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Pipeline_Scomatic
Pipeline_Scomatic PublicNextflow pipeline for performing somatic variant calling on single cell RNA-seq data using SComatic
Nextflow
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Pipeline_Cellbender
Pipeline_Cellbender PublicSmall pipeline for running cellbender. Takes a 2 column csv file of: paths to raw h5 files output from cellranger count (header: h5path) and sample names (header: sample), runs cellbender and then …
Nextflow
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