 16, 2024

• Allow Reader/Writer to be context managers (#311)

  esrice

  authored
  541ab16

Commits on Jun 18, 2024

• bump

  brentp

  committed
  8624896

• remove pin on python versions for newest numpy test

  

  aryarm

  authored and

  brentp

  committed
  5a4ab81

• add notes about keeping the lowest supported numpy version in sync with the CI

  

  aryarm

  authored and

  brentp

  committed
  1c2f6fe

• lower numpy requirement to 1.16 since that's the oldest version that works with py3.7

  

  aryarm

  authored and

  brentp

  committed
  22ccd3e

• try lowering numpy runtime requirement

  

  aryarm

  authored and

  brentp

  committed
  d2371b1

• only run old numpy test with old python

  

  aryarm

  authored and

  brentp

  committed
  26d20c9

• also test newest numpy

  

  aryarm

  authored and

  brentp

  committed
  31273f5

• test with oldest supported runtime numpy

  

  aryarm

  authored and

  brentp

  committed
  d8e0ea2

Commits on Jun 17, 2024

• add numpy 2 stuff to reqs.txt #307

  brentp

  committed
  c67d43a

• update pyproject.toml for numpy 2.0.0 #307

  brentp

  committed
  8542378

• attempted fix for #307 from @aryarm

  brentp

  committed
  aeb6733

Commits on May 25, 2024

• bump version with osx wheels fix for ci

  brentp

  committed
  0143cb1

• pin pytest version on sdist job.

  

  graphenn

  authored and

  brentp

  committed
  dec3fb1

• use macos-14 as macos arm build runner.

  

  graphenn

  authored and

  brentp

  committed
  b0267cb

Commits on Jan 30, 2024

• bump version

  brentp

  committed
  70cc9b3

• Update actions to avoid upload action deprecated warnings regarding Node.js 20. Skip macos arm64 test.

  

  graphenn

  authored and

  brentp

  committed
  4f744ea

• Fix missing macOS arm64 support.

  

  graphenn

  authored and

  brentp

  committed
  6fb4624

Commits on Jan 19, 2024

• bump version

  brentp

  committed
  45e3f2c

• dont remove htslib/config.status

  brentp

  committed
  b2636aa

• Fixup pxd definitions for tbx_t struct

  

  jeromekelleher

  authored and

  brentp

  committed
  5d5c6bd

• Refactor open_index out of seqnames and num_records

  

  jeromekelleher

  authored and

  brentp

  committed
  61690b4

• Complete testing for num_records

  

  jeromekelleher

  authored and

  brentp

  committed
  8b5e1c0

• Fix memory leak in set_index

  

  jeromekelleher

  authored and

  brentp

  committed
  5c81a7a

• Add indexed multi-config VCF and BCF

  

  jeromekelleher

  authored and

  brentp

  committed
  a1952d2

• Basic implementation of num_records

  

  jeromekelleher

  authored and

  brentp

  committed
  4659f50

• Fix compiler warnings

  

  jeromekelleher

  authored and

  brentp

  committed
  b8196d3

Commits on Jan 11, 2024

• Introduction for pip install and windows (#293)

  graphenn

  authored
  8f9dfdc

Commits on Jan 10, 2024

• bump version

  brentp

  committed
  3c73198

Commits on Dec 19, 2023

• update install docs and checkout htslib 1.19

  brentp

  committed
  54a9994

• ci workflows support new split htslib. support new wheel. suport windows build

  

  graphenn

  authored and

  brentp

  committed
  d2a39e8

• fix realloc memory on python object issue. fix call python-space function at cython space issue.

  

  graphenn

  authored and

  brentp

  committed
  d32bf86

• add build wheel for new split build arch, add musllinux support

  

  graphenn

  authored and

  brentp

  committed
  7dba306

• oldest-supported-numpy should be used at builing stage

  

  graphenn

  authored and

  brentp

  committed
  8874a58

• add ci workflows for sdist

  

  graphenn

  authored and

  brentp

  committed
  8d10741

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